BLASTX nr result
ID: Coptis21_contig00010276
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00010276
(920 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264293.1| PREDICTED: ras-related protein RGP1 [Vitis v... 136 9e-91
ref|XP_002513185.1| protein with unknown function [Ricinus commu... 129 1e-84
sp|P25766.2|RGP1_ORYSJ RecName: Full=Ras-related protein RGP1; A... 136 2e-84
ref|XP_002459958.1| hypothetical protein SORBIDRAFT_02g018890 [S... 139 2e-84
gb|AFK37481.1| unknown [Medicago truncatula] 132 3e-83
>ref|XP_002264293.1| PREDICTED: ras-related protein RGP1 [Vitis vinifera]
gi|297736218|emb|CBI24856.3| unnamed protein product
[Vitis vinifera]
Length = 226
Score = 136 bits (343), Expect(3) = 9e-91
Identities = 66/73 (90%), Positives = 71/73 (97%)
Frame = +2
Query: 107 MSNLYGGDFNQKIDYVFKIVLIGDSAVGKSQLLARFSRNEFNLDSKATIGVEFQTRTLVI 286
MSN Y GD++QKIDYVFK+VLIGDSAVGKSQLLARF+RNEFNLDSKATIGVEFQT+TLVI
Sbjct: 1 MSNFYKGDYSQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTKTLVI 60
Query: 287 DHKTVKAQIWDTA 325
DHKTVKAQIWDTA
Sbjct: 61 DHKTVKAQIWDTA 73
Score = 134 bits (338), Expect(3) = 9e-91
Identities = 64/71 (90%), Positives = 70/71 (98%)
Frame = +1
Query: 397 SAYYRGAVGAMLVYDMTKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLGTLRSVSTE 576
SAYYRGAVGAMLVYD+TKRQSFDHVARWL+ELRGHADKNIVIML+GNKSDLGTL++V TE
Sbjct: 83 SAYYRGAVGAMLVYDITKRQSFDHVARWLQELRGHADKNIVIMLVGNKSDLGTLQAVPTE 142
Query: 577 DAKEFAQRENL 609
DAKEFA+RENL
Sbjct: 143 DAKEFAERENL 153
Score = 111 bits (277), Expect(3) = 9e-91
Identities = 58/72 (80%), Positives = 66/72 (91%), Gaps = 2/72 (2%)
Frame = +3
Query: 678 FMETSALEATNVETAFLTVLTEIYRIISKKSLVANE--ESGGNSSLLKGTKIVVPGQEPE 851
FMETSALEATNVETAFL+VLTEIYRIISKK+LVANE ESGGNSSLLKGTKI+VPG+EP+
Sbjct: 155 FMETSALEATNVETAFLSVLTEIYRIISKKTLVANEEVESGGNSSLLKGTKIIVPGKEPK 214
Query: 852 AAKTKPMCCVSS 887
+ +K CC+SS
Sbjct: 215 SEGSKYNCCLSS 226
>ref|XP_002513185.1| protein with unknown function [Ricinus communis]
gi|223547683|gb|EEF49176.1| protein with unknown
function [Ricinus communis]
Length = 223
Score = 129 bits (324), Expect(3) = 1e-84
Identities = 65/73 (89%), Positives = 70/73 (95%)
Frame = +2
Query: 107 MSNLYGGDFNQKIDYVFKIVLIGDSAVGKSQLLARFSRNEFNLDSKATIGVEFQTRTLVI 286
MSNL +FNQKIDYVFKIVLIGDSAVGKSQLLARF+RNEFNLDSKATIGVEFQT+T+V+
Sbjct: 1 MSNLQA-NFNQKIDYVFKIVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTKTIVV 59
Query: 287 DHKTVKAQIWDTA 325
DHKTVKAQIWDTA
Sbjct: 60 DHKTVKAQIWDTA 72
Score = 124 bits (311), Expect(3) = 1e-84
Identities = 60/71 (84%), Positives = 66/71 (92%)
Frame = +1
Query: 397 SAYYRGAVGAMLVYDMTKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLGTLRSVSTE 576
SAYYRGAVGAMLVYD+TKRQSFDHVA+WLEELR HAD NIVIML+GNKSDL +LR+V E
Sbjct: 82 SAYYRGAVGAMLVYDITKRQSFDHVAKWLEELREHADNNIVIMLVGNKSDLESLRAVPIE 141
Query: 577 DAKEFAQRENL 609
DAKEFAQ+ENL
Sbjct: 142 DAKEFAQKENL 152
Score = 108 bits (269), Expect(3) = 1e-84
Identities = 52/70 (74%), Positives = 60/70 (85%)
Frame = +3
Query: 678 FMETSALEATNVETAFLTVLTEIYRIISKKSLVANEESGGNSSLLKGTKIVVPGQEPEAA 857
FMETSALEATNVE+AF++VLTEIYR++SKKSLVAN+E GGN+SLLKG KIV+PGQEPE
Sbjct: 154 FMETSALEATNVESAFISVLTEIYRVVSKKSLVANDEYGGNNSLLKGNKIVIPGQEPEMQ 213
Query: 858 KTKPMCCVSS 887
T CC S
Sbjct: 214 ATNSSCCSRS 223
>sp|P25766.2|RGP1_ORYSJ RecName: Full=Ras-related protein RGP1; AltName: Full=GTP-binding
regulatory protein RGP1 gi|50251643|dbj|BAD29646.1|
putative ras-related GTP-binding protein [Oryza sativa
Japonica Group] gi|222641214|gb|EEE69346.1| hypothetical
protein OsJ_28668 [Oryza sativa Japonica Group]
Length = 226
Score = 136 bits (343), Expect(3) = 2e-84
Identities = 67/71 (94%), Positives = 69/71 (97%)
Frame = +1
Query: 397 SAYYRGAVGAMLVYDMTKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLGTLRSVSTE 576
SAYYRGAVGAMLVYD+TKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLGTLR V TE
Sbjct: 85 SAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLGTLRVVPTE 144
Query: 577 DAKEFAQRENL 609
DAKEFA+RENL
Sbjct: 145 DAKEFAERENL 155
Score = 119 bits (297), Expect(3) = 2e-84
Identities = 59/67 (88%), Positives = 63/67 (94%)
Frame = +2
Query: 125 GDFNQKIDYVFKIVLIGDSAVGKSQLLARFSRNEFNLDSKATIGVEFQTRTLVIDHKTVK 304
G+ QKIDYVFK+VLIGDSAVGKSQLLARF+RNEFNLDSKATIGVEFQTRTL ID +TVK
Sbjct: 9 GEVGQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVK 68
Query: 305 AQIWDTA 325
AQIWDTA
Sbjct: 69 AQIWDTA 75
Score = 105 bits (263), Expect(3) = 2e-84
Identities = 57/71 (80%), Positives = 62/71 (87%), Gaps = 2/71 (2%)
Frame = +3
Query: 678 FMETSALEATNVETAFLTVLTEIYRIISKKSLVANEE--SGGNSSLLKGTKIVVPGQEPE 851
FMETSALE+TNVE AF+TVLTEIYRI+SKK+LVANEE S GNSSLLKGTKIVVPGQEP
Sbjct: 157 FMETSALESTNVENAFMTVLTEIYRIVSKKNLVANEEVDSSGNSSLLKGTKIVVPGQEP- 215
Query: 852 AAKTKPMCCVS 884
A TK CC+S
Sbjct: 216 APPTKASCCMS 226
>ref|XP_002459958.1| hypothetical protein SORBIDRAFT_02g018890 [Sorghum bicolor]
gi|241923335|gb|EER96479.1| hypothetical protein
SORBIDRAFT_02g018890 [Sorghum bicolor]
Length = 226
Score = 139 bits (351), Expect(3) = 2e-84
Identities = 68/71 (95%), Positives = 71/71 (100%)
Frame = +1
Query: 397 SAYYRGAVGAMLVYDMTKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLGTLRSVSTE 576
SAYYRGAVGAMLVYD+TKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLGTLRSV+TE
Sbjct: 84 SAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLGTLRSVATE 143
Query: 577 DAKEFAQRENL 609
DAKEFA+RENL
Sbjct: 144 DAKEFAERENL 154
Score = 118 bits (295), Expect(3) = 2e-84
Identities = 58/67 (86%), Positives = 63/67 (94%)
Frame = +2
Query: 125 GDFNQKIDYVFKIVLIGDSAVGKSQLLARFSRNEFNLDSKATIGVEFQTRTLVIDHKTVK 304
G+ Q+IDYVFK+VLIGDSAVGKSQLLARF+RNEFNLDSKATIGVEFQTRTL ID +TVK
Sbjct: 8 GELGQRIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLNIDARTVK 67
Query: 305 AQIWDTA 325
AQIWDTA
Sbjct: 68 AQIWDTA 74
Score = 103 bits (256), Expect(3) = 2e-84
Identities = 55/72 (76%), Positives = 61/72 (84%), Gaps = 2/72 (2%)
Frame = +3
Query: 678 FMETSALEATNVETAFLTVLTEIYRIISKKSLVANEE--SGGNSSLLKGTKIVVPGQEPE 851
FMETSALEA NVE AF+TVLTEIYR++SKK+LVANEE S GNSSLLKGTKIVVPGQEP
Sbjct: 156 FMETSALEAVNVENAFMTVLTEIYRVVSKKNLVANEESDSSGNSSLLKGTKIVVPGQEPP 215
Query: 852 AAKTKPMCCVSS 887
+K CC+SS
Sbjct: 216 PT-SKATCCMSS 226
>gb|AFK37481.1| unknown [Medicago truncatula]
Length = 223
Score = 132 bits (332), Expect(3) = 3e-83
Identities = 64/71 (90%), Positives = 68/71 (95%)
Frame = +1
Query: 397 SAYYRGAVGAMLVYDMTKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLGTLRSVSTE 576
SAYYRGAVGAMLVYDMTKRQSFDH+ARWLEELRGHAD NIVIMLIGNK DLGTL++V TE
Sbjct: 82 SAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADTNIVIMLIGNKCDLGTLKAVPTE 141
Query: 577 DAKEFAQRENL 609
DA+EFAQRENL
Sbjct: 142 DAQEFAQRENL 152
Score = 131 bits (329), Expect(3) = 3e-83
Identities = 65/73 (89%), Positives = 72/73 (98%)
Frame = +2
Query: 107 MSNLYGGDFNQKIDYVFKIVLIGDSAVGKSQLLARFSRNEFNLDSKATIGVEFQTRTLVI 286
MSNLYG D+NQKIDYVFK+VLIGDSAVGK+QLLARFSRN+FN+DSKATIGVEFQT+TLVI
Sbjct: 1 MSNLYG-DYNQKIDYVFKVVLIGDSAVGKTQLLARFSRNQFNVDSKATIGVEFQTKTLVI 59
Query: 287 DHKTVKAQIWDTA 325
D+KTVKAQIWDTA
Sbjct: 60 DNKTVKAQIWDTA 72
Score = 94.0 bits (232), Expect(3) = 3e-83
Identities = 47/69 (68%), Positives = 57/69 (82%), Gaps = 2/69 (2%)
Frame = +3
Query: 678 FMETSALEATNVETAFLTVLTEIYRIISKKSLVANEES--GGNSSLLKGTKIVVPGQEPE 851
FMETSALE+TNVETAFLT+LTEIYR+ISKK+L AN+E+ GG S LLKGT+I+VP Q+
Sbjct: 154 FMETSALESTNVETAFLTILTEIYRLISKKTLTANDEADPGGGSGLLKGTRIIVPNQDAS 213
Query: 852 AAKTKPMCC 878
A + K CC
Sbjct: 214 AYEKKGGCC 222