BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010249
         (1070 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19162.3| unnamed protein product [Vitis vinifera]              356   5e-96
gb|ABX80391.1| cryptochrome 1 [Vitis riparia]                         356   5e-96
gb|ABX79355.1| cryptochrome 1 [Vitis vinifera]                        356   5e-96
ref|XP_002285792.1| PREDICTED: cryptochrome-1 [Vitis vinifera]        356   5e-96
ref|XP_002513922.1| DNA photolyase, putative [Ricinus communis] ...   341   2e-91

>emb|CBI19162.3| unnamed protein product [Vitis vinifera]
          Length = 691

 Score =  356 bits (914), Expect = 5e-96
 Identities = 184/264 (69%), Positives = 203/264 (76%), Gaps = 6/264 (2%)
 Frame = -1

Query: 1070 FDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGVELGMNYPLPIVEIGAAKARLQ 891
            FDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAG+ELG NYPLPIVEI AAKARLQ
Sbjct: 419  FDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVEIDAAKARLQ 478

Query: 890  QALGEMWQQEAAWRAAVENGTDEGLGDSFESTPIAFPQDIQMEVDQEPIRNNP-ATVVRR 714
            +AL EMWQ  AA RAA+ENGT+EGLGDS ES PIAFPQD+QME   EP+RNNP  T VRR
Sbjct: 479  EALSEMWQAVAASRAAIENGTEEGLGDS-ESAPIAFPQDVQMEEIPEPVRNNPTTTAVRR 537

Query: 713  YEDQMVPSMTASLQRVEEEPSID-RNSDGNSRAEVPTNTTRNPQPWRETSNLPQTF---- 549
            YEDQMVPSMT+S  R+E EPS+D +NS  NSRAEVPTN   N +P RET N   T     
Sbjct: 538  YEDQMVPSMTSSFLRIEGEPSLDIQNSAENSRAEVPTNVNANQEPRRETLNRGVTHSVRS 597

Query: 548  RNNNTPQFNFNIGVQXXXXXXXXXXXXXXXXRDGGVVPVWSPSISSYSEQFVGEENGLGS 369
             N+N PQFN  IG                  RDGGVVPVWSPS SSY+EQFV EENG+G+
Sbjct: 598  NNHNLPQFNIMIGRNTAEDSTAESSSTTRRERDGGVVPVWSPSTSSYAEQFVSEENGIGT 657

Query: 368  SSTYLQTHPQSHQLFSWRQLSQAG 297
            SS+YLQ HP+SHQL +W+QLSQ G
Sbjct: 658  SSSYLQRHPRSHQLMNWKQLSQTG 681


>gb|ABX80391.1| cryptochrome 1 [Vitis riparia]
          Length = 681

 Score =  356 bits (914), Expect = 5e-96
 Identities = 185/264 (70%), Positives = 205/264 (77%), Gaps = 6/264 (2%)
 Frame = -1

Query: 1070 FDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGVELGMNYPLPIVEIGAAKARLQ 891
            FDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAG+ELG NYPLPIVEI AAKARLQ
Sbjct: 419  FDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVEIDAAKARLQ 478

Query: 890  QALGEMWQQEAAWRAAVENGTDEGLGDSFESTPIAFPQDIQMEVDQEPIRNNP-ATVVRR 714
            +AL EMWQ  AA RAA+ENGT+EGLGDS ES PIAFPQD+QME   EP+RNNP  T VRR
Sbjct: 479  EALSEMWQAVAASRAAIENGTEEGLGDS-ESAPIAFPQDVQMEEIPEPVRNNPTTTAVRR 537

Query: 713  YEDQMVPSMTASLQRVEEEPSID-RNSDGNSRAEVPTNTTRNPQPWRETSN--LPQTFR- 546
            YEDQMVPSMT+S  R+E EPS+D +NS  NSRAEVPTN   N +P RET N  +  T R 
Sbjct: 538  YEDQMVPSMTSSFLRIEGEPSLDIQNSAENSRAEVPTNVNANQEPRRETLNRGVAHTVRS 597

Query: 545  -NNNTPQFNFNIGVQXXXXXXXXXXXXXXXXRDGGVVPVWSPSISSYSEQFVGEENGLGS 369
             N+N PQFN  IG                  RDGGVVPVWSPS SSY+EQFV EENG+G+
Sbjct: 598  NNHNLPQFNIMIGRNTAEDSTAESSSTTRRERDGGVVPVWSPSTSSYAEQFVSEENGIGT 657

Query: 368  SSTYLQTHPQSHQLFSWRQLSQAG 297
            SS+YLQ HP+SHQL +W+QLSQ G
Sbjct: 658  SSSYLQRHPRSHQLMNWKQLSQTG 681


>gb|ABX79355.1| cryptochrome 1 [Vitis vinifera]
          Length = 681

 Score =  356 bits (914), Expect = 5e-96
 Identities = 184/264 (69%), Positives = 203/264 (76%), Gaps = 6/264 (2%)
 Frame = -1

Query: 1070 FDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGVELGMNYPLPIVEIGAAKARLQ 891
            FDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAG+ELG NYPLPIVEI AAKARLQ
Sbjct: 419  FDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVEIDAAKARLQ 478

Query: 890  QALGEMWQQEAAWRAAVENGTDEGLGDSFESTPIAFPQDIQMEVDQEPIRNNP-ATVVRR 714
            +AL EMWQ  AA RAA+ENGT+EGLGDS ES PIAFPQD+QME   EP+RNNP  T VRR
Sbjct: 479  EALSEMWQAVAASRAAIENGTEEGLGDS-ESAPIAFPQDVQMEEIPEPVRNNPTTTAVRR 537

Query: 713  YEDQMVPSMTASLQRVEEEPSID-RNSDGNSRAEVPTNTTRNPQPWRETSNLPQTF---- 549
            YEDQMVPSMT+S  R+E EPS+D +NS  NSRAEVPTN   N +P RET N   T     
Sbjct: 538  YEDQMVPSMTSSFLRIEGEPSLDIQNSAENSRAEVPTNVNANQEPRRETLNRGVTHSVRS 597

Query: 548  RNNNTPQFNFNIGVQXXXXXXXXXXXXXXXXRDGGVVPVWSPSISSYSEQFVGEENGLGS 369
             N+N PQFN  IG                  RDGGVVPVWSPS SSY+EQFV EENG+G+
Sbjct: 598  NNHNLPQFNIMIGRNTAEDSTAESSSTTRRERDGGVVPVWSPSTSSYAEQFVSEENGIGT 657

Query: 368  SSTYLQTHPQSHQLFSWRQLSQAG 297
            SS+YLQ HP+SHQL +W+QLSQ G
Sbjct: 658  SSSYLQRHPRSHQLMNWKQLSQTG 681


>ref|XP_002285792.1| PREDICTED: cryptochrome-1 [Vitis vinifera]
          Length = 681

 Score =  356 bits (914), Expect = 5e-96
 Identities = 184/264 (69%), Positives = 203/264 (76%), Gaps = 6/264 (2%)
 Frame = -1

Query: 1070 FDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGVELGMNYPLPIVEIGAAKARLQ 891
            FDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAG+ELG NYPLPIVEI AAKARLQ
Sbjct: 419  FDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVEIDAAKARLQ 478

Query: 890  QALGEMWQQEAAWRAAVENGTDEGLGDSFESTPIAFPQDIQMEVDQEPIRNNP-ATVVRR 714
            +AL EMWQ  AA RAA+ENGT+EGLGDS ES PIAFPQD+QME   EP+RNNP  T VRR
Sbjct: 479  EALSEMWQAVAASRAAIENGTEEGLGDS-ESAPIAFPQDVQMEEIPEPVRNNPTTTAVRR 537

Query: 713  YEDQMVPSMTASLQRVEEEPSID-RNSDGNSRAEVPTNTTRNPQPWRETSNLPQTF---- 549
            YEDQMVPSMT+S  R+E EPS+D +NS  NSRAEVPTN   N +P RET N   T     
Sbjct: 538  YEDQMVPSMTSSFLRIEGEPSLDIQNSAENSRAEVPTNVNANQEPRRETLNRGVTHSVRS 597

Query: 548  RNNNTPQFNFNIGVQXXXXXXXXXXXXXXXXRDGGVVPVWSPSISSYSEQFVGEENGLGS 369
             N+N PQFN  IG                  RDGGVVPVWSPS SSY+EQFV EENG+G+
Sbjct: 598  NNHNLPQFNIMIGRNTAEDSTAESSSTTRRERDGGVVPVWSPSTSSYAEQFVSEENGIGT 657

Query: 368  SSTYLQTHPQSHQLFSWRQLSQAG 297
            SS+YLQ HP+SHQL +W+QLSQ G
Sbjct: 658  SSSYLQRHPRSHQLMNWKQLSQTG 681


>ref|XP_002513922.1| DNA photolyase, putative [Ricinus communis]
            gi|223547008|gb|EEF48505.1| DNA photolyase, putative
            [Ricinus communis]
          Length = 660

 Score =  341 bits (874), Expect = 2e-91
 Identities = 172/260 (66%), Positives = 196/260 (75%), Gaps = 2/260 (0%)
 Frame = -1

Query: 1070 FDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGVELGMNYPLPIVEIGAAKARLQ 891
            FDP+GEYVRRWLPELARLPTEWIHHPWNAPESVLQAAG+ELG NYPLPIV I AAK RLQ
Sbjct: 402  FDPHGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGIDAAKVRLQ 461

Query: 890  QALGEMWQQEAAWRAAVENGTDEGLGDSFESTPIAFPQDIQMEVDQEPIRNNPATVVRRY 711
            +AL EMWQ EAA RAA+ENGT+EGLGDS ES PIAFPQDIQME + EPIRNNP   +RRY
Sbjct: 462  EALSEMWQHEAASRAAIENGTEEGLGDSSESAPIAFPQDIQMEENLEPIRNNPPIPIRRY 521

Query: 710  EDQMVPSMTASLQRVEEEPSID--RNSDGNSRAEVPTNTTRNPQPWRETSNLPQTFRNNN 537
            EDQMVPSMT+SL RVEEE +    RN+  +SRAEVP +   N Q  R    + Q FR+NN
Sbjct: 522  EDQMVPSMTSSLLRVEEEETSSDLRNAAEDSRAEVPRDVNVN-QEQRRNLGVAQAFRSNN 580

Query: 536  TPQFNFNIGVQXXXXXXXXXXXXXXXXRDGGVVPVWSPSISSYSEQFVGEENGLGSSSTY 357
             P  N   G+                 RDGG+VPVWSP  +SYSEQF G+ENG+G+SS+Y
Sbjct: 581  LPNVNILRGLPNTEDSTAESSSSTRRERDGGIVPVWSPPSTSYSEQFAGDENGIGTSSSY 640

Query: 356  LQTHPQSHQLFSWRQLSQAG 297
            LQ HPQSHQ+ +WR+LSQ G
Sbjct: 641  LQRHPQSHQIINWRRLSQTG 660