BLASTX nr result

ID: Coptis21_contig00010231 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010231
         (551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76433.1| hypothetical protein VITISV_033850 [Vitis vinifera]   132   4e-29
ref|XP_002308832.1| predicted protein [Populus trichocarpa] gi|2...   121   6e-26
gb|EEC81533.1| hypothetical protein OsI_24939 [Oryza sativa Indi...   108   6e-22
ref|NP_001058915.2| Os07g0154400 [Oryza sativa Japonica Group] g...   108   6e-22
ref|XP_002870268.1| hypothetical protein ARALYDRAFT_915332 [Arab...   107   2e-21

>emb|CAN76433.1| hypothetical protein VITISV_033850 [Vitis vinifera]
          Length = 1201

 Score =  132 bits (332), Expect = 4e-29
 Identities = 71/140 (50%), Positives = 91/140 (65%), Gaps = 36/140 (25%)
 Frame = +3

Query: 3   LSSYINGILDYIEGFNDENIHKVYGVFSHLALSARSNADSVGSSIANELLIIVRKQKT-- 176
           LSS+ING+LDY+EGF+ EN+HKVY VFS+LA+SARS+A+  GSSIANELL+IVRKQ T  
Sbjct: 389 LSSHINGVLDYLEGFSVENLHKVYEVFSNLAISARSSANFFGSSIANELLMIVRKQVTSP 448

Query: 177 ----------------------------------NCEESLELLRMSLDSCKSCPLPLIMF 254
                                             N  E+LELL+ SLDSCK  P+PLI+F
Sbjct: 449 DLKYKKMGLIGTLKIVSCLVDANISTCPGPSQQANSAEALELLKTSLDSCKQFPIPLILF 508

Query: 255 YDELIALLESKRLQPAIIDW 314
           YDEL+ +L+ + +QPAI+DW
Sbjct: 509 YDELVTMLDCRTVQPAIVDW 528


>ref|XP_002308832.1| predicted protein [Populus trichocarpa] gi|222854808|gb|EEE92355.1|
           predicted protein [Populus trichocarpa]
          Length = 1476

 Score =  121 bits (304), Expect = 6e-26
 Identities = 67/140 (47%), Positives = 86/140 (61%), Gaps = 36/140 (25%)
 Frame = +3

Query: 3   LSSYINGILDYIEGFNDENIHKVYGVFSHLALSARSNADSVGSSIANELLIIVRK----- 167
           LS++INGILDY+EGF  E++HKVY VFS LAL+ARS+    GSSIA+EL +I+RK     
Sbjct: 516 LSAHINGILDYLEGFCMEHLHKVYEVFSKLALAARSSTYCFGSSIADELFMIIRKQVSHP 575

Query: 168 -------------------------------QKTNCEESLELLRMSLDSCKSCPLPLIMF 254
                                          QK+NCEE+LELLR SLDSCK   LPL++F
Sbjct: 576 DMKYKKMGLIGTLKVVSCLGDINNATGASPSQKSNCEEALELLRTSLDSCKQLCLPLVLF 635

Query: 255 YDELIALLESKRLQPAIIDW 314
           YDEL  ++  K+LQP I++W
Sbjct: 636 YDELTTIMLHKKLQPEIVEW 655


>gb|EEC81533.1| hypothetical protein OsI_24939 [Oryza sativa Indica Group]
           gi|222636453|gb|EEE66585.1| hypothetical protein
           OsJ_23134 [Oryza sativa Japonica Group]
          Length = 1489

 Score =  108 bits (270), Expect = 6e-22
 Identities = 60/140 (42%), Positives = 82/140 (58%), Gaps = 36/140 (25%)
 Frame = +3

Query: 3   LSSYINGILDYIEGFNDENIHKVYGVFSHLALSARSNADSVGSSIANELLIIVRK----- 167
           LSS+I GILDY+E F+++N+ KVY +F HLAL+A  N  S GSS+ANELL++VRK     
Sbjct: 487 LSSHITGILDYLESFHEDNLRKVYEIFCHLALAAGFNTGSGGSSVANELLMVVRKQVSNP 546

Query: 168 -------------------------------QKTNCEESLELLRMSLDSCKSCPLPLIMF 254
                                          Q+ N +E+LELL+M+++SCK   LPLI+ 
Sbjct: 547 DMKYRRMGIIGALRIVSTIADVNASMNCSSSQQPNYDEALELLKMAVNSCKFVMLPLILL 606

Query: 255 YDELIALLESKRLQPAIIDW 314
           YDEL  LLE+  L  AI++W
Sbjct: 607 YDELAVLLENSSLHSAIVEW 626


>ref|NP_001058915.2| Os07g0154400 [Oryza sativa Japonica Group]
           gi|255677527|dbj|BAF20829.2| Os07g0154400 [Oryza sativa
           Japonica Group]
          Length = 1460

 Score =  108 bits (270), Expect = 6e-22
 Identities = 60/140 (42%), Positives = 82/140 (58%), Gaps = 36/140 (25%)
 Frame = +3

Query: 3   LSSYINGILDYIEGFNDENIHKVYGVFSHLALSARSNADSVGSSIANELLIIVRK----- 167
           LSS+I GILDY+E F+++N+ KVY +F HLAL+A  N  S GSS+ANELL++VRK     
Sbjct: 487 LSSHITGILDYLESFHEDNLRKVYEIFCHLALAAGFNTGSGGSSVANELLMVVRKQVSNP 546

Query: 168 -------------------------------QKTNCEESLELLRMSLDSCKSCPLPLIMF 254
                                          Q+ N +E+LELL+M+++SCK   LPLI+ 
Sbjct: 547 DMKYRRMGIIGALRIVSTIADVNASMNCSSSQQPNYDEALELLKMAVNSCKFVMLPLILL 606

Query: 255 YDELIALLESKRLQPAIIDW 314
           YDEL  LLE+  L  AI++W
Sbjct: 607 YDELAVLLENSSLHSAIVEW 626


>ref|XP_002870268.1| hypothetical protein ARALYDRAFT_915332 [Arabidopsis lyrata subsp.
           lyrata] gi|297316104|gb|EFH46527.1| hypothetical protein
           ARALYDRAFT_915332 [Arabidopsis lyrata subsp. lyrata]
          Length = 1385

 Score =  107 bits (266), Expect = 2e-21
 Identities = 65/144 (45%), Positives = 81/144 (56%), Gaps = 41/144 (28%)
 Frame = +3

Query: 6   SSYINGI-----LDYIEGFNDENIHKVYGVFSHLALSARSNADSVGSSIANELLIIVRK- 167
           SS+INGI     LDY+EGF  EN+HKVY VFS LALSAR++ DS  SSI+NEL++IVRK 
Sbjct: 449 SSHINGISGTCILDYLEGFTIENLHKVYEVFSLLALSARASGDSFRSSISNELMMIVRKQ 508

Query: 168 -----------------------------------QKTNCEESLELLRMSLDSCKSCPLP 242
                                              Q ++C E LELL+ S+DSC+   L 
Sbjct: 509 VSHPDLKYKKMGLVGSLTIVSSLGDANSVPDFSSSQVSDCGEILELLKTSVDSCRQSNLA 568

Query: 243 LIMFYDELIALLESKRLQPAIIDW 314
           LIMFYDE   +L  K LQP I++W
Sbjct: 569 LIMFYDEFATILSQKLLQPEIMEW 592


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