BLASTX nr result

ID: Coptis21_contig00010157 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010157
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15316.3| unnamed protein product [Vitis vinifera]               76   2e-12
ref|XP_002514641.1| transcription factor, putative [Ricinus comm...    72   4e-11
ref|XP_003634271.1| PREDICTED: transcription factor TCP5-like [V...    72   6e-11
emb|CBI21213.3| unnamed protein product [Vitis vinifera]               65   4e-09
ref|XP_002323903.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09

>emb|CBI15316.3| unnamed protein product [Vitis vinifera]
          Length = 217

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 38/60 (63%), Positives = 44/60 (73%)
 Frame = -2

Query: 182 NER*KMISNSREKGISAKEEVKASETKLTKGSSSSRQWSGLKDPRVVRVSRSFGGKDRHS 3
           +ER KMI NSRE+   AK E    E K +K  SSSRQWS  ++PR+VRVSRSFGGKDRHS
Sbjct: 57  HERSKMIPNSRERDFQAKLEDATIEGKFSKAPSSSRQWSAFRNPRIVRVSRSFGGKDRHS 116


>ref|XP_002514641.1| transcription factor, putative [Ricinus communis]
           gi|223546245|gb|EEF47747.1| transcription factor,
           putative [Ricinus communis]
          Length = 371

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 35/57 (61%), Positives = 45/57 (78%), Gaps = 2/57 (3%)
 Frame = -2

Query: 167 MISNSREKGISAKEEVKASET--KLTKGSSSSRQWSGLKDPRVVRVSRSFGGKDRHS 3
           MI++SREKG  AK+E  A++   K +K  S+SRQWS  ++PR+VRVSRSFGGKDRHS
Sbjct: 1   MITSSREKGFQAKQEGDANDNNKKFSKAPSTSRQWSAFRNPRIVRVSRSFGGKDRHS 57


>ref|XP_003634271.1| PREDICTED: transcription factor TCP5-like [Vitis vinifera]
          Length = 383

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 35/55 (63%), Positives = 40/55 (72%)
 Frame = -2

Query: 167 MISNSREKGISAKEEVKASETKLTKGSSSSRQWSGLKDPRVVRVSRSFGGKDRHS 3
           MI NSRE+   AK E    E K +K  SSSRQWS  ++PR+VRVSRSFGGKDRHS
Sbjct: 1   MIPNSRERDFQAKLEDATIEGKFSKAPSSSRQWSAFRNPRIVRVSRSFGGKDRHS 55


>emb|CBI21213.3| unnamed protein product [Vitis vinifera]
          Length = 465

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 31/53 (58%), Positives = 39/53 (73%)
 Frame = -2

Query: 161 SNSREKGISAKEEVKASETKLTKGSSSSRQWSGLKDPRVVRVSRSFGGKDRHS 3
           +NSRE   SAK E   S+ ++ K SS+S  W  LKDPR+VRVSR++GGKDRHS
Sbjct: 91  TNSREADFSAKLEGDESDARIAKNSSTSTPWLRLKDPRIVRVSRAYGGKDRHS 143


>ref|XP_002323903.1| predicted protein [Populus trichocarpa] gi|222866905|gb|EEF04036.1|
           predicted protein [Populus trichocarpa]
          Length = 333

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 31/55 (56%), Positives = 41/55 (74%)
 Frame = -2

Query: 167 MISNSREKGISAKEEVKASETKLTKGSSSSRQWSGLKDPRVVRVSRSFGGKDRHS 3
           MI++S+E     K+E   ++ K++K SSSS  W  LKDPR+VRVSR+FGGKDRHS
Sbjct: 1   MITSSKEVDCPPKKEDDTNDGKISKASSSSAPWLRLKDPRIVRVSRAFGGKDRHS 55


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