BLASTX nr result

ID: Coptis21_contig00010224 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010224
         (1038 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513923.1| Nodulin-26, putative [Ricinus communis] gi|2...    91   1e-27
ref|XP_003615114.1| Aquaporin NIP1-1 [Medicago truncatula] gi|12...    74   4e-21
ref|XP_003544208.1| PREDICTED: nodulin-26-like [Glycine max]           76   5e-21
ref|XP_002302297.1| aquaporin, MIP family, NIP subfamily [Populu...    94   4e-17
ref|XP_002453573.1| hypothetical protein SORBIDRAFT_04g008360 [S...    77   1e-16

>ref|XP_002513923.1| Nodulin-26, putative [Ricinus communis] gi|223547009|gb|EEF48506.1|
           Nodulin-26, putative [Ricinus communis]
          Length = 282

 Score = 90.5 bits (223), Expect(2) = 1e-27
 Identities = 49/124 (39%), Positives = 69/124 (55%)
 Frame = +3

Query: 249 LSGVAVGATVLFNVIVAG*ANLWTL*LLYFTIIS*STCSFRCTFPQKDPTFIRYSFAICR 428
           LSGVA+G T+LFN ++AG                                          
Sbjct: 194 LSGVAIGGTLLFNALLAG------------------------------------------ 211

Query: 429 PVTGASMNPARSIGPALVSLKFDNLWIYIVAPVLGASAATFVYGLVRVRAPDKSEDTIKS 608
           P+TGASMNPARS+GPA+VS  + NLW++IV+P+ GA AAT+VY ++RV  P+KSE+  K+
Sbjct: 212 PITGASMNPARSLGPAIVSGVYKNLWVFIVSPIFGALAATYVYNMLRVPEPEKSEEKTKN 271

Query: 609 V*NN 620
           + N+
Sbjct: 272 IFNH 275



 Score = 60.1 bits (144), Expect(2) = 1e-27
 Identities = 31/54 (57%), Positives = 38/54 (70%)
 Frame = +2

Query: 8   DLTKIVNAYSGSTTGLEALIWEFIITFMLMFTVCGVATDHRAV*FSSIVAITKT 169
           D+   V  Y  ST+ LEA+IWEFIITF+LMF +  VATD+RAV + S VAI  T
Sbjct: 149 DIEVTVTQYKDSTSDLEAIIWEFIITFILMFNILAVATDYRAVKYLSGVAIGGT 202


>ref|XP_003615114.1| Aquaporin NIP1-1 [Medicago truncatula] gi|124361191|gb|ABN09163.1|
           Major intrinsic protein [Medicago truncatula]
           gi|355516449|gb|AES98072.1| Aquaporin NIP1-1 [Medicago
           truncatula]
          Length = 262

 Score = 73.6 bits (179), Expect(2) = 4e-21
 Identities = 41/118 (34%), Positives = 58/118 (49%)
 Frame = +3

Query: 240 NNELSGVAVGATVLFNVIVAG*ANLWTL*LLYFTIIS*STCSFRCTFPQKDPTFIRYSFA 419
           + +L+GVA+G +VL N+I+AG                                       
Sbjct: 181 SKDLAGVAIGISVLINIIIAG--------------------------------------- 201

Query: 420 ICRPVTGASMNPARSIGPALVSLKFDNLWIYIVAPVLGASAATFVYGLVRVRAPDKSE 593
              P TGASMNPARS+GPA+VS  + N+W+YI+ P +GA  AT +Y  +RV  P + E
Sbjct: 202 ---PTTGASMNPARSLGPAIVSGNYKNIWVYIIGPTIGAVFATVLYTFLRVTKPAQPE 256



 Score = 55.1 bits (131), Expect(2) = 4e-21
 Identities = 24/43 (55%), Positives = 33/43 (76%)
 Frame = +2

Query: 2   KVDLTKIVNAYSGSTTGLEALIWEFIITFMLMFTVCGVATDHR 130
           KV++   +  +S  T+ LEAL+WE IITF+L+ T+CGVATDHR
Sbjct: 137 KVEIGVALTQFSNPTSYLEALVWESIITFILVLTICGVATDHR 179


>ref|XP_003544208.1| PREDICTED: nodulin-26-like [Glycine max]
          Length = 270

 Score = 75.9 bits (185), Expect(2) = 5e-21
 Identities = 42/118 (35%), Positives = 61/118 (51%)
 Frame = +3

Query: 240 NNELSGVAVGATVLFNVIVAG*ANLWTL*LLYFTIIS*STCSFRCTFPQKDPTFIRYSFA 419
           + +L+GVA+G +VL NVI+AG                                       
Sbjct: 181 SKDLTGVAIGISVLINVIIAG--------------------------------------- 201

Query: 420 ICRPVTGASMNPARSIGPALVSLKFDNLWIYIVAPVLGASAATFVYGLVRVRAPDKSE 593
              P+TGASMNPARS+GPA+VS  + N+W+YI++P+LGA +A+ +Y  + V  P K E
Sbjct: 202 ---PITGASMNPARSLGPAIVSGDYKNIWVYIISPILGAVSASTLYKFLEVNKPVKPE 256



 Score = 52.4 bits (124), Expect(2) = 5e-21
 Identities = 24/43 (55%), Positives = 30/43 (69%)
 Frame = +2

Query: 2   KVDLTKIVNAYSGSTTGLEALIWEFIITFMLMFTVCGVATDHR 130
           K D+   V  Y  ST+ LEA++WEFI T +LM T+ GVATDHR
Sbjct: 137 KADIGVTVTKYLSSTSDLEAIVWEFITTSILMLTIRGVATDHR 179


>ref|XP_002302297.1| aquaporin, MIP family, NIP subfamily [Populus trichocarpa]
           gi|222844023|gb|EEE81570.1| aquaporin, MIP family, NIP
           subfamily [Populus trichocarpa]
          Length = 282

 Score = 94.4 bits (233), Expect = 4e-17
 Identities = 54/130 (41%), Positives = 68/130 (52%)
 Frame = +3

Query: 231 PNQNNELSGVAVGATVLFNVIVAG*ANLWTL*LLYFTIIS*STCSFRCTFPQKDPTFIRY 410
           P  + +LSGVA+G  V+FN ++AG                                    
Sbjct: 188 PRASKDLSGVAIGGAVMFNAMIAG------------------------------------ 211

Query: 411 SFAICRPVTGASMNPARSIGPALVSLKFDNLWIYIVAPVLGASAATFVYGLVRVRAPDKS 590
                 P+TGASMNPARS+GPALVS  + NLW+YIV+P+LGA AA  VY ++RV  P K 
Sbjct: 212 ------PITGASMNPARSLGPALVSGVYKNLWVYIVSPILGAMAAAAVYSVLRVPEPAKP 265

Query: 591 EDTIKSV*NN 620
           EDT KS  NN
Sbjct: 266 EDTNKSTYNN 275



 Score = 63.5 bits (153), Expect = 8e-08
 Identities = 32/51 (62%), Positives = 39/51 (76%)
 Frame = +2

Query: 8   DLTKIVNAYSGSTTGLEALIWEFIITFMLMFTVCGVATDHRAV*FSSIVAI 160
           ++  IVN YS  T+ LEA++WEFIITF+LMFT+CGVATD RA    S VAI
Sbjct: 149 NIQPIVNQYSDPTSDLEAIVWEFIITFILMFTICGVATDPRASKDLSGVAI 199


>ref|XP_002453573.1| hypothetical protein SORBIDRAFT_04g008360 [Sorghum bicolor]
           gi|241933404|gb|EES06549.1| hypothetical protein
           SORBIDRAFT_04g008360 [Sorghum bicolor]
          Length = 287

 Score = 77.4 bits (189), Expect(2) = 1e-16
 Identities = 47/132 (35%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
 Frame = +3

Query: 246 ELSGVAVGATVLFNVIVAG*ANLWTL*LLYFTIIS*STCSFRCTFPQKDPTFIRYSFAIC 425
           EL+G+AVGAT+L NV++AG                                         
Sbjct: 193 ELAGLAVGATILLNVLIAG----------------------------------------- 211

Query: 426 RPVTGASMNPARSIGPALVSLKFDNLWIYIVAPVLGASAATFVYGLVR-----VRAPDKS 590
            PV+GASMNPARS+GPALVS ++ ++W+Y+V P++GA A  + Y L+R     +R   KS
Sbjct: 212 -PVSGASMNPARSVGPALVSGEYRSIWVYVVGPLVGAVAGAWAYNLIRFTNKPLREITKS 270

Query: 591 EDTIKSV*NNRV 626
              +KS+  NR+
Sbjct: 271 TSFLKSMSTNRM 282



 Score = 35.8 bits (81), Expect(2) = 1e-16
 Identities = 15/28 (53%), Positives = 22/28 (78%)
 Frame = +2

Query: 53  LEALIWEFIITFMLMFTVCGVATDHRAV 136
           +++L+ E I TF LMF + GVATD+RA+
Sbjct: 164 VQSLVIEIITTFYLMFVISGVATDNRAI 191


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