BLASTX nr result

ID: Coptis21_contig00010295 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010295
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_199152.1| uncharacterized protein [Arabidopsis thaliana] ...    69   4e-10
ref|XP_002863659.1| hypothetical protein ARALYDRAFT_494659 [Arab...    68   7e-10
ref|XP_003614127.1| hypothetical protein MTR_5g045160 [Medicago ...    67   1e-09
emb|CAN69580.1| hypothetical protein VITISV_044180 [Vitis vinifera]    67   2e-09
ref|XP_004172720.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    64   1e-08

>ref|NP_199152.1| uncharacterized protein [Arabidopsis thaliana]
           gi|8843892|dbj|BAA97418.1| unnamed protein product
           [Arabidopsis thaliana] gi|71905593|gb|AAZ52774.1|
           hypothetical protein At5g43390 [Arabidopsis thaliana]
           gi|91805687|gb|ABE65572.1| hypothetical protein
           At5g43390 [Arabidopsis thaliana]
           gi|332007572|gb|AED94955.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 643

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 30/37 (81%), Positives = 32/37 (86%)
 Frame = -1

Query: 112 PTKGLTETCSPTFLTTGNPCLDFFFHILPDTPSQDLI 2
           P  GLTE  SPTFLT+GNPCLDFFFHI+PDTPS DLI
Sbjct: 40  PQMGLTENFSPTFLTSGNPCLDFFFHIVPDTPSDDLI 76


>ref|XP_002863659.1| hypothetical protein ARALYDRAFT_494659 [Arabidopsis lyrata subsp.
           lyrata] gi|297309494|gb|EFH39918.1| hypothetical protein
           ARALYDRAFT_494659 [Arabidopsis lyrata subsp. lyrata]
          Length = 648

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 29/37 (78%), Positives = 33/37 (89%)
 Frame = -1

Query: 112 PTKGLTETCSPTFLTTGNPCLDFFFHILPDTPSQDLI 2
           P  GLTE  SPTFL++GNPCLDFFFHI+PDTPS+DLI
Sbjct: 42  PRMGLTENFSPTFLSSGNPCLDFFFHIVPDTPSEDLI 78


>ref|XP_003614127.1| hypothetical protein MTR_5g045160 [Medicago truncatula]
           gi|355515462|gb|AES97085.1| hypothetical protein
           MTR_5g045160 [Medicago truncatula]
          Length = 729

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 33/65 (50%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
 Frame = -1

Query: 187 TATTTMSSNQ---SSDVDSIPDDPMDAVPTKGLTETCSPTFLTTGNPCLDFFFHILPDTP 17
           T TTT ++N       V +      +  P  GLTE  SPTFL+TGNPCLDFFFH++PDTP
Sbjct: 33  TVTTTTTTNDVFLDQMVANFNSLGRNRNPPMGLTENMSPTFLSTGNPCLDFFFHVVPDTP 92

Query: 16  SQDLI 2
           S+ L+
Sbjct: 93  SETLV 97


>emb|CAN69580.1| hypothetical protein VITISV_044180 [Vitis vinifera]
          Length = 624

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 28/37 (75%), Positives = 32/37 (86%)
 Frame = -1

Query: 112 PTKGLTETCSPTFLTTGNPCLDFFFHILPDTPSQDLI 2
           P  GLTE  SPTFL++GNPCLDFFFH++PDTPS DLI
Sbjct: 48  PPMGLTENKSPTFLSSGNPCLDFFFHVVPDTPSDDLI 84


>ref|XP_004172720.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein L728-like
           [Cucumis sativus]
          Length = 638

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 26/40 (65%), Positives = 32/40 (80%)
 Frame = -1

Query: 121 DAVPTKGLTETCSPTFLTTGNPCLDFFFHILPDTPSQDLI 2
           D++P  G TE  S TFL+TGNPCLDFFFH++PDTP+  LI
Sbjct: 46  DSLPPMGFTENMSATFLSTGNPCLDFFFHVVPDTPASSLI 85


Top