BLASTX nr result

ID: Coptis21_contig00010273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010273
         (1278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525113.1| PREDICTED: uridylate kinase-like [Glycine max]    461   e-127
ref|XP_002883143.1| aspartate/glutamate/uridylate kinase family ...   458   e-126
ref|XP_002281894.1| PREDICTED: uridylate kinase-like [Vitis vini...   456   e-126
ref|NP_188498.1| uridylate kinase [Arabidopsis thaliana] gi|9293...   454   e-125
ref|XP_003531406.1| PREDICTED: uridylate kinase-like [Glycine max]    452   e-125

>ref|XP_003525113.1| PREDICTED: uridylate kinase-like [Glycine max]
          Length = 331

 Score =  461 bits (1185), Expect = e-127
 Identities = 245/317 (77%), Positives = 273/317 (86%), Gaps = 3/317 (0%)
 Frame = -2

Query: 1277 SSSSSCLFPCKLLPN---VLKKTSTHGRMLVLKCSSSENGSMPADPINLRHPYISGNLTS 1107
            S S  CL P  L P+    +  +++H   L ++ S SE GS P +PIN R P I  +++ 
Sbjct: 18   SPSPLCL-PKPLFPSFTLTVGNSTSHTTSLAVRSSYSEMGSSP-EPINFRKPGIP-SMSH 74

Query: 1106 FNFTTDEAANSKQSYKWRRVLLKVSGEALAGDQAQNIDPKITMSIAREVASVIRLGVEVA 927
               + +E+  SK S+KWRRVLLKVSGEALAGD +QNIDPKITM+IAREVA+V RLG+EVA
Sbjct: 75   LRLSMNES--SKPSFKWRRVLLKVSGEALAGDHSQNIDPKITMAIAREVAAVTRLGIEVA 132

Query: 926  IVVGGGNIFRGASWAGCSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMS 747
            +VVGGGNIFRG+SWAG SGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMS
Sbjct: 133  LVVGGGNIFRGSSWAGSSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMS 192

Query: 746  EVAEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVF 567
            EVAEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVF
Sbjct: 193  EVAEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVF 252

Query: 566  DDDPRRNPNACLLDTLSYSDVTSRDLSVMDMTAITLCQENNIPVVVFNLNKPGNISKAIK 387
            D+DP+RNP A L +TL+Y +VTS+DLSVMDMTAITLCQENNIPVVVFNLNKPGNI KAIK
Sbjct: 253  DEDPKRNPQARLHETLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNKPGNIEKAIK 312

Query: 386  GERVGTLIGGTWNSTVA 336
            GERVGTLIG TWNSTV+
Sbjct: 313  GERVGTLIGATWNSTVS 329


>ref|XP_002883143.1| aspartate/glutamate/uridylate kinase family protein [Arabidopsis
            lyrata subsp. lyrata] gi|297830524|ref|XP_002883144.1|
            aspartate/glutamate/uridylate kinase family protein
            [Arabidopsis lyrata subsp. lyrata]
            gi|297328983|gb|EFH59402.1| aspartate/glutamate/uridylate
            kinase family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297328984|gb|EFH59403.1| aspartate/glutamate/uridylate
            kinase family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 334

 Score =  458 bits (1179), Expect = e-126
 Identities = 234/289 (80%), Positives = 255/289 (88%)
 Frame = -2

Query: 1205 RMLVLKCSSSENGSMPADPINLRHPYISGNLTSFNFTTDEAANSKQSYKWRRVLLKVSGE 1026
            R +++ CSSS+NGS P       +       TSF         SK   KWRRVLLKVSGE
Sbjct: 42   RRVLISCSSSDNGSSPDSMNGSGNGSSLNGQTSFPRMPSFDGASKPPLKWRRVLLKVSGE 101

Query: 1025 ALAGDQAQNIDPKITMSIAREVASVIRLGVEVAIVVGGGNIFRGASWAGCSGLDRSSADY 846
            ALAGD+ QNIDPK+TM+IAREVA+V RLG+EVAIVVGGGNIFRG++WAGCSGLDRSSADY
Sbjct: 102  ALAGDEEQNIDPKVTMAIAREVAAVTRLGIEVAIVVGGGNIFRGSTWAGCSGLDRSSADY 161

Query: 845  IGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIFAAGT 666
            IGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRA+RHLEKGRVVIFAAGT
Sbjct: 162  IGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAIRHLEKGRVVIFAAGT 221

Query: 665  GNPFFTTDTAAALRCAEINAEVVLKATNVDGVFDDDPRRNPNACLLDTLSYSDVTSRDLS 486
            GNPFFTTDTAAALRCAEINAEVVLKATNVDGVFDDDP+RNPNA LLD+L+Y +VTS+DLS
Sbjct: 222  GNPFFTTDTAAALRCAEINAEVVLKATNVDGVFDDDPKRNPNARLLDSLTYQEVTSKDLS 281

Query: 485  VMDMTAITLCQENNIPVVVFNLNKPGNISKAIKGERVGTLIGGTWNSTV 339
            VMDMTAITLCQENNIPVVVFNL++PGNI+KAIKGERVGTLIGGTWNS V
Sbjct: 282  VMDMTAITLCQENNIPVVVFNLSEPGNIAKAIKGERVGTLIGGTWNSIV 330


>ref|XP_002281894.1| PREDICTED: uridylate kinase-like [Vitis vinifera]
          Length = 332

 Score =  456 bits (1173), Expect = e-126
 Identities = 245/315 (77%), Positives = 266/315 (84%), Gaps = 3/315 (0%)
 Frame = -2

Query: 1271 SSSCLFPCKLLPN---VLKKTSTHGRMLVLKCSSSENGSMPADPINLRHPYISGNLTSFN 1101
            SSS L  C L  N    +    T+GR  V+  SSSE GS+  D +NLR   +S ++T   
Sbjct: 19   SSSLLALCPLKVNHSRAMNYRRTNGRF-VINSSSSEMGSIN-DSMNLRQSQLS-SMTPLG 75

Query: 1100 FTTDEAANSKQSYKWRRVLLKVSGEALAGDQAQNIDPKITMSIAREVASVIRLGVEVAIV 921
             T ++A  SK S KW+RVLLKVSGEALAGD  QNIDPKITM+IAREVASV RLG+EVAIV
Sbjct: 76   VTMNDAGMSKPSCKWQRVLLKVSGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIV 135

Query: 920  VGGGNIFRGASWAGCSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEV 741
            VGGGNIFRG+SWAG  GLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEV
Sbjct: 136  VGGGNIFRGSSWAGSGGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEV 195

Query: 740  AEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVFDD 561
            AEPYIRRRA+RHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVFDD
Sbjct: 196  AEPYIRRRAIRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVFDD 255

Query: 560  DPRRNPNACLLDTLSYSDVTSRDLSVMDMTAITLCQENNIPVVVFNLNKPGNISKAIKGE 381
            DPRRNPNA LLD+L+Y DV SRDLSVMDMTA+TLCQENNIPVVVFN+ K GNIS+AI GE
Sbjct: 256  DPRRNPNARLLDSLTYQDVLSRDLSVMDMTAVTLCQENNIPVVVFNVTKSGNISRAILGE 315

Query: 380  RVGTLIGGTWNSTVA 336
            RVGTL+GG W ST A
Sbjct: 316  RVGTLVGGPWVSTTA 330


>ref|NP_188498.1| uridylate kinase [Arabidopsis thaliana] gi|9293891|dbj|BAB01794.1|
            unnamed protein product [Arabidopsis thaliana]
            gi|15292789|gb|AAK92763.1| putative uridylate kinase
            [Arabidopsis thaliana] gi|20258857|gb|AAM14100.1|
            putative uridylate kinase [Arabidopsis thaliana]
            gi|332642610|gb|AEE76131.1| uridylate kinase [Arabidopsis
            thaliana]
          Length = 339

 Score =  454 bits (1168), Expect = e-125
 Identities = 240/319 (75%), Positives = 265/319 (83%), Gaps = 6/319 (1%)
 Frame = -2

Query: 1277 SSSSSCLFPCKLLPNVLKKTSTHGRMLVLKCSSS---ENGSMPADPINLRHPYISGNL-- 1113
            S S +   P  L          + R +++ CSSS   +NGS P D +N        +L  
Sbjct: 18   SISRTSFVPLTLRNRTFFSNQNYSRRVLISCSSSLSSDNGSSP-DSMNGNGNGNGSSLNG 76

Query: 1112 -TSFNFTTDEAANSKQSYKWRRVLLKVSGEALAGDQAQNIDPKITMSIAREVASVIRLGV 936
             +SF         SK   KWRRVLLKVSGEALAGD+ QNIDPK+TM+IAREVA+V RLG+
Sbjct: 77   QSSFPRLPSFDGTSKPPLKWRRVLLKVSGEALAGDEEQNIDPKVTMAIAREVAAVTRLGI 136

Query: 935  EVAIVVGGGNIFRGASWAGCSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAF 756
            EVAIVVGGGNIFRG++WAGCSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAF
Sbjct: 137  EVAIVVGGGNIFRGSTWAGCSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAF 196

Query: 755  RMSEVAEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVD 576
            RMSEVAEPYIRRRA+RHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVD
Sbjct: 197  RMSEVAEPYIRRRAIRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVD 256

Query: 575  GVFDDDPRRNPNACLLDTLSYSDVTSRDLSVMDMTAITLCQENNIPVVVFNLNKPGNISK 396
            GVFDDDP+RNPNA LLD+L+Y +VTS+DLSVMDMTAITLCQENNIPVVVFNL++PGNI+K
Sbjct: 257  GVFDDDPKRNPNARLLDSLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLSEPGNIAK 316

Query: 395  AIKGERVGTLIGGTWNSTV 339
            AIKGERVGTLIGGTWNS V
Sbjct: 317  AIKGERVGTLIGGTWNSIV 335


>ref|XP_003531406.1| PREDICTED: uridylate kinase-like [Glycine max]
          Length = 325

 Score =  452 bits (1164), Expect = e-125
 Identities = 243/314 (77%), Positives = 267/314 (85%)
 Frame = -2

Query: 1277 SSSSSCLFPCKLLPNVLKKTSTHGRMLVLKCSSSENGSMPADPINLRHPYISGNLTSFNF 1098
            SSS  CL P  L P +    ST     +     SE GS P +PIN R   I  +++    
Sbjct: 17   SSSPLCL-PKPLFPYLTVSNSTFQTTSL--AVRSEMGSSP-EPINFRKSEIP-SMSHLRL 71

Query: 1097 TTDEAANSKQSYKWRRVLLKVSGEALAGDQAQNIDPKITMSIAREVASVIRLGVEVAIVV 918
            + +E+  SK S+KWRRVLLKVSGEALAGD +QNIDPKITM+IAREVA+V RLG+EVA+VV
Sbjct: 72   SMNES--SKPSFKWRRVLLKVSGEALAGDHSQNIDPKITMAIAREVAAVTRLGIEVALVV 129

Query: 917  GGGNIFRGASWAGCSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVA 738
            GGGNIFRG+SWAG SGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVA
Sbjct: 130  GGGNIFRGSSWAGSSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVA 189

Query: 737  EPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVFDDD 558
            EPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVFD+D
Sbjct: 190  EPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVFDED 249

Query: 557  PRRNPNACLLDTLSYSDVTSRDLSVMDMTAITLCQENNIPVVVFNLNKPGNISKAIKGER 378
            P+RNP A L +TL+Y +VTS+DLSVMDMTAITLCQENNIPV+VFNLNKPGNI KAIKGER
Sbjct: 250  PKRNPQARLHETLTYQEVTSKDLSVMDMTAITLCQENNIPVIVFNLNKPGNIEKAIKGER 309

Query: 377  VGTLIGGTWNSTVA 336
            VGTLIG TWNSTV+
Sbjct: 310  VGTLIGATWNSTVS 323


Top