BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010170
         (726 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524033.1| delta DNA polymerase, putative [Ricinus comm...   130   4e-28
ref|XP_002325451.1| predicted protein [Populus trichocarpa] gi|2...   129   6e-28
ref|XP_002319772.1| predicted protein [Populus trichocarpa] gi|1...   127   3e-27
gb|ABK93288.1| unknown [Populus trichocarpa]                          124   2e-26
ref|NP_563854.1| DNA polymerase delta subunit 4 [Arabidopsis tha...   120   2e-25

>ref|XP_002524033.1| delta DNA polymerase, putative [Ricinus communis]
           gi|223536760|gb|EEF38401.1| delta DNA polymerase,
           putative [Ricinus communis]
          Length = 126

 Score =  130 bits (326), Expect = 4e-28
 Identities = 60/87 (68%), Positives = 69/87 (79%), Gaps = 1/87 (1%)
 Frame = +2

Query: 272 AAFGSNVTQPPALISHGSP-DLKDDYSEEEEVLRQFDLNMAYGPCVGMSRLGRWERANKL 448
           AA GSN+TQP ALISHG   DL+DDY + EEVLRQFD+NMAYGPC+GM+R+GRWERA +L
Sbjct: 40  AAIGSNITQPTALISHGGALDLQDDYDKNEEVLRQFDMNMAYGPCLGMTRVGRWERAQRL 99

Query: 449 GLNPPKHIEGLLTQANTGLGCLWDGRI 529
           GLNPPK IE LL        CLWDGR+
Sbjct: 100 GLNPPKQIEDLLKGGKVNSECLWDGRV 126


>ref|XP_002325451.1| predicted protein [Populus trichocarpa] gi|222862326|gb|EEE99832.1|
           predicted protein [Populus trichocarpa]
          Length = 121

 Score =  129 bits (324), Expect = 6e-28
 Identities = 59/86 (68%), Positives = 67/86 (77%)
 Frame = +2

Query: 272 AAFGSNVTQPPALISHGSPDLKDDYSEEEEVLRQFDLNMAYGPCVGMSRLGRWERANKLG 451
           A  GS++TQP AL+SH SPDLKDDY + E+VLRQFD+N AYGPC+GMSRL RWERA +LG
Sbjct: 36  ATLGSDITQPTALVSHDSPDLKDDYDKHEDVLRQFDMNPAYGPCLGMSRLARWERAQRLG 95

Query: 452 LNPPKHIEGLLTQANTGLGCLWDGRI 529
           LNPPK IEGLL        CLWDG I
Sbjct: 96  LNPPKEIEGLLKGEKVRSECLWDGCI 121


>ref|XP_002319772.1| predicted protein [Populus trichocarpa] gi|118488437|gb|ABK96033.1|
           unknown [Populus trichocarpa]
           gi|222858148|gb|EEE95695.1| predicted protein [Populus
           trichocarpa]
          Length = 122

 Score =  127 bits (318), Expect = 3e-27
 Identities = 61/115 (53%), Positives = 71/115 (61%)
 Frame = +2

Query: 185 VKDFYRQXXXXXXXXXXXXXXXXXXXXXXAAFGSNVTQPPALISHGSPDLKDDYSEEEEV 364
           +K FYRQ                      A+ GS++TQP A +SHGSPD KD Y E EE+
Sbjct: 8   MKGFYRQKKNKNSGITKPTSSKKSSLHHIASLGSDITQPTAQVSHGSPDHKDYYDEHEEL 67

Query: 365 LRQFDLNMAYGPCVGMSRLGRWERANKLGLNPPKHIEGLLTQANTGLGCLWDGRI 529
           LRQFD+NMAYGPC+GMSRL RWERA +LGLNPP   EGLL        C WDGR+
Sbjct: 68  LRQFDMNMAYGPCLGMSRLARWERAQRLGLNPPNEFEGLLKAEMVQSECWWDGRV 122


>gb|ABK93288.1| unknown [Populus trichocarpa]
          Length = 122

 Score =  124 bits (311), Expect = 2e-26
 Identities = 60/115 (52%), Positives = 70/115 (60%)
 Frame = +2

Query: 185 VKDFYRQXXXXXXXXXXXXXXXXXXXXXXAAFGSNVTQPPALISHGSPDLKDDYSEEEEV 364
           +K FYRQ                      A+ GS++TQP A +SHGSPD KD Y E E +
Sbjct: 8   MKGFYRQKKNKNSGITKPTSSKKSSLHHIASLGSDITQPTAQVSHGSPDHKDYYDEHEGL 67

Query: 365 LRQFDLNMAYGPCVGMSRLGRWERANKLGLNPPKHIEGLLTQANTGLGCLWDGRI 529
           LRQFD+NMAYGPC+GMSRL RWERA +LGLNPP   EGLL        C WDGR+
Sbjct: 68  LRQFDMNMAYGPCLGMSRLARWERAQRLGLNPPNEFEGLLKAEMVQSECWWDGRV 122


>ref|NP_563854.1| DNA polymerase delta subunit 4 [Arabidopsis thaliana]
           gi|98961061|gb|ABF59014.1| At1g09815 [Arabidopsis
           thaliana] gi|332190377|gb|AEE28498.1| DNA polymerase
           delta subunit 4 [Arabidopsis thaliana]
          Length = 124

 Score =  120 bits (302), Expect = 2e-25
 Identities = 55/86 (63%), Positives = 66/86 (76%)
 Frame = +2

Query: 272 AAFGSNVTQPPALISHGSPDLKDDYSEEEEVLRQFDLNMAYGPCVGMSRLGRWERANKLG 451
           AA GS+VTQP ALISHGS DL +DY +EEE+LRQFD+N+ YGPC+GM+RL RWERA +LG
Sbjct: 39  AAQGSDVTQPAALISHGSVDLNEDYDKEEEMLRQFDMNITYGPCLGMTRLDRWERAVRLG 98

Query: 452 LNPPKHIEGLLTQANTGLGCLWDGRI 529
           +NPP  IE LL        CLW GR+
Sbjct: 99  MNPPNEIEKLLKTGKVQQDCLWQGRV 124