BLASTX nr result

ID: Coptis21_contig00010236 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010236
         (714 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521019.1| protein transporter, putative [Ricinus commu...   163   4e-38
ref|XP_002307637.1| predicted protein [Populus trichocarpa] gi|2...   162   8e-38
ref|XP_002262985.1| PREDICTED: bet1-like SNARE 1-1 [Vitis vinife...   161   1e-37
gb|AFW74080.1| BS14b [Zea mays]                                       161   1e-37
ref|NP_001150579.1| LOC100284212 [Zea mays] gi|195640340|gb|ACG3...   161   1e-37

>ref|XP_002521019.1| protein transporter, putative [Ricinus communis]
           gi|223539856|gb|EEF41436.1| protein transporter,
           putative [Ricinus communis]
          Length = 125

 Score =  163 bits (412), Expect = 4e-38
 Identities = 81/98 (82%), Positives = 92/98 (93%), Gaps = 1/98 (1%)
 Frame = -1

Query: 567 REYRRNRNALFDGIEEGGIRATS-YSHEIDEQDNDRALDGLQDRVILLKRLSGDINEEVE 391
           R+ R +R ALFDGIEEGGIRA+S YSHEIDEQDN+RA++GLQDRVILLKRLSGDI+EEVE
Sbjct: 8   RDVRTSRTALFDGIEEGGIRASSSYSHEIDEQDNERAMEGLQDRVILLKRLSGDIHEEVE 67

Query: 390 THNRLLDRTGNEMDASRGILSGTMDRFKMVFETKSSRR 277
            HNR+LDR GN+MD+SRG+LSGTMDRFKMVFETKSSRR
Sbjct: 68  GHNRMLDRMGNDMDSSRGVLSGTMDRFKMVFETKSSRR 105


>ref|XP_002307637.1| predicted protein [Populus trichocarpa] gi|222857086|gb|EEE94633.1|
           predicted protein [Populus trichocarpa]
          Length = 123

 Score =  162 bits (409), Expect = 8e-38
 Identities = 82/103 (79%), Positives = 91/103 (88%), Gaps = 2/103 (1%)
 Frame = -1

Query: 579 MQEAREYRRNRNALFDGIEEGGIRATSY--SHEIDEQDNDRALDGLQDRVILLKRLSGDI 406
           M   R+ R NR ALFDGIEEGGIRA+S   SHEIDEQDN+RAL+GLQDRVILLKRLSGDI
Sbjct: 1   MNSRRDIRNNRAALFDGIEEGGIRASSSYSSHEIDEQDNERALEGLQDRVILLKRLSGDI 60

Query: 405 NEEVETHNRLLDRTGNEMDASRGILSGTMDRFKMVFETKSSRR 277
           NEEV+ HN +LDR GN+MD+SRG+LSGTMDRFKMVFETKSSRR
Sbjct: 61  NEEVDNHNLMLDRMGNDMDSSRGVLSGTMDRFKMVFETKSSRR 103


>ref|XP_002262985.1| PREDICTED: bet1-like SNARE 1-1 [Vitis vinifera]
           gi|297744115|emb|CBI37085.3| unnamed protein product
           [Vitis vinifera]
          Length = 123

 Score =  161 bits (408), Expect = 1e-37
 Identities = 82/103 (79%), Positives = 92/103 (89%), Gaps = 2/103 (1%)
 Frame = -1

Query: 579 MQEAREYRRNRNALFDGIEEGGIRATSY--SHEIDEQDNDRALDGLQDRVILLKRLSGDI 406
           M   R+YR NR ALFDGIEEGGIRA+S   SHEIDE DN+RA+DGLQDRV LLKRL+GDI
Sbjct: 1   MNSRRDYRGNRIALFDGIEEGGIRASSSYSSHEIDEHDNERAVDGLQDRVNLLKRLTGDI 60

Query: 405 NEEVETHNRLLDRTGNEMDASRGILSGTMDRFKMVFETKSSRR 277
           +EEVE+HNR+LDR GN+MDASRGILSGTMDRFKMVFET+SSRR
Sbjct: 61  HEEVESHNRMLDRVGNDMDASRGILSGTMDRFKMVFETRSSRR 103


>gb|AFW74080.1| BS14b [Zea mays]
          Length = 236

 Score =  161 bits (407), Expect = 1e-37
 Identities = 81/109 (74%), Positives = 91/109 (83%), Gaps = 1/109 (0%)
 Frame = -1

Query: 600 TRNTNESMQEAREYRRNRNALFDGIEEGGIRATSYS-HEIDEQDNDRALDGLQDRVILLK 424
           T     S    R +R NR +LFDGIEEGGIRATSYS HEIDEQ+ND A+DGLQDRV +LK
Sbjct: 108 TNRIETSAMNPRGHRSNRTSLFDGIEEGGIRATSYSSHEIDEQENDGAIDGLQDRVSILK 167

Query: 423 RLSGDINEEVETHNRLLDRTGNEMDASRGILSGTMDRFKMVFETKSSRR 277
           RLSGDI+EEVETHNR+LDR GN+MD SRG LSGT+D+FKMVFETKSSRR
Sbjct: 168 RLSGDIHEEVETHNRMLDRMGNDMDTSRGFLSGTVDKFKMVFETKSSRR 216


>ref|NP_001150579.1| LOC100284212 [Zea mays] gi|195640340|gb|ACG39638.1| BS14b [Zea
           mays]
          Length = 121

 Score =  161 bits (407), Expect = 1e-37
 Identities = 80/98 (81%), Positives = 89/98 (90%), Gaps = 1/98 (1%)
 Frame = -1

Query: 567 REYRRNRNALFDGIEEGGIRATSYS-HEIDEQDNDRALDGLQDRVILLKRLSGDINEEVE 391
           R YR NR +LFDGIEEGGIRATSYS HEIDEQ+ND A+DGLQDRV +LKRLSGDI+EEVE
Sbjct: 4   RGYRSNRTSLFDGIEEGGIRATSYSSHEIDEQENDGAIDGLQDRVSILKRLSGDIHEEVE 63

Query: 390 THNRLLDRTGNEMDASRGILSGTMDRFKMVFETKSSRR 277
           THNR+LDR GN+MD SRG LSGT+D+FKMVFETKSSRR
Sbjct: 64  THNRMLDRMGNDMDTSRGFLSGTVDKFKMVFETKSSRR 101


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