BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010293
         (1683 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280414.1| PREDICTED: adoMet-dependent rRNA methyltrans...   361   e-116
ref|XP_003540678.1| PREDICTED: adoMet-dependent rRNA methyltrans...   344   e-111
ref|XP_003537870.1| PREDICTED: adoMet-dependent rRNA methyltrans...   338   e-109
ref|XP_002512920.1| ribosomal RNA methyltransferase, putative [R...   338   e-109
ref|XP_002313039.1| predicted protein [Populus trichocarpa] gi|2...   341   e-108

>ref|XP_002280414.1| PREDICTED: adoMet-dependent rRNA methyltransferase spb1 [Vitis
            vinifera]
          Length = 842

 Score =  361 bits (926), Expect(2) = e-116
 Identities = 214/429 (49%), Positives = 278/429 (64%), Gaps = 7/429 (1%)
 Frame = +1

Query: 373  KVVDALRGTKQKKQRNGYEDGVSLLRKVCLALDFVRSRSPDDI-GSFISISFDDPSCLLI 549
            KVVD LRGTKQK+ R+GYEDG + LRKV  A +F+ S +P +I GS  SISFDDP+ L I
Sbjct: 226  KVVDVLRGTKQKRHRDGYEDGDTTLRKVSSATNFIWSDTPLEILGSVTSISFDDPASLPI 285

Query: 550  KEHSLTTEEIKILCDDLEVLAEKDRKCLLKWRNEVRKALYPTQ---STVKVDDVPXXXXX 720
            K+H+LTTEE+K LCDDL VL ++D K LLKWR  VRKAL P Q   ST   DD       
Sbjct: 286  KDHALTTEEVKTLCDDLRVLGKQDFKHLLKWRMHVRKALSPVQKATSTAAEDD------- 338

Query: 721  XXXXXXXXXXXXXXXILNEMEELTYAIDRKKKREKKMLARRLAKEKCRGATGMQIDALMD 900
                           +LNEMEELTYA++RKKKR KK+LA+R AK+K R  TGMQ+DAL +
Sbjct: 339  -----HEKVVDEDERMLNEMEELTYAMERKKKRTKKLLAKRQAKDKARKVTGMQVDALEE 393

Query: 901  GYTDLELFSLSSIKRKRDLNAVNSSEFIDEKGAVGDSDNEVAGENPKDSFSDVDSEEEHR 1080
            GYTD ELFSLSSIK K+DL AVNS+E+ +  G V   D     E  + S SD+DS+EE R
Sbjct: 394  GYTDHELFSLSSIKAKKDLLAVNSTEYDEGDGVVDSEDERTREETQEHSASDMDSDEERR 453

Query: 1081 QYDMQLEELLDSQYQQFVTRTYGTAHLRKRAKMAYAENSMKLLEGGEAEGIVDSVHDSDI 1260
            +YD Q+EE+LD  Y+QFV R  G+   RKRA+  ++E+   LLE G+ + I+ S HDSD 
Sbjct: 454  RYDEQMEEMLDQVYEQFVARREGSTKQRKRARKKHSEDD--LLEDGD-DDIIHSDHDSDN 510

Query: 1261 E-EVDSEVNPLMVSFHDQEQPNKEEMMEKWFSQDMFADLQEQ-LLVKNDSGDEME-DIQE 1431
            + + D E NPLMV  H +E P + E+ +KWFSQD+FA+  E+  L K++S DEME D QE
Sbjct: 511  DNQADLEANPLMVPLHGEEMPTQREITDKWFSQDIFAEAAEEGDLGKHESEDEMEVDRQE 570

Query: 1432 EKHSLPKEIKESMIQLRANYSCLSQSQAPRDEGDFEVVPSPATXXXXXXXXXXXXXXXXX 1611
            +  S+PK+ KE+  +  +  +   Q +A + E DFE+VP+P+T                 
Sbjct: 571  KTLSIPKKAKENKARKPSEIN-PPQIEASKAEEDFEIVPAPSTDSSDDSSSDESDDEDIH 629

Query: 1612 XKAEMLACA 1638
             KAE+LACA
Sbjct: 630  AKAEILACA 638



 Score = 87.0 bits (214), Expect(2) = e-116
 Identities = 41/67 (61%), Positives = 51/67 (76%)
 Frame = +2

Query: 176 IFRS*DYNAVIFCLKELFEIVDVTKPLASR*VSVEIYVVARNYKAPGKIDPRLLGVNHLF 355
           +FRS DYN+V++CLK+LFE V+V KP ASR  S EI+V+   YKAP KIDPRLL V HLF
Sbjct: 159 VFRSQDYNSVLYCLKQLFEKVEVDKPAASRSTSAEIFVLGLKYKAPAKIDPRLLDVKHLF 218

Query: 356 KRDVAPR 376
           +  + PR
Sbjct: 219 QGTIEPR 225


>ref|XP_003540678.1| PREDICTED: adoMet-dependent rRNA methyltransferase spb1-like [Glycine
            max]
          Length = 834

 Score =  344 bits (883), Expect(2) = e-111
 Identities = 201/402 (50%), Positives = 269/402 (66%), Gaps = 5/402 (1%)
 Frame = +1

Query: 370  PKVVDALRGTKQKKQRNGYEDGVSLLRKVCLALDFVRSRSPDDI-GSFISISFDDPSCLL 546
            PKVVD LR TKQK+ R+GYEDG + LRKV  A +F+ S SP +I GS  SI+F DP+  L
Sbjct: 226  PKVVDVLRDTKQKRHRDGYEDGNTTLRKVSSAANFIWSNSPLEILGSVTSITFTDPADSL 285

Query: 547  IKEHSLTTEEIKILCDDLEVLAEKDRKCLLKWRNEVRKALYPTQSTVKVDDVPXXXXXXX 726
            IK+H LT+EE+K LCDDL VL ++D K LLKWR +VRKAL PTQ        P       
Sbjct: 286  IKDHDLTSEEVKSLCDDLRVLGKQDFKHLLKWRIQVRKALSPTQK-------PDSTTTEL 338

Query: 727  XXXXXXXXXXXXXILNEMEELTYAIDRKKKREKKMLARRLAKEKCRGATGMQIDALMDGY 906
                         ILNEMEELTY +DRKKKR KK+LA+R AK+K R ATGMQ+DA+ DGY
Sbjct: 339  MDNEPKVVDEEDRILNEMEELTYVMDRKKKRAKKLLAKRRAKDKARKATGMQMDAIDDGY 398

Query: 907  TDLELFSLSSIKRKRDLNAVNSSEFIDEKGAVGDSDNEVAGE-NPKDSFSDV-DSEEEHR 1080
             D ELF+LSSIK K+DL AV+++E+  ++G V DS+NE   E  P+ S SD+ DS+EE +
Sbjct: 399  VDQELFALSSIKGKKDLVAVDNTEYEGDEGEVEDSENEETHEGRPEHSSSDLEDSDEERK 458

Query: 1081 QYDMQLEELLDSQYQQFVTRTYGTAHLRKRAKMAYAENSMKLLEGGEAEGIVDSVHDSDI 1260
            +Y+ Q+E+L+D  Y++FV R  G+A  RKR K +Y +   +LLEGGE + IV S +DSD 
Sbjct: 459  RYNEQMEDLMDQAYERFVIRKEGSAKQRKRIKKSY-DAKAQLLEGGEDDDIVQSKYDSDE 517

Query: 1261 EEVDSEVNPLMVSFHDQEQPNKEEMMEKWFSQDMFADLQEQ-LLVKNDSGDEME-DIQEE 1434
            ++ D E NPLMV  +D+ +  +EE+M KWFSQD+FA+  E+    K++S DEM+ D  +E
Sbjct: 518  DQGDQEANPLMVPLNDEAELTQEEIMNKWFSQDVFAEAAEEGDFKKDESKDEMDIDEPKE 577

Query: 1435 KHSLPKEIKESMIQLRANYSCLSQSQAPRDEGDFEVVPSPAT 1560
            K S+ K++KE+     A  +   Q Q  +   DFE+VP+P T
Sbjct: 578  KISIAKKVKENKTAAPA-VATHPQPQPSKAGDDFEIVPAPDT 618



 Score = 85.9 bits (211), Expect(2) = e-111
 Identities = 42/67 (62%), Positives = 51/67 (76%)
 Frame = +2

Query: 176 IFRS*DYNAVIFCLKELFEIVDVTKPLASR*VSVEIYVVARNYKAPGKIDPRLLGVNHLF 355
           IFRS DY++V++CLK+LFE V+V KP ASR  S EIYV+   YKAP KIDPRLL V HLF
Sbjct: 159 IFRSQDYSSVVYCLKQLFEKVEVDKPAASRSESAEIYVLGLGYKAPAKIDPRLLDVKHLF 218

Query: 356 KRDVAPR 376
           +  V P+
Sbjct: 219 QGSVEPQ 225


>ref|XP_003537870.1| PREDICTED: adoMet-dependent rRNA methyltransferase spb1-like [Glycine
            max]
          Length = 829

 Score =  338 bits (866), Expect(2) = e-109
 Identities = 197/406 (48%), Positives = 271/406 (66%), Gaps = 9/406 (2%)
 Frame = +1

Query: 370  PKVVDALRGTKQKKQRNGYEDGVSLLRKVCLALDFVRSRSPDDI-GSFISISFDDPSCLL 546
            PKVVD LR +KQK+ R+GYEDG + LRK+  A +F+ S SP +I GS  SI+F DP+   
Sbjct: 226  PKVVDVLRDSKQKRHRDGYEDGDTTLRKLSSAANFIWSNSPLEILGSVTSITFTDPADSP 285

Query: 547  IKEHSLTTEEIKILCDDLEVLAEKDRKCLLKWRNEVRKALYPTQ-----STVKVDDVPXX 711
            IK+H LTTEE+K LCDDL VL ++D K LLKWR ++RKAL PTQ     +T ++ + P  
Sbjct: 286  IKDHDLTTEEVKSLCDDLRVLGKQDFKHLLKWRIQIRKALSPTQKPDSTTTEQMGNEPKV 345

Query: 712  XXXXXXXXXXXXXXXXXXILNEMEELTYAIDRKKKREKKMLARRLAKEKCRGATGMQIDA 891
                              ILNEMEELTY +DRKKKR KK+LA+R AK+K R ATGMQ+DA
Sbjct: 346  DEEDR-------------ILNEMEELTYVMDRKKKRAKKLLAKRRAKDKARKATGMQMDA 392

Query: 892  LMDGYTDLELFSLSSIKRKRDLNAVNSSEFIDEKGAVGDSDNEVAGENPKDSFSDV-DSE 1068
            + DGY D ELF+LSSIK K+DL AV+++E+  ++G + DS+NE   E+P+ S  D+ DS+
Sbjct: 393  IDDGYVDQELFALSSIKGKKDLVAVDNTEYEGDEGELEDSENEETHESPEHSSGDLEDSD 452

Query: 1069 EEHRQYDMQLEELLDSQYQQFVTRTYGTAHLRKRAKMAYAENSMKLLEGGEAEGIVDSVH 1248
            EE ++Y+ Q+E+L+D  Y++FV R  G+A  RKR K +Y +   +LLEGGE + IV S +
Sbjct: 453  EERKRYNEQMEDLMDKAYERFVIRKEGSAKQRKRIKKSY-DAKDQLLEGGEDDDIVQSKY 511

Query: 1249 DSDIEEVDSEVNPLMVSFHDQEQPNKEEMMEKWFSQDMFADLQEQ-LLVKNDSGDEME-D 1422
            DSD ++ D E NPLMV  +D  +  +EE+M KWFSQD+FA+  E+    K++S DEM+ D
Sbjct: 512  DSDEDQGDQEANPLMVPLNDGAELTQEEVMNKWFSQDVFAEAAEEGDFEKDESKDEMDID 571

Query: 1423 IQEEKHSLPKEIKESMIQLRANYSCLSQSQAPRDEGDFEVVPSPAT 1560
              +EK S+ K++KE+     A      Q Q  +   DFE+VP+P T
Sbjct: 572  EPKEKISIAKKVKENKTAAPA-VVAHPQPQPSKAADDFEIVPAPDT 616



 Score = 85.9 bits (211), Expect(2) = e-109
 Identities = 42/67 (62%), Positives = 51/67 (76%)
 Frame = +2

Query: 176 IFRS*DYNAVIFCLKELFEIVDVTKPLASR*VSVEIYVVARNYKAPGKIDPRLLGVNHLF 355
           IFRS DY++V++CLK+LFE V+V KP ASR  S EIYV+   YKAP KIDPRLL V HLF
Sbjct: 159 IFRSQDYSSVVYCLKQLFEKVEVDKPAASRSESAEIYVLGLKYKAPAKIDPRLLDVKHLF 218

Query: 356 KRDVAPR 376
           +  V P+
Sbjct: 219 QGSVEPQ 225


>ref|XP_002512920.1| ribosomal RNA methyltransferase, putative [Ricinus communis]
            gi|223547931|gb|EEF49423.1| ribosomal RNA
            methyltransferase, putative [Ricinus communis]
          Length = 828

 Score =  338 bits (867), Expect(2) = e-109
 Identities = 196/399 (49%), Positives = 263/399 (65%), Gaps = 4/399 (1%)
 Frame = +1

Query: 373  KVVDALRGTKQKKQRNGYEDGVSLLRKVCLALDFVRSRSPDDI-GSFISISFDDPSCLLI 549
            KV+D LRG+KQK+ R+GYEDG S++RKV  A DFV S +P +I GS  SI+F+DP+ L +
Sbjct: 227  KVIDVLRGSKQKRHRDGYEDGESIIRKVSSAADFVWSDTPLEILGSVTSIAFEDPASLPL 286

Query: 550  KEHSLTTEEIKILCDDLEVLAEKDRKCLLKWRNEVRKALYPTQSTVKVDDVPXXXXXXXX 729
            ++H+LTTEE+K LCDDL VL ++D K LLKWR  +RKAL P+Q                 
Sbjct: 287  RDHALTTEEVKALCDDLRVLGKQDFKHLLKWRMHIRKALSPSQKATSTTSTDGEEKNVED 346

Query: 730  XXXXXXXXXXXXILNEMEELTYAIDRKKKREKKMLARRLAKEKCRGATGMQIDALMDGYT 909
                        +LNEMEELTYA++RKKK+ KK  A+R AK+K R   G+QIDAL DGY 
Sbjct: 347  EDDK--------LLNEMEELTYAVERKKKQAKKRDAKRRAKDKARKTKGVQIDALEDGYV 398

Query: 910  DLELFSLSSIKRKRDLNAVNSSEFIDEKGAVGDSDNEVAGENPKD-SFSDVDSEEEHRQY 1086
            D ELFSLSSIK K+DL AVNS+E  DE G +GDS+NE   +   + + SD+DS+EE R+Y
Sbjct: 399  DHELFSLSSIKGKKDLVAVNSAE-NDENGELGDSENEEPHDQADEHTSSDLDSDEERRRY 457

Query: 1087 DMQLEELLDSQYQQFVTRTYGTAHLRKRAKMAYAENSMKLLEGGEAEGIVDSVHDSDIEE 1266
            D  LEE LD  Y++FVT+  G+   RKRAK AY+E    L+EG + +  + S +DSD ++
Sbjct: 458  DAHLEEFLDQVYERFVTKREGSTKQRKRAKKAYSE----LMEGDDNDDAMQSDYDSDKDQ 513

Query: 1267 VDSEVNPLMVSFHDQEQPNKEEMMEKWFSQDMFAD-LQEQLLVKNDSGDEME-DIQEEKH 1440
             D EVNPLMV F+D E P +EE+  KWF+QD+FA  +++  L K DS D+M+ D+QE K 
Sbjct: 514  GDEEVNPLMVPFNDGEVPTQEEITNKWFTQDVFAKAVEDGDLEKYDSEDQMQVDMQEGKV 573

Query: 1441 SLPKEIKESMIQLRANYSCLSQSQAPRDEGDFEVVPSPA 1557
            + PK   +  I  +      +Q Q  + E DFE+VP+PA
Sbjct: 574  ASPKNKAKDAIGHKH-----TQHQTSKGEEDFEIVPAPA 607



 Score = 85.1 bits (209), Expect(2) = e-109
 Identities = 41/67 (61%), Positives = 50/67 (74%)
 Frame = +2

Query: 176 IFRS*DYNAVIFCLKELFEIVDVTKPLASR*VSVEIYVVARNYKAPGKIDPRLLGVNHLF 355
           +FRS DYN+VI+CL +LFE V+V KP ASR  S EI+V+   YKAP KIDPRLL V HLF
Sbjct: 159 VFRSQDYNSVIYCLNQLFEKVEVDKPAASRSASAEIFVLGLKYKAPAKIDPRLLDVKHLF 218

Query: 356 KRDVAPR 376
           +  V P+
Sbjct: 219 QGSVEPQ 225


>ref|XP_002313039.1| predicted protein [Populus trichocarpa] gi|222849447|gb|EEE86994.1|
            predicted protein [Populus trichocarpa]
          Length = 840

 Score =  341 bits (875), Expect(2) = e-108
 Identities = 211/435 (48%), Positives = 271/435 (62%), Gaps = 13/435 (2%)
 Frame = +1

Query: 373  KVVDALRGTKQKKQRNGYEDGVSLLRKVCLALDFVRSRSPDDI-GSFISISFDDPSCLLI 549
            KVVD LRGTKQK+ R+GYEDG S++RKV  A DF+ S SP +I GS  SI+FDD   L +
Sbjct: 227  KVVDVLRGTKQKRHRDGYEDGESIVRKVSSAADFIWSDSPLEILGSVTSIAFDDEVSLPL 286

Query: 550  KEHSLTTEEIKILCDDLEVLAEKDRKCLLKWRNEVRKALYPTQSTVKVDDVPXXXXXXXX 729
            ++H LTTEE+K LCDDL VL ++D K LLKWR ++RKAL  +Q                 
Sbjct: 287  RDHDLTTEEVKHLCDDLRVLGKQDFKHLLKWRMQIRKALSSSQKA--------SPSIGKG 338

Query: 730  XXXXXXXXXXXXILNEMEELTYAIDRKKKREKKMLARRLAKEKCRGATG-MQIDALMDGY 906
                        +LNEME+LT A++RKKKREKK+LA+R AK+K R ATG MQIDA  DGY
Sbjct: 339  GEDEKEEDEDDRLLNEMEDLTNAMERKKKREKKLLAKRRAKDKVRKATGGMQIDATADGY 398

Query: 907  TDLELFSLSSIKRKRDLNAVNSSEFIDEKGAVGDSDNEVAG-ENPKDSFSDVDSEEEHRQ 1083
            TDLELFSLSSIK K+DL AV+++++  E G + D +NE    EN + S SDVDS+EE R+
Sbjct: 399  TDLELFSLSSIKGKKDLVAVDAADYDHENGGLRDGENEETDEENQEHSPSDVDSDEERRR 458

Query: 1084 YDMQLEELLDSQYQQFVTRTYGTAHLRKRAKMAYAENSMKLLEGGEAEGIVDSVHDSDIE 1263
            +D Q+EE+LD  Y++FVT+  G+   RKRAK AYAE   +LLEG     IV S +DSD E
Sbjct: 459  FDEQMEEILDQAYERFVTKREGSTKQRKRAKQAYAE---QLLEGDGDNDIVHSDYDSDKE 515

Query: 1264 EVDSEVNPLMVSFHDQEQPNKEEMMEKWFSQDMFADLQE---------QLLVKNDSGDEM 1416
              D E NPLMV F+D E P +EE+  KWF QD+FA   E         + L K +S DEM
Sbjct: 516  TGDHEANPLMVPFNDGEVPTEEEITRKWFDQDIFAKAAEDGDLETAEARNLEKYESEDEM 575

Query: 1417 -EDIQEEKHSLPKEIKESMIQLRANYSCLSQSQAPRDEGDFEVVPSPATXXXXXXXXXXX 1593
              D QE++ + PK+  ++     A  S  +Q  +   E DFE+VP+PAT           
Sbjct: 576  LVDGQEKEIATPKKSAKN-----AAGSDRTQPPSSTAENDFEIVPAPATDSSDDSSSDES 630

Query: 1594 XXXXXXXKAEMLACA 1638
                   KAE+LACA
Sbjct: 631  EDDDVDSKAEILACA 645



 Score = 80.1 bits (196), Expect(2) = e-108
 Identities = 38/67 (56%), Positives = 49/67 (73%)
 Frame = +2

Query: 176 IFRS*DYNAVIFCLKELFEIVDVTKPLASR*VSVEIYVVARNYKAPGKIDPRLLGVNHLF 355
           +FRS DY++VI+CL +LFE V+V KP ASR  S EI+V+   YKAP KIDPRLL + HLF
Sbjct: 159 VFRSQDYSSVIYCLNQLFEKVEVDKPAASRSASAEIFVLGLRYKAPAKIDPRLLDIKHLF 218

Query: 356 KRDVAPR 376
           +    P+
Sbjct: 219 QGSDEPQ 225