BLASTX nr result

ID: Coptis21_contig00010183 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010183
         (577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322209.1| predicted protein [Populus trichocarpa] gi|2...   129   5e-28
ref|XP_002276527.1| PREDICTED: uncharacterized protein LOC100243...   124   9e-27
ref|XP_002511292.1| conserved hypothetical protein [Ricinus comm...   124   1e-26
ref|XP_003526989.1| PREDICTED: uncharacterized protein LOC100791...   123   2e-26
gb|AFK41486.1| unknown [Lotus japonicus]                              119   5e-25

>ref|XP_002322209.1| predicted protein [Populus trichocarpa] gi|222869205|gb|EEF06336.1|
           predicted protein [Populus trichocarpa]
          Length = 296

 Score =  129 bits (323), Expect = 5e-28
 Identities = 60/69 (86%), Positives = 64/69 (92%)
 Frame = -1

Query: 541 GPQPFKFAGIGGVSEFLGWTDQQRAAAAKEGWAYRLVFSIRLVGLFLVADGLFIGAQQVA 362
           GPQP KFAGIGGVSEFLGWTDQQRAAAAKEGW YRL+FS RLVG+FLVAD LFIGAQQV 
Sbjct: 228 GPQPLKFAGIGGVSEFLGWTDQQRAAAAKEGWGYRLLFSARLVGIFLVADALFIGAQQVG 287

Query: 361 RYLQDVRSH 335
           RY+QD+RSH
Sbjct: 288 RYIQDLRSH 296


>ref|XP_002276527.1| PREDICTED: uncharacterized protein LOC100243259 [Vitis vinifera]
           gi|297733669|emb|CBI14916.3| unnamed protein product
           [Vitis vinifera]
          Length = 286

 Score =  124 bits (312), Expect = 9e-27
 Identities = 57/69 (82%), Positives = 62/69 (89%)
 Frame = -1

Query: 541 GPQPFKFAGIGGVSEFLGWTDQQRAAAAKEGWAYRLVFSIRLVGLFLVADGLFIGAQQVA 362
           GP+PFK AGIGG+SEFLGWTDQQR AA KEGW YRLVFS RLVG+FLVAD LFIGAQQ+ 
Sbjct: 218 GPEPFKLAGIGGLSEFLGWTDQQRVAATKEGWGYRLVFSARLVGVFLVADALFIGAQQLG 277

Query: 361 RYLQDVRSH 335
           RYLQD+RSH
Sbjct: 278 RYLQDIRSH 286


>ref|XP_002511292.1| conserved hypothetical protein [Ricinus communis]
           gi|223550407|gb|EEF51894.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 294

 Score =  124 bits (311), Expect = 1e-26
 Identities = 57/69 (82%), Positives = 62/69 (89%)
 Frame = -1

Query: 541 GPQPFKFAGIGGVSEFLGWTDQQRAAAAKEGWAYRLVFSIRLVGLFLVADGLFIGAQQVA 362
           GPQP KFAGIGGVSEFLGWTDQQR AAAKEGW YRL+FS RLVG+ LVAD LF+GAQQV+
Sbjct: 226 GPQPLKFAGIGGVSEFLGWTDQQRVAAAKEGWGYRLLFSARLVGVILVADALFLGAQQVS 285

Query: 361 RYLQDVRSH 335
           RY QD+RSH
Sbjct: 286 RYFQDIRSH 294


>ref|XP_003526989.1| PREDICTED: uncharacterized protein LOC100791331 [Glycine max]
          Length = 290

 Score =  123 bits (309), Expect = 2e-26
 Identities = 56/69 (81%), Positives = 61/69 (88%)
 Frame = -1

Query: 541 GPQPFKFAGIGGVSEFLGWTDQQRAAAAKEGWAYRLVFSIRLVGLFLVADGLFIGAQQVA 362
           GP P KFAGIGGVSEFLGWTDQQRAAAAKEGW YRLVFS RL+GL LV D L+IGAQQ+ 
Sbjct: 222 GPMPLKFAGIGGVSEFLGWTDQQRAAAAKEGWGYRLVFSARLIGLILVVDALYIGAQQIG 281

Query: 361 RYLQDVRSH 335
           RYLQD+R+H
Sbjct: 282 RYLQDIRTH 290


>gb|AFK41486.1| unknown [Lotus japonicus]
          Length = 287

 Score =  119 bits (297), Expect = 5e-25
 Identities = 54/69 (78%), Positives = 60/69 (86%)
 Frame = -1

Query: 541 GPQPFKFAGIGGVSEFLGWTDQQRAAAAKEGWAYRLVFSIRLVGLFLVADGLFIGAQQVA 362
           GP P KFAGIGGVSEFLGWTDQQRAAAAKEGW YRLVFS RL+G+ L AD LFIGAQQ+ 
Sbjct: 219 GPVPLKFAGIGGVSEFLGWTDQQRAAAAKEGWGYRLVFSARLLGILLAADALFIGAQQIG 278

Query: 361 RYLQDVRSH 335
            YLQ++R+H
Sbjct: 279 HYLQEIRTH 287


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