BLASTX nr result

ID: Coptis21_contig00010156 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010156
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528989.1| conserved hypothetical protein [Ricinus comm...    72   6e-11
ref|XP_002276745.2| PREDICTED: uncharacterized protein LOC100252...    72   8e-11
ref|XP_002306329.1| predicted protein [Populus trichocarpa] gi|2...    69   7e-10
ref|XP_002309996.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_003537506.1| PREDICTED: uncharacterized protein LOC100816...    65   7e-09

>ref|XP_002528989.1| conserved hypothetical protein [Ricinus communis]
           gi|223531579|gb|EEF33408.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 661

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 38/64 (59%), Positives = 42/64 (65%)
 Frame = +3

Query: 102 ITNPHTVRERLXXXXXXXXXXXXXXXIVTLDDLFRKTRATPRIYYLPLSEEQVAAKFATQ 281
           ++NP   +ERL               IVTLDDLFRKTRATPRIYYLPLSEEQVAAK   +
Sbjct: 596 LSNPPPAKERLGHPPPTPLPEKHDPPIVTLDDLFRKTRATPRIYYLPLSEEQVAAKLTER 655

Query: 282 TKNA 293
            KNA
Sbjct: 656 GKNA 659


>ref|XP_002276745.2| PREDICTED: uncharacterized protein LOC100252593 [Vitis vinifera]
          Length = 691

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 42/83 (50%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
 Frame = +3

Query: 51  RQNVLKQQLXXXXXXXX---ITNPHTVRERLXXXXXXXXXXXXXXXIVTLDDLFRKTRAT 221
           R+ V +QQL           ++NP   RERL               IVTLDDLF+KT+AT
Sbjct: 577 RKQVTRQQLPPPPPLPPPPPLSNPPQTRERLPLPPPPPLPEKVDPPIVTLDDLFQKTKAT 636

Query: 222 PRIYYLPLSEEQVAAKFATQTKN 290
           PRIYYLPLSEEQVAAK   Q KN
Sbjct: 637 PRIYYLPLSEEQVAAKLKAQGKN 659


>ref|XP_002306329.1| predicted protein [Populus trichocarpa] gi|222855778|gb|EEE93325.1|
           predicted protein [Populus trichocarpa]
          Length = 690

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 41/83 (49%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
 Frame = +3

Query: 51  RQNVLKQQLXXXXXXXX---ITNPHTVRERLXXXXXXXXXXXXXXXIVTLDDLFRKTRAT 221
           RQ V +QQL           ++NP   RER+               IVTLDDLFRKT+  
Sbjct: 605 RQQVSRQQLPPPPSLPLPPPLSNPPHARERVDLPPPPPLPEKHDPPIVTLDDLFRKTKTA 664

Query: 222 PRIYYLPLSEEQVAAKFATQTKN 290
           PRIYYLPLSEEQVAAK A   KN
Sbjct: 665 PRIYYLPLSEEQVAAKLAGHGKN 687


>ref|XP_002309996.1| predicted protein [Populus trichocarpa] gi|222852899|gb|EEE90446.1|
           predicted protein [Populus trichocarpa]
          Length = 582

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 40/83 (48%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
 Frame = +3

Query: 51  RQNVLKQQLXXXXXXXX---ITNPHTVRERLXXXXXXXXXXXXXXXIVTLDDLFRKTRAT 221
           RQ V +QQL           ++NP   RER+               IVTLDDLFRKT+  
Sbjct: 497 RQQVSRQQLPPPPSLPPPPPLSNPPHARERVDLPPPPPLPEKHDPPIVTLDDLFRKTKTA 556

Query: 222 PRIYYLPLSEEQVAAKFATQTKN 290
           PRIYYLPL EEQVAAK A + KN
Sbjct: 557 PRIYYLPLLEEQVAAKLAERGKN 579


>ref|XP_003537506.1| PREDICTED: uncharacterized protein LOC100816245 [Glycine max]
          Length = 705

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 32/37 (86%), Positives = 34/37 (91%)
 Frame = +3

Query: 180 IVTLDDLFRKTRATPRIYYLPLSEEQVAAKFATQTKN 290
           IVTLDDLFRKT ATPRIYYLPLSEEQVAAK +TQ K+
Sbjct: 666 IVTLDDLFRKTTATPRIYYLPLSEEQVAAKLSTQGKS 702


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