BLASTX nr result

ID: Coptis21_contig00010159 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010159
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329875.1| predicted protein [Populus trichocarpa] gi|2...    55   2e-09
ref|XP_003608722.1| hypothetical protein MTR_4g101030 [Medicago ...    60   1e-07
ref|XP_003549911.1| PREDICTED: uncharacterized protein LOC100804...    58   7e-07
ref|XP_002868124.1| hypothetical protein ARALYDRAFT_355102 [Arab...    58   7e-07
ref|NP_193386.5| uncharacterized protein [Arabidopsis thaliana] ...    58   7e-07

>ref|XP_002329875.1| predicted protein [Populus trichocarpa] gi|222871112|gb|EEF08243.1|
           predicted protein [Populus trichocarpa]
          Length = 232

 Score = 54.7 bits (130), Expect(2) = 2e-09
 Identities = 25/48 (52%), Positives = 28/48 (58%)
 Frame = +3

Query: 30  MGGHGGLNILPQKRWNVYNFDNRXXXXXXXXXXXXXXXXXXXQSRKRD 173
           MGGHGGLNILPQK+WNVYN+DNR                   + RKRD
Sbjct: 1   MGGHGGLNILPQKKWNVYNYDNREKVRKDEEAAARDEQLKREEVRKRD 48



 Score = 32.0 bits (71), Expect(2) = 2e-09
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = +1

Query: 280 LKLAKGLXXXXXXXXXXXXXXXXXXXXESNNNHINLFQGIKVFPFLLSENKE 435
           L+ A+GL                    E  +NHINLF+GIK+F  ++   KE
Sbjct: 56  LRAARGLPPMQKPEEPVPVVEAEASISEPKSNHINLFEGIKIFDPVMGLEKE 107


>ref|XP_003608722.1| hypothetical protein MTR_4g101030 [Medicago truncatula]
           gi|355509777|gb|AES90919.1| hypothetical protein
           MTR_4g101030 [Medicago truncatula]
          Length = 435

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/48 (60%), Positives = 29/48 (60%)
 Frame = +3

Query: 30  MGGHGGLNILPQKRWNVYNFDNRXXXXXXXXXXXXXXXXXXXQSRKRD 173
           MGGHGGLNILPQKRWNVYNFDNR                   QSRKRD
Sbjct: 1   MGGHGGLNILPQKRWNVYNFDNREKVRKDEEAAAKEEQLKREQSRKRD 48


>ref|XP_003549911.1| PREDICTED: uncharacterized protein LOC100804098 [Glycine max]
          Length = 234

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/48 (56%), Positives = 29/48 (60%)
 Frame = +3

Query: 30  MGGHGGLNILPQKRWNVYNFDNRXXXXXXXXXXXXXXXXXXXQSRKRD 173
           MGGHGGLNILPQKRWNVYNFDNR                   ++RKRD
Sbjct: 1   MGGHGGLNILPQKRWNVYNFDNREKVRRDEEQAAREEQLKREETRKRD 48


>ref|XP_002868124.1| hypothetical protein ARALYDRAFT_355102 [Arabidopsis lyrata subsp.
           lyrata] gi|297804530|ref|XP_002870149.1| predicted
           protein [Arabidopsis lyrata subsp. lyrata]
           gi|297313960|gb|EFH44383.1| hypothetical protein
           ARALYDRAFT_355102 [Arabidopsis lyrata subsp. lyrata]
           gi|297315985|gb|EFH46408.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 273

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/48 (56%), Positives = 29/48 (60%)
 Frame = +3

Query: 30  MGGHGGLNILPQKRWNVYNFDNRXXXXXXXXXXXXXXXXXXXQSRKRD 173
           MGGHGGLNILPQKRWNVYNFDNR                   ++RKRD
Sbjct: 1   MGGHGGLNILPQKRWNVYNFDNREKVRKDEEAAAREEQIKREEARKRD 48


>ref|NP_193386.5| uncharacterized protein [Arabidopsis thaliana]
           gi|332658366|gb|AEE83766.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 803

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/48 (56%), Positives = 29/48 (60%)
 Frame = +3

Query: 30  MGGHGGLNILPQKRWNVYNFDNRXXXXXXXXXXXXXXXXXXXQSRKRD 173
           MGGHGGLNILPQKRWNVYNFDNR                   ++RKRD
Sbjct: 552 MGGHGGLNILPQKRWNVYNFDNREKVRKEEEAAAREEQIKREEARKRD 599


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