BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010188
         (1170 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511399.1| 1-deoxy-D-xylulose 5-phosphate reductoisomer...   223   7e-56
gb|AEZ55867.1| chloroplast 1-deoxy-D-xylulose 5-phosphate reduct...   223   9e-56
ref|XP_002282761.1| PREDICTED: 1-deoxy-D-xylulose 5-phosphate re...   221   2e-55
gb|AAY87151.2| 1-deoxy-D-xylulose 5-phosphate reductoisomerase [...   221   4e-55
ref|NP_001041780.1| Os01g0106900 [Oryza sativa Japonica Group] g...   220   5e-55

>ref|XP_002511399.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplast
            precursor, putative [Ricinus communis]
            gi|223550514|gb|EEF52001.1| 1-deoxy-D-xylulose
            5-phosphate reductoisomerase, chloroplast precursor,
            putative [Ricinus communis]
          Length = 467

 Score =  223 bits (568), Expect = 7e-56
 Identities = 114/146 (78%), Positives = 125/146 (85%)
 Frame = -1

Query: 1164 RRARCSVQSPPPAWPGQAVAEQGHKVLDGPKPISIVGSTGSIGTQTLDIVAENPDKFRVV 985
            R+ +CS Q+PPPAWPG+AVAE G K  DGPKPISIVGSTGSIGTQTLDIVAENPDKFRVV
Sbjct: 41   RKVQCSAQAPPPAWPGRAVAEPGRKTWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRVV 100

Query: 984  ALAAGLNVTLLAEQVKTFRPQLVAVRNESLLIELKEALADADYKPEIIPFFLLGPEIIPG 805
            ALAAG NVTLLA+QVKTF+PQLV+VR+ESL+ ELKEALAD D K          PEIIPG
Sbjct: 101  ALAAGSNVTLLADQVKTFKPQLVSVRDESLVDELKEALADVDEK----------PEIIPG 150

Query: 804  EQGVAEVARHPDAVTVVTGIVGCAGL 727
            EQG+ EVARHPDAV+VVTGIVGCAGL
Sbjct: 151  EQGIVEVARHPDAVSVVTGIVGCAGL 176


>gb|AEZ55867.1| chloroplast 1-deoxy-D-xylulose 5-phosphate reductoisomerase
            [Mitragyna speciosa]
          Length = 438

 Score =  223 bits (567), Expect = 9e-56
 Identities = 121/180 (67%), Positives = 135/180 (75%), Gaps = 5/180 (2%)
 Frame = -1

Query: 1164 RRARCSVQSPPPAWPGQAVAEQGHKVLDGPKPISIVGSTGSIGTQTLDIVAENPDKFRVV 985
            ++ +CS Q PPPAWPG+AVAE G K  DGPKPISIVGSTGSIGTQTLDIVAENPDKFRVV
Sbjct: 46   KKVQCSAQPPPPAWPGRAVAEPGRKSWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRVV 105

Query: 984  ALAAGLNVTLLAEQVKTFRPQLVAVRNESLLIELKEALADADYKPEIIPFFLLGPEIIPG 805
            ALAAG NVTLLA+QVKTF+PQLVAVRNESL+ EL+EALAD +YK          PEIIPG
Sbjct: 106  ALAAGSNVTLLADQVKTFKPQLVAVRNESLVDELEEALADFEYK----------PEIIPG 155

Query: 804  EQGVAEVARHPDAVTVVTGIVGCAGL-----TV*RCRSYEKAKKRLTIVEAPNVLTITLK 640
            E+GV EVARHPDAV+VVTGIVGCAGL      +   +    A K   I   P VL +  K
Sbjct: 156  EEGVVEVARHPDAVSVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHK 215


>ref|XP_002282761.1| PREDICTED: 1-deoxy-D-xylulose 5-phosphate reductoisomerase,
            chloroplastic [Vitis vinifera]
            gi|297733784|emb|CBI15031.3| unnamed protein product
            [Vitis vinifera]
          Length = 471

 Score =  221 bits (564), Expect = 2e-55
 Identities = 119/180 (66%), Positives = 133/180 (73%), Gaps = 5/180 (2%)
 Frame = -1

Query: 1164 RRARCSVQSPPPAWPGQAVAEQGHKVLDGPKPISIVGSTGSIGTQTLDIVAENPDKFRVV 985
            RR  CS Q PPPAWPG+AV E G K  DGPKP+S+VGSTGSIGTQTLDIVAENPDKFR+V
Sbjct: 45   RRVNCSAQPPPPAWPGRAVPELGRKTWDGPKPLSVVGSTGSIGTQTLDIVAENPDKFRIV 104

Query: 984  ALAAGLNVTLLAEQVKTFRPQLVAVRNESLLIELKEALADADYKPEIIPFFLLGPEIIPG 805
            ALAAG NVTLLA+QVKTF+PQLVAVRNE+L+ ELKEALAD ++K          PEIIPG
Sbjct: 105  ALAAGSNVTLLADQVKTFKPQLVAVRNEALVNELKEALADCEHK----------PEIIPG 154

Query: 804  EQGVAEVARHPDAVTVVTGIVGCAGL-----TV*RCRSYEKAKKRLTIVEAPNVLTITLK 640
            EQGV EVARHP+AVTVVTGIVGCAGL      +   +    A K   I   P VL +  K
Sbjct: 155  EQGVIEVARHPEAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAHK 214


>gb|AAY87151.2| 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Rauvolfia
            verticillata]
          Length = 474

 Score =  221 bits (562), Expect = 4e-55
 Identities = 121/180 (67%), Positives = 136/180 (75%), Gaps = 5/180 (2%)
 Frame = -1

Query: 1164 RRARCSVQSPPPAWPGQAVAEQGHKVLDGPKPISIVGSTGSIGTQTLDIVAENPDKFRVV 985
            ++ +CSVQ PPPAWPG+AVAE G+K  +G KPISIVGSTGSIGTQTLDIVAENPDKFRVV
Sbjct: 48   KKIQCSVQPPPPAWPGRAVAEPGYKTWEGQKPISIVGSTGSIGTQTLDIVAENPDKFRVV 107

Query: 984  ALAAGLNVTLLAEQVKTFRPQLVAVRNESLLIELKEALADADYKPEIIPFFLLGPEIIPG 805
            ALAAG NVTLLA+QVKTF+PQLVAVRNESL+ ELKEAL+D + K          PEIIPG
Sbjct: 108  ALAAGSNVTLLADQVKTFKPQLVAVRNESLVDELKEALSDVEDK----------PEIIPG 157

Query: 804  EQGVAEVARHPDAVTVVTGIVGCAGL-----TV*RCRSYEKAKKRLTIVEAPNVLTITLK 640
            EQGV EVARHPDAVTVVTGIVGCAGL      +   ++   A K   I   P VL +  K
Sbjct: 158  EQGVVEVARHPDAVTVVTGIVGCAGLKPTVAAIEAGKNIVLANKETLIAGGPFVLPLAHK 217


>ref|NP_001041780.1| Os01g0106900 [Oryza sativa Japonica Group]
            gi|110808217|sp|Q8W250.2|DXR_ORYSJ RecName:
            Full=1-deoxy-D-xylulose 5-phosphate reductoisomerase,
            chloroplastic; Short=1-deoxyxylulose-5-phosphate
            reductoisomerase; Short=DXP reductoisomerase; AltName:
            Full=2-C-methyl-D-erythritol 4-phosphate synthase; Flags:
            Precursor gi|10945254|dbj|BAB16915.1| putative
            1-deoxy-D-xylulose 5-phosphate reductoisomerase [Oryza
            sativa Japonica Group] gi|17385653|dbj|BAB78606.1|
            putative 1-deoxy-D-xylulose 5-phosphate reductoisomerase
            [Oryza sativa Japonica Group]
            gi|113531311|dbj|BAF03694.1| Os01g0106900 [Oryza sativa
            Japonica Group] gi|215704634|dbj|BAG94262.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|222617587|gb|EEE53719.1| hypothetical protein
            OsJ_00058 [Oryza sativa Japonica Group]
          Length = 473

 Score =  220 bits (561), Expect = 5e-55
 Identities = 123/181 (67%), Positives = 135/181 (74%), Gaps = 6/181 (3%)
 Frame = -1

Query: 1164 RRARCSVQ-SPPPAWPGQAVAEQGHKVLDGPKPISIVGSTGSIGTQTLDIVAENPDKFRV 988
            RR  CS+Q +PPPAWPG+AV E G +  DGPKPISIVGSTGSIGTQTLDIVAENPDKFRV
Sbjct: 46   RRTCCSMQQAPPPAWPGRAVVEPGRRSWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRV 105

Query: 987  VALAAGLNVTLLAEQVKTFRPQLVAVRNESLLIELKEALADADYKPEIIPFFLLGPEIIP 808
            VALAAG NVTLLA+QVKTF+P+LVAVRNESL+ ELKEALAD D+K          PEIIP
Sbjct: 106  VALAAGSNVTLLADQVKTFKPKLVAVRNESLVDELKEALADCDWK----------PEIIP 155

Query: 807  GEQGVAEVARHPDAVTVVTGIVGCAGL-----TV*RCRSYEKAKKRLTIVEAPNVLTITL 643
            GEQGV EVARHPDAVTVVTGIVGCAGL      +   +    A K   I   P VL +  
Sbjct: 156  GEQGVIEVARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLAQ 215

Query: 642  K 640
            K
Sbjct: 216  K 216