BLASTX nr result

ID: Coptis21_contig00010149 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010149
         (1017 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325987.1| predicted protein [Populus trichocarpa] gi|2...   108   3e-21
ref|XP_002263051.1| PREDICTED: uncharacterized protein LOC100266...   105   2e-20
ref|XP_002327249.1| predicted protein [Populus trichocarpa] gi|2...    99   1e-18
ref|XP_002533873.1| conserved hypothetical protein [Ricinus comm...    99   2e-18
gb|ABK94498.1| unknown [Populus trichocarpa]                           99   2e-18

>ref|XP_002325987.1| predicted protein [Populus trichocarpa] gi|222862862|gb|EEF00369.1|
           predicted protein [Populus trichocarpa]
          Length = 208

 Score =  108 bits (269), Expect = 3e-21
 Identities = 64/131 (48%), Positives = 83/131 (63%), Gaps = 9/131 (6%)
 Frame = +1

Query: 253 FSWEQQPGIPKTSSHCP--SKSIDVLPLPPSAVSTP-SKRFSLETIFSSGKRNTYRSLER 423
           FSWE  PGIPK  S+    S S+  LPLPP A ST  SKRF+   I    K+N+  S  R
Sbjct: 72  FSWEHLPGIPKKQSYKKKDSSSLKELPLPPPAASTSISKRFNSGEI-GIRKKNSNDSFRR 130

Query: 424 DPFAAALVECSKDVDHQKEI---EKYW---KISKVVGDPFGFMDRYTSCKKSCAVVESVM 585
           DPF AALV+CSKD D  ++      +W   K+S+   D FGF++ YTSCKK+CAV ES++
Sbjct: 131 DPFFAALVQCSKDDDDDEQDLSNNNFWGGPKVSRRTSDRFGFINLYTSCKKTCAVSESIV 190

Query: 586 LLPRSTPKAYN 618
            LPRS+  +Y+
Sbjct: 191 YLPRSSRTSYD 201


>ref|XP_002263051.1| PREDICTED: uncharacterized protein LOC100266309 [Vitis vinifera]
          Length = 199

 Score =  105 bits (262), Expect = 2e-20
 Identities = 59/130 (45%), Positives = 76/130 (58%), Gaps = 8/130 (6%)
 Frame = +1

Query: 253 FSWEQQPGIPK--TSSHCPSKSIDVLPLPPSAVSTPSKRFS---LETIFSSGKRNTYRSL 417
           FSWE+ PGIPK   S    +  + +LPLPPS   TPSKRF+    ET     K N   S 
Sbjct: 63  FSWEKIPGIPKKQASRKKENSPLSLLPLPPSTTPTPSKRFNHQDQETSTIRKKNNISESF 122

Query: 418 ERDPFAAALVECSKDVDHQKEIEKYWKISKV---VGDPFGFMDRYTSCKKSCAVVESVML 588
            RDPF AA VEC K+ + Q+     WK SKV   + D  G ++ YTSCK++C V ES+ L
Sbjct: 123 RRDPFFAAFVECCKEDEDQETSPNIWKSSKVPRNLSDRLGLINIYTSCKRTCTVSESITL 182

Query: 589 LPRSTPKAYN 618
           +PRS   +Y+
Sbjct: 183 VPRSARSSYH 192


>ref|XP_002327249.1| predicted protein [Populus trichocarpa] gi|222835619|gb|EEE74054.1|
           predicted protein [Populus trichocarpa]
          Length = 201

 Score = 99.4 bits (246), Expect = 1e-18
 Identities = 57/127 (44%), Positives = 77/127 (60%), Gaps = 5/127 (3%)
 Frame = +1

Query: 253 FSWEQQPGIPKTSSHCPSKS-IDVLPLPPSAV-STPSKRFSLETIFSSGKRNTYRSLERD 426
           FSWE  PGIPK  S+    S +  LPLPP A  ++ S+R + E I    K N   S  RD
Sbjct: 69  FSWEHLPGIPKKQSYKKKDSTLKALPLPPPAAPASISRRINSEEIGIRKKHNN-ESFRRD 127

Query: 427 PFAAALVECSKDVDHQKEIEKYW---KISKVVGDPFGFMDRYTSCKKSCAVVESVMLLPR 597
           PF AALV+CSKD D   +   +W   K+S+ + D FGF+  YTSCKK+  V +S++ LPR
Sbjct: 128 PFFAALVQCSKDDDDDYQGSDFWGGAKVSRSISDRFGFVSLYTSCKKTSDVSDSIVYLPR 187

Query: 598 STPKAYN 618
           S+  +Y+
Sbjct: 188 SSRTSYD 194


>ref|XP_002533873.1| conserved hypothetical protein [Ricinus communis]
           gi|223526174|gb|EEF28504.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 201

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 61/128 (47%), Positives = 75/128 (58%), Gaps = 6/128 (4%)
 Frame = +1

Query: 253 FSWEQQPGIPKTSSHCPSKSI--DVLPLPPSAVSTPSKRFSLETIFSSGKRNTYRSLERD 426
           FSWE  PGIPK SSH    +    VLPLPP A+   SKRFS     S G R        D
Sbjct: 79  FSWEHLPGIPKKSSHKKKDTALTKVLPLPPPAMPQCSKRFSE----SFGNR--------D 126

Query: 427 PFAAALVECSKD-VDHQKEIEKYW---KISKVVGDPFGFMDRYTSCKKSCAVVESVMLLP 594
           PF AALV CSKD  D  +     W   K+S+ + D FGF++ YTSCK++CAV ES++ LP
Sbjct: 127 PFFAALVACSKDDSDDNESGSNLWSGAKVSRSISDRFGFINLYTSCKRTCAVSESIVYLP 186

Query: 595 RSTPKAYN 618
           RS   +Y+
Sbjct: 187 RSNRTSYD 194


>gb|ABK94498.1| unknown [Populus trichocarpa]
          Length = 201

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 57/127 (44%), Positives = 76/127 (59%), Gaps = 5/127 (3%)
 Frame = +1

Query: 253 FSWEQQPGIPKTSSHCPSKSID-VLPLPPSAV-STPSKRFSLETIFSSGKRNTYRSLERD 426
           FSWE  PGIPK  S+    S    LPLPP A  ++ S+R + E I    K N   S  RD
Sbjct: 69  FSWEHLPGIPKKQSYKKKDSTSKALPLPPPAAPASISRRINSEEIGIRKKHNN-ESFRRD 127

Query: 427 PFAAALVECSKDVDHQKEIEKYW---KISKVVGDPFGFMDRYTSCKKSCAVVESVMLLPR 597
           PF AALV+CSKD D   +   +W   K+S+ + D FGF+  YTSCKK+  V +S++ LPR
Sbjct: 128 PFFAALVQCSKDDDDDYQGSDFWGGAKVSRSISDRFGFVSLYTSCKKTSDVSDSIVYLPR 187

Query: 598 STPKAYN 618
           S+  +Y+
Sbjct: 188 SSRTSYD 194


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