BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010221
         (1277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group] g...   278   2e-72
gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japo...   278   2e-72
emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]        274   4e-71
gb|ABA97403.1| retrotransposon protein, putative, unclassified [...   271   2e-70
gb|AAP53789.1| retrotransposon protein, putative, unclassified [...   269   1e-69

>ref|NP_001057680.2| Os06g0493000 [Oryza sativa Japonica Group]
            gi|255677065|dbj|BAF19594.2| Os06g0493000 [Oryza sativa
            Japonica Group]
          Length = 866

 Score =  278 bits (712), Expect = 2e-72
 Identities = 129/238 (54%), Positives = 171/238 (71%)
 Frame = +2

Query: 2    RAADALSRVMEDQATCNFISTVQPHWMQEVASSYEQDEVAQRLISQLLLAPQGTPHYTLT 181
            +AADALSR+ +  A    +  + P W+ EVA+SY  D     L S L +APQ  P YTL 
Sbjct: 370  KAADALSRMQQLNALTTTV--IVPQWITEVAASYSTDPKCHELESHLHIAPQSHPPYTLK 427

Query: 182  AGIIRYKQRIYIGKGNDLKKRLLAATHSSSVGGHSGIQASYQRAKTYFYWPGLKKSIVAF 361
             GI+RYK  I +G GN L+++LL + H S++GGHSG +A+YQR K  FYWPG+K ++  F
Sbjct: 428  GGILRYKDHIVVGAGNTLREQLLVSFHDSALGGHSGERATYQRMKQLFYWPGMKLAVTQF 487

Query: 362  VSSCDTCQRNKGEHVYPAGLLQPLSVPEQAWQHLTMDFIEGLPRSEGKDVIMVVVDRLTK 541
            V +C  CQ+NK EH  PAGLLQPL +PE AW H+TMDF+EGLP+SEGKDVI V+VDR TK
Sbjct: 488  VKACPVCQKNKTEHNMPAGLLQPLPLPEMAWSHITMDFVEGLPKSEGKDVIWVIVDRFTK 547

Query: 542  YSHFIGLSHPYTAATVARVFMDNVYKLHGLPASIISDRDKVFTSSFWRDLFKIMGTDI 715
            Y+HFI LSHP+TA  +   F+++ YKLHGLP  I+SDRD++FTSS W+++F+  G  +
Sbjct: 548  YAHFIPLSHPFTADQILTQFLEHFYKLHGLPTVIVSDRDRIFTSSTWKEVFEKAGVKL 605


>gb|EEE65753.1| hypothetical protein OsJ_21419 [Oryza sativa Japonica Group]
          Length = 645

 Score =  278 bits (712), Expect = 2e-72
 Identities = 129/238 (54%), Positives = 171/238 (71%)
 Frame = +2

Query: 2   RAADALSRVMEDQATCNFISTVQPHWMQEVASSYEQDEVAQRLISQLLLAPQGTPHYTLT 181
           +AADALSR+ +  A    +  + P W+ EVA+SY  D     L S L +APQ  P YTL 
Sbjct: 149 KAADALSRMQQLNALTTTV--IVPQWITEVAASYSTDPKCHELESHLHIAPQSHPPYTLK 206

Query: 182 AGIIRYKQRIYIGKGNDLKKRLLAATHSSSVGGHSGIQASYQRAKTYFYWPGLKKSIVAF 361
            GI+RYK  I +G GN L+++LL + H S++GGHSG +A+YQR K  FYWPG+K ++  F
Sbjct: 207 GGILRYKDHIVVGAGNTLREQLLVSFHDSALGGHSGERATYQRMKQLFYWPGMKLAVTQF 266

Query: 362 VSSCDTCQRNKGEHVYPAGLLQPLSVPEQAWQHLTMDFIEGLPRSEGKDVIMVVVDRLTK 541
           V +C  CQ+NK EH  PAGLLQPL +PE AW H+TMDF+EGLP+SEGKDVI V+VDR TK
Sbjct: 267 VKACPVCQKNKTEHNMPAGLLQPLPLPEMAWSHITMDFVEGLPKSEGKDVIWVIVDRFTK 326

Query: 542 YSHFIGLSHPYTAATVARVFMDNVYKLHGLPASIISDRDKVFTSSFWRDLFKIMGTDI 715
           Y+HFI LSHP+TA  +   F+++ YKLHGLP  I+SDRD++FTSS W+++F+  G  +
Sbjct: 327 YAHFIPLSHPFTADQILTQFLEHFYKLHGLPTVIVSDRDRIFTSSTWKEVFEKAGVKL 384


>emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]
          Length = 1311

 Score =  274 bits (700), Expect = 4e-71
 Identities = 127/240 (52%), Positives = 169/240 (70%), Gaps = 2/240 (0%)
 Frame = +2

Query: 2    RAADALSRVMEDQATCNFIST--VQPHWMQEVASSYEQDEVAQRLISQLLLAPQGTPHYT 175
            +AADALSR+    +     ST  + P W+ E+ +SY  D     L SQL + PQG P YT
Sbjct: 814  KAADALSRI---PSVAQLFSTTIIVPTWITEILASYATDPKCTALESQLRITPQGHPPYT 870

Query: 176  LTAGIIRYKQRIYIGKGNDLKKRLLAATHSSSVGGHSGIQASYQRAKTYFYWPGLKKSIV 355
            LT+GI+RYK R+Y+G G DL+ +L  + H S++GGHSG +A+YQRAK  FYWPG+KK I 
Sbjct: 871  LTSGILRYKNRLYVGAGTDLRAKLQQSFHDSALGGHSGERATYQRAKLLFYWPGMKKDIA 930

Query: 356  AFVSSCDTCQRNKGEHVYPAGLLQPLSVPEQAWQHLTMDFIEGLPRSEGKDVIMVVVDRL 535
            ++V  C  CQ+NK EH    GLL PL +PE AW H++MDFIEGLP+S+ KDVI V+VDR 
Sbjct: 931  SYVKLCPVCQKNKSEHNLQPGLLHPLPIPEMAWTHISMDFIEGLPKSDNKDVIWVIVDRF 990

Query: 536  TKYSHFIGLSHPYTAATVARVFMDNVYKLHGLPASIISDRDKVFTSSFWRDLFKIMGTDI 715
            TKY+HF+ LSHP+TA  +   F++N YK HGLPA I+SDRD++FTS  W+D+F+  G  +
Sbjct: 991  TKYAHFVALSHPFTADQIVTQFVENYYKHHGLPAVIVSDRDRIFTSQTWKDVFEKAGVKL 1050


>gb|ABA97403.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 562

 Score =  271 bits (694), Expect = 2e-70
 Identities = 131/250 (52%), Positives = 171/250 (68%), Gaps = 2/250 (0%)
 Frame = +2

Query: 2   RAADALSRVMEDQATCNFIST--VQPHWMQEVASSYEQDEVAQRLISQLLLAPQGTPHYT 175
           +AADALSR+        + ST  + P W+ E+ +SY  D     L SQL + PQG P YT
Sbjct: 227 KAADALSRI---PFVAQWFSTTIIVPTWIIEILASYATDPKCTALESQLRITPQGHPSYT 283

Query: 176 LTAGIIRYKQRIYIGKGNDLKKRLLAATHSSSVGGHSGIQASYQRAKTYFYWPGLKKSIV 355
           LT GI+RYK R+Y+G G DL+ +L  + H S++GGHSG +A+YQRAK  FYWPG+KK I 
Sbjct: 284 LTGGILRYKNRLYVGAGTDLRAKLQQSFHDSALGGHSGERATYQRAKLLFYWPGMKKDIA 343

Query: 356 AFVSSCDTCQRNKGEHVYPAGLLQPLSVPEQAWQHLTMDFIEGLPRSEGKDVIMVVVDRL 535
           ++V  C  CQ+NK EH    GLL PL VPE AW H++MDFIEGLP+S+ KDVI V+VDR 
Sbjct: 344 SYVKLCPVCQKNKSEHNLQPGLLHPLPVPEMAWTHISMDFIEGLPKSDNKDVIWVIVDRF 403

Query: 536 TKYSHFIGLSHPYTAATVARVFMDNVYKLHGLPASIISDRDKVFTSSFWRDLFKIMGTDI 715
           TKY+HF+ LSHP+TA  +   F++N YK HGLPA I+SDRD +FTS  W+D+F+  G  +
Sbjct: 404 TKYAHFVALSHPFTADQIVTQFVENYYKHHGLPAVIVSDRDIIFTSQTWKDVFEKAGVKL 463

Query: 716 FRLRFFSNNY 745
                FS+ Y
Sbjct: 464 ----HFSSGY 469


>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1611

 Score =  269 bits (688), Expect = 1e-69
 Identities = 130/246 (52%), Positives = 179/246 (72%), Gaps = 5/246 (2%)
 Frame = +2

Query: 8    ADALSR---VMEDQATCNFISTVQPHWMQEVASSYEQDEVAQRLISQLLLAPQGTP--HY 172
            ADALSR   + E+Q  C  I+ V P W+Q++  SYE+D  A +++S  L+   G P  HY
Sbjct: 1114 ADALSRSPNLKEEQ--CLPITVVVPEWVQDIKRSYEEDIFAHKILS--LIETDGDPERHY 1169

Query: 173  TLTAGIIRYKQRIYIGKGNDLKKRLLAATHSSSVGGHSGIQASYQRAKTYFYWPGLKKSI 352
             L +G+++YK RIY+G+  +++  LL A H+S  GGHSGI+A+Y R K  FYWPGLKK +
Sbjct: 1170 KLESGLLKYKGRIYVGETTEIRMLLLEAYHASYFGGHSGIRATYHRIKQLFYWPGLKKQV 1229

Query: 353  VAFVSSCDTCQRNKGEHVYPAGLLQPLSVPEQAWQHLTMDFIEGLPRSEGKDVIMVVVDR 532
              ++  C TCQ  K EH++  GLL PL VP+ AW H+TMDFIEGLP+S+GKDVI+VVVDR
Sbjct: 1230 EHYIRECPTCQITKAEHIHIPGLLNPLEVPDMAWTHITMDFIEGLPKSQGKDVILVVVDR 1289

Query: 533  LTKYSHFIGLSHPYTAATVARVFMDNVYKLHGLPASIISDRDKVFTSSFWRDLFKIMGTD 712
            LTKY+HF+ LSHPYT   V ++FMDN++KLHG+P  I++DRD+VFTS+F++++FK   T 
Sbjct: 1290 LTKYAHFLALSHPYTVEQVVQIFMDNIHKLHGMPMVIVTDRDRVFTSNFFQEIFK---TQ 1346

Query: 713  IFRLRF 730
              +LRF
Sbjct: 1347 KVKLRF 1352