BLASTX nr result

ID: Coptis21_contig00010162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010162
         (1396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_197196.1| carbon-sulfur lyase [Arabidopsis thaliana] gi|2...   212   2e-52
ref|XP_002302935.1| predicted protein [Populus trichocarpa] gi|2...   209   2e-51
ref|XP_002302932.1| predicted protein [Populus trichocarpa] gi|2...   208   2e-51
ref|XP_003538389.1| PREDICTED: centromere protein V-like [Glycin...   207   5e-51
emb|CBI34157.3| unnamed protein product [Vitis vinifera]              206   2e-50

>ref|NP_197196.1| carbon-sulfur lyase [Arabidopsis thaliana]
            gi|238481283|ref|NP_001154714.1| carbon-sulfur lyase
            [Arabidopsis thaliana] gi|9755695|emb|CAC01707.1|
            putative protein [Arabidopsis thaliana]
            gi|26451264|dbj|BAC42734.1| unknown protein [Arabidopsis
            thaliana] gi|28973087|gb|AAO63868.1| unknown protein
            [Arabidopsis thaliana] gi|332004977|gb|AED92360.1|
            carbon-sulfur lyase [Arabidopsis thaliana]
            gi|332004978|gb|AED92361.1| carbon-sulfur lyase
            [Arabidopsis thaliana]
          Length = 135

 Score =  212 bits (540), Expect = 2e-52
 Identities = 89/134 (66%), Positives = 111/134 (82%)
 Frame = +2

Query: 803  MDFERIGHSGGCHCGKVRWEVLAPESIVAWKCNCSDCSMRGNIQFIVPSTCFKLAESSNK 982
            M+ E I H GGCHCGK++W V A  S++AW CNCSDCSMRGN+ FIVPS+ F+L + S  
Sbjct: 1    MESELIFHEGGCHCGKIKWRVKAARSVIAWSCNCSDCSMRGNVHFIVPSSNFELLDDSKD 60

Query: 983  FLTTYTFGTHKAKHTFCKVCGITSFYVPRSNPDGISVTLACVDSGTLSHVEIKCFDGRNW 1162
            F+TTYTFGTH AKHTFCKVCGITSFY+PRSNPDG++VT+ CV SGTL+H+E+K +DG+NW
Sbjct: 61   FITTYTFGTHTAKHTFCKVCGITSFYIPRSNPDGVAVTVKCVKSGTLAHIEVKSYDGQNW 120

Query: 1163 ERSYEHSSIASLSK 1204
            E S++ + IAS SK
Sbjct: 121  EMSHKKTGIASFSK 134


>ref|XP_002302935.1| predicted protein [Populus trichocarpa] gi|222844661|gb|EEE82208.1|
            predicted protein [Populus trichocarpa]
          Length = 137

 Score =  209 bits (531), Expect = 2e-51
 Identities = 92/134 (68%), Positives = 106/134 (79%)
 Frame = +2

Query: 803  MDFERIGHSGGCHCGKVRWEVLAPESIVAWKCNCSDCSMRGNIQFIVPSTCFKLAESSNK 982
            M+ + + H+GGCHC +VRW V AP S+VAW CNCSDCSMRGN  FIVPS  F L   S +
Sbjct: 1    MESDMVIHNGGCHCRRVRWRVQAPSSVVAWNCNCSDCSMRGNTHFIVPSEKFDLLGDSKE 60

Query: 983  FLTTYTFGTHKAKHTFCKVCGITSFYVPRSNPDGISVTLACVDSGTLSHVEIKCFDGRNW 1162
            FLTTYTFGTH AKHTFCK CGITSFY+PRSNPDG++VT  CVD GTL+HVEIK +DGRNW
Sbjct: 61   FLTTYTFGTHTAKHTFCKFCGITSFYIPRSNPDGVAVTFRCVDPGTLTHVEIKHYDGRNW 120

Query: 1163 ERSYEHSSIASLSK 1204
            E SY  + IAS S+
Sbjct: 121  ESSYNQTGIASCSQ 134


>ref|XP_002302932.1| predicted protein [Populus trichocarpa] gi|222844658|gb|EEE82205.1|
            predicted protein [Populus trichocarpa]
          Length = 137

 Score =  208 bits (530), Expect = 2e-51
 Identities = 94/134 (70%), Positives = 110/134 (82%)
 Frame = +2

Query: 803  MDFERIGHSGGCHCGKVRWEVLAPESIVAWKCNCSDCSMRGNIQFIVPSTCFKLAESSNK 982
            M+ + + H+GGCHC +VRW V AP S+VAW CNCSDCSMRGNIQFIVPS  F+L   S +
Sbjct: 1    MESDMVIHNGGCHCRRVRWRVQAPSSVVAWNCNCSDCSMRGNIQFIVPSEKFELLGDSKE 60

Query: 983  FLTTYTFGTHKAKHTFCKVCGITSFYVPRSNPDGISVTLACVDSGTLSHVEIKCFDGRNW 1162
            FLTTYTFGTH AKHTFCK CGITSFYVPRS+PDG+S+T  CVD GTL+HVEIK FDG+NW
Sbjct: 61   FLTTYTFGTHTAKHTFCKFCGITSFYVPRSHPDGVSITCRCVDPGTLTHVEIKHFDGQNW 120

Query: 1163 ERSYEHSSIASLSK 1204
            ERSY + + AS S+
Sbjct: 121  ERSY-NQTFASCSQ 133


>ref|XP_003538389.1| PREDICTED: centromere protein V-like [Glycine max]
          Length = 137

 Score =  207 bits (527), Expect = 5e-51
 Identities = 89/136 (65%), Positives = 108/136 (79%)
 Frame = +2

Query: 803  MDFERIGHSGGCHCGKVRWEVLAPESIVAWKCNCSDCSMRGNIQFIVPSTCFKLAESSNK 982
            MD E++ H+GGCHC  VRW+V+AP S+VAW CNCS C MR N  FIVP+  F+L   S K
Sbjct: 1    MDVEKVVHTGGCHCKSVRWKVVAPSSVVAWDCNCSTCYMRANTHFIVPANNFELLGDSEK 60

Query: 983  FLTTYTFGTHKAKHTFCKVCGITSFYVPRSNPDGISVTLACVDSGTLSHVEIKCFDGRNW 1162
            FLTTYTFGTH AKHTFCK+CGITSFY PRSNPDG++VT  CVD GTL+HVEI+ FDG+NW
Sbjct: 61   FLTTYTFGTHTAKHTFCKICGITSFYCPRSNPDGVAVTFRCVDPGTLTHVEIRYFDGKNW 120

Query: 1163 ERSYEHSSIASLSKLE 1210
            + +Y  + I+S SK+E
Sbjct: 121  DSAYTQTGISSYSKVE 136


>emb|CBI34157.3| unnamed protein product [Vitis vinifera]
          Length = 201

 Score =  206 bits (523), Expect = 2e-50
 Identities = 90/139 (64%), Positives = 112/139 (80%)
 Frame = +2

Query: 794  SCGMDFERIGHSGGCHCGKVRWEVLAPESIVAWKCNCSDCSMRGNIQFIVPSTCFKLAES 973
            S  MD +++ HSGGCHC +VRW+V AP S++ WKC+CS+C MRGN  FIVP+  F+L   
Sbjct: 58   SSEMDSKKVVHSGGCHCRRVRWKVEAPASVLVWKCDCSNCFMRGNAHFIVPAEKFELLGD 117

Query: 974  SNKFLTTYTFGTHKAKHTFCKVCGITSFYVPRSNPDGISVTLACVDSGTLSHVEIKCFDG 1153
            S +FLTTYTFGTH AKHTFCK+CGITSFY+PRSN DG++V+  CVD GTL+HVEIK FDG
Sbjct: 118  SKEFLTTYTFGTHTAKHTFCKICGITSFYIPRSNQDGVAVSFMCVDPGTLTHVEIKNFDG 177

Query: 1154 RNWERSYEHSSIASLSKLE 1210
            +NWE SY  S+IAS SK++
Sbjct: 178  KNWENSYIESNIASCSKVQ 196


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