BLASTX nr result

ID: Coptis21_contig00010207 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010207
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277079.1| PREDICTED: leucyl-tRNA synthetase, cytoplasm...   125   3e-27
emb|CAN75094.1| hypothetical protein VITISV_024181 [Vitis vinifera]   125   3e-27
ref|XP_002264666.1| PREDICTED: leucyl-tRNA synthetase, cytoplasm...   125   4e-27
emb|CAN66687.1| hypothetical protein VITISV_037862 [Vitis vinifera]   123   1e-26
ref|XP_003517414.1| PREDICTED: leucyl-tRNA synthetase, cytoplasm...   122   3e-26

>ref|XP_002277079.1| PREDICTED: leucyl-tRNA synthetase, cytoplasmic-like [Vitis vinifera]
          Length = 1088

 Score =  125 bits (315), Expect = 3e-27
 Identities = 60/99 (60%), Positives = 75/99 (75%)
 Frame = +2

Query: 68   SSEENKPRTGLIYVNERYKGWKERCLTIFLSKFNTETRTFAPEEDIWEALETSFEGEVVS 247
            SS EN+P  GLIY+ E+Y GWK  CL I  SKFNTET +FAP+++I EAL+ S  G+  +
Sbjct: 936  SSAENRPTVGLIYMAEQYDGWKAECLKILQSKFNTETSSFAPDQEILEALQQSEIGQEGN 995

Query: 248  FKQIQKHCRPFLRFKRDEALCLGPQALDLNLPFSEIEVL 364
            FK+ QK C PFLRFK+DEA+ +G QALDL LPF E+EVL
Sbjct: 996  FKETQKLCMPFLRFKKDEAIAVGHQALDLKLPFGEVEVL 1034


>emb|CAN75094.1| hypothetical protein VITISV_024181 [Vitis vinifera]
          Length = 1055

 Score =  125 bits (315), Expect = 3e-27
 Identities = 60/99 (60%), Positives = 75/99 (75%)
 Frame = +2

Query: 68   SSEENKPRTGLIYVNERYKGWKERCLTIFLSKFNTETRTFAPEEDIWEALETSFEGEVVS 247
            SS EN+P  GLIY+ E+Y GWK  CL I  SKFNTET +FAP+++I EAL+ S  G+  +
Sbjct: 903  SSAENRPTVGLIYMAEQYDGWKAECLKILQSKFNTETSSFAPDQEILEALQQSEIGQEGN 962

Query: 248  FKQIQKHCRPFLRFKRDEALCLGPQALDLNLPFSEIEVL 364
            FK+ QK C PFLRFK+DEA+ +G QALDL LPF E+EVL
Sbjct: 963  FKETQKLCMPFLRFKKDEAIAVGHQALDLKLPFGEVEVL 1001


>ref|XP_002264666.1| PREDICTED: leucyl-tRNA synthetase, cytoplasmic-like [Vitis vinifera]
          Length = 1085

 Score =  125 bits (314), Expect = 4e-27
 Identities = 63/104 (60%), Positives = 76/104 (73%)
 Frame = +2

Query: 56   PETHSSEENKPRTGLIYVNERYKGWKERCLTIFLSKFNTETRTFAPEEDIWEALETSFEG 235
            P T  +E N    GLIYVNE+Y GWKE CL I  SKF++  RTFA +++I EAL+ S  G
Sbjct: 931  PVTSLTESNLK--GLIYVNEQYDGWKEECLRILQSKFDSRNRTFAADKEILEALQRSSVG 988

Query: 236  EVVSFKQIQKHCRPFLRFKRDEALCLGPQALDLNLPFSEIEVLR 367
            +  + KQ+QK C PFLRFK+DEA+ LGPQALDL LPF EIEVLR
Sbjct: 989  QATNSKQVQKLCMPFLRFKKDEAVALGPQALDLRLPFGEIEVLR 1032


>emb|CAN66687.1| hypothetical protein VITISV_037862 [Vitis vinifera]
          Length = 1085

 Score =  123 bits (309), Expect = 1e-26
 Identities = 62/103 (60%), Positives = 75/103 (72%)
 Frame = +2

Query: 56   PETHSSEENKPRTGLIYVNERYKGWKERCLTIFLSKFNTETRTFAPEEDIWEALETSFEG 235
            P T  +E N    GLIYVNE+Y GWKE CL I  SKF++  RTFA +++I EAL+ S  G
Sbjct: 931  PVTSLTESNLK--GLIYVNEQYDGWKEECLRILQSKFDSRNRTFAADKEILEALQRSSVG 988

Query: 236  EVVSFKQIQKHCRPFLRFKRDEALCLGPQALDLNLPFSEIEVL 364
            +  + KQ+QK C PFLRFK+DEA+ LGPQALDL LPF EIEVL
Sbjct: 989  QATNSKQVQKLCMPFLRFKKDEAVALGPQALDLRLPFGEIEVL 1031


>ref|XP_003517414.1| PREDICTED: leucyl-tRNA synthetase, cytoplasmic-like [Glycine max]
          Length = 1090

 Score =  122 bits (306), Expect = 3e-26
 Identities = 61/104 (58%), Positives = 78/104 (75%)
 Frame = +2

Query: 56   PETHSSEENKPRTGLIYVNERYKGWKERCLTIFLSKFNTETRTFAPEEDIWEALETSFEG 235
            P   S  ENK  TGLIYVNE++ G +  CL+I  +KFN +TRTFAP+ +I +AL+ S  G
Sbjct: 935  PPAASVTENKV-TGLIYVNEQFDGLEADCLSILQNKFNRDTRTFAPDSEILQALQQSSVG 993

Query: 236  EVVSFKQIQKHCRPFLRFKRDEALCLGPQALDLNLPFSEIEVLR 367
            +  ++KQIQK C PFLRFK++EA+ LGPQALDL LPF EIEVL+
Sbjct: 994  QSSNYKQIQKRCMPFLRFKKEEAIALGPQALDLRLPFGEIEVLK 1037


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