BLASTX nr result

ID: Coptis21_contig00010191 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010191
         (1030 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532238.1| transcription factor, putative [Ricinus comm...   162   2e-37
ref|XP_002268816.1| PREDICTED: auxin-responsive protein IAA33 [V...   157   5e-36
ref|XP_002864517.1| indoleacetic acid-induced protein 33 [Arabid...   154   3e-35
gb|ADL70834.1| indole-3-acetic acid inducible 33 [Arabidopsis th...   153   6e-35
gb|ADL70833.1| indole-3-acetic acid inducible 33 [Arabidopsis th...   153   6e-35

>ref|XP_002532238.1| transcription factor, putative [Ricinus communis]
           gi|223528072|gb|EEF30147.1| transcription factor,
           putative [Ricinus communis]
          Length = 173

 Score =  162 bits (409), Expect = 2e-37
 Identities = 91/147 (61%), Positives = 103/147 (70%), Gaps = 5/147 (3%)
 Frame = +1

Query: 364 FPSI---EDDFVSTMVPQVTVVLEGRSICQRISLDKHASYQSLAKALRQMFVDESDLEVL 534
           FP++   +DD VST+VP VTVVLEGRSICQRISL KHASYQSLA ALRQMFVD  D   +
Sbjct: 53  FPALYDDDDDLVSTVVPPVTVVLEGRSICQRISLHKHASYQSLAMALRQMFVDGGDAGGV 112

Query: 535 --SDKELDLSNAIPGHVIAYEDMEDDLLLVGDLNWKDFVRVAKXXXXXXXXXXXXXXXXX 708
             SD +LDL+NA+PGH+IAYEDME+DLLL GDLNWKDF                      
Sbjct: 113 TDSDTDLDLTNAVPGHLIAYEDMENDLLLAGDLNWKDF---------------------- 150

Query: 709 XXDFVRVAKRIRVIPVKANSRKGRRGA 789
               VRVAKRIR++PVK NSRKGR GA
Sbjct: 151 ----VRVAKRIRILPVKGNSRKGRGGA 173


>ref|XP_002268816.1| PREDICTED: auxin-responsive protein IAA33 [Vitis vinifera]
           gi|297735399|emb|CBI17839.3| unnamed protein product
           [Vitis vinifera]
          Length = 168

 Score =  157 bits (396), Expect = 5e-36
 Identities = 98/202 (48%), Positives = 117/202 (57%), Gaps = 4/202 (1%)
 Frame = +1

Query: 193 QNSTMKRRWQDKQLNINDDQRFNSAEFYAKLIGXXXXXXXXXXXXXYNSGHRRNLPCFPS 372
           Q+S   RRW       + + R +SA FYA+                       ++  FP 
Sbjct: 11  QDSFDSRRW-------SQNHRPSSAGFYARRAAAPPQPSSS------------SIQTFPG 51

Query: 373 I-EDDFVSTMVPQVTVVLEGRSICQRISLDKHASYQSLAKALRQMFVDESDLEVLS---D 540
           + +DD V+ +VP VTVVLEGRSIC RISL  HASYQSLA+ALRQMFVD S  +V +   D
Sbjct: 52  LADDDLVAAVVPPVTVVLEGRSICHRISLHSHASYQSLARALRQMFVDGSSADVGAAGGD 111

Query: 541 KELDLSNAIPGHVIAYEDMEDDLLLVGDLNWKDFVRVAKXXXXXXXXXXXXXXXXXXXDF 720
            ELDLSNA+PGH+IAYEDME+DLLL GDLNWKDF                          
Sbjct: 112 HELDLSNAVPGHLIAYEDMENDLLLAGDLNWKDF-------------------------- 145

Query: 721 VRVAKRIRVIPVKANSRKGRRG 786
           VRVAKRIR++P K NSRKGR G
Sbjct: 146 VRVAKRIRILPAKRNSRKGRGG 167


>ref|XP_002864517.1| indoleacetic acid-induced protein 33 [Arabidopsis lyrata subsp.
           lyrata] gi|297310352|gb|EFH40776.1| indoleacetic
           acid-induced protein 33 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 171

 Score =  154 bits (389), Expect = 3e-35
 Identities = 85/138 (61%), Positives = 97/138 (70%)
 Frame = +1

Query: 370 SIEDDFVSTMVPQVTVVLEGRSICQRISLDKHASYQSLAKALRQMFVDESDLEVLSDKEL 549
           ++EDD VS++VP VTVVLEGRSICQRISLDKH SYQSLA ALRQMFVD +D    S  +L
Sbjct: 62  NVEDDLVSSVVPPVTVVLEGRSICQRISLDKHGSYQSLALALRQMFVDGAD----STDDL 117

Query: 550 DLSNAIPGHVIAYEDMEDDLLLVGDLNWKDFVRVAKXXXXXXXXXXXXXXXXXXXDFVRV 729
           DLSNAIPGH+IAYEDME+DLLL GDL WKDF                          VRV
Sbjct: 118 DLSNAIPGHLIAYEDMENDLLLAGDLTWKDF--------------------------VRV 151

Query: 730 AKRIRVIPVKANSRKGRR 783
           AKRIR++PVK N+RK +R
Sbjct: 152 AKRIRILPVKGNTRKVKR 169


>gb|ADL70834.1| indole-3-acetic acid inducible 33 [Arabidopsis thaliana]
           gi|304322745|gb|ADL70843.1| indole-3-acetic acid
           inducible 33 [Arabidopsis thaliana]
          Length = 170

 Score =  153 bits (387), Expect = 6e-35
 Identities = 84/138 (60%), Positives = 97/138 (70%)
 Frame = +1

Query: 370 SIEDDFVSTMVPQVTVVLEGRSICQRISLDKHASYQSLAKALRQMFVDESDLEVLSDKEL 549
           ++EDD VS++VP VTVVLEGRSICQRISLDKH SYQSLA ALRQMFVD +D    S  +L
Sbjct: 61  NVEDDLVSSVVPPVTVVLEGRSICQRISLDKHGSYQSLASALRQMFVDGAD----STDDL 116

Query: 550 DLSNAIPGHVIAYEDMEDDLLLVGDLNWKDFVRVAKXXXXXXXXXXXXXXXXXXXDFVRV 729
           DLSNAIPGH+IAYEDME+DLLL GDL WKDF                          VRV
Sbjct: 117 DLSNAIPGHLIAYEDMENDLLLAGDLTWKDF--------------------------VRV 150

Query: 730 AKRIRVIPVKANSRKGRR 783
           AKRIR++PVK N+R+ +R
Sbjct: 151 AKRIRILPVKGNTRQVKR 168


>gb|ADL70833.1| indole-3-acetic acid inducible 33 [Arabidopsis thaliana]
           gi|304322731|gb|ADL70836.1| indole-3-acetic acid
           inducible 33 [Arabidopsis thaliana]
           gi|304322737|gb|ADL70839.1| indole-3-acetic acid
           inducible 33 [Arabidopsis thaliana]
          Length = 170

 Score =  153 bits (387), Expect = 6e-35
 Identities = 84/138 (60%), Positives = 97/138 (70%)
 Frame = +1

Query: 370 SIEDDFVSTMVPQVTVVLEGRSICQRISLDKHASYQSLAKALRQMFVDESDLEVLSDKEL 549
           ++EDD VS++VP VTVVLEGRSICQRISLDKH SYQSLA ALRQMFVD +D    S  +L
Sbjct: 61  NVEDDLVSSVVPPVTVVLEGRSICQRISLDKHGSYQSLASALRQMFVDGAD----STDDL 116

Query: 550 DLSNAIPGHVIAYEDMEDDLLLVGDLNWKDFVRVAKXXXXXXXXXXXXXXXXXXXDFVRV 729
           DLSNAIPGH+IAYEDME+DLLL GDL WKDF                          VRV
Sbjct: 117 DLSNAIPGHLIAYEDMENDLLLAGDLTWKDF--------------------------VRV 150

Query: 730 AKRIRVIPVKANSRKGRR 783
           AKRIR++PVK N+R+ +R
Sbjct: 151 AKRIRILPVKGNTRQVKR 168


Top