BLASTX nr result

ID: Coptis21_contig00010140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010140
         (948 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271757.1| PREDICTED: E3 ubiquitin-protein ligase SINA-...   239   9e-61
emb|CAN77431.1| hypothetical protein VITISV_037121 [Vitis vinifera]   234   3e-59
ref|XP_002327611.1| predicted protein [Populus trichocarpa] gi|2...   220   4e-55
ref|XP_002532642.1| ubiquitin-protein ligase, putative [Ricinus ...   219   6e-55
ref|XP_003531068.1| PREDICTED: E3 ubiquitin-protein ligase SINA-...   219   7e-55

>ref|XP_002271757.1| PREDICTED: E3 ubiquitin-protein ligase SINA-like 10 [Vitis
           vinifera]
          Length = 355

 Score =  239 bits (609), Expect = 9e-61
 Identities = 114/218 (52%), Positives = 160/218 (73%), Gaps = 3/218 (1%)
 Frame = +1

Query: 1   QCENGHIACSTCCTKLGNKCPTCSWPIGYNRCLAIEKVIESIKVPCAYQSYGCGETVSFV 180
           QCENGHIACS+CCTKL N+CP+CSWPIGYNRC AIEKV+ES+KV C   +YGC ETVS+ 
Sbjct: 127 QCENGHIACSSCCTKLSNRCPSCSWPIGYNRCRAIEKVLESVKVSCQNTAYGCKETVSYG 186

Query: 181 QKHKHEETCIYAPCRCPISDCDYRGSLKQMSIHFSTKHSSSGRRFQYN--LPFSVSFGKL 354
           +KH HE TC Y PC CP S+C++RGS KQ++ HF +KH +S  RFQYN   P  + F  +
Sbjct: 187 KKHDHEVTCNYVPCSCPHSNCNFRGSSKQLAQHFRSKHLNSVIRFQYNSFFPVHLEFNAV 246

Query: 355 ESYCVFQGEEDGRLFVLNNQIELIGSAITVTCLGPKSSSQGFSYELISRKGGSSLRMQSY 534
           + +C+ + +E G LF++++ I+ +G A+TV  +GP+ SS+G ++ L + KG  S+ +QS+
Sbjct: 247 DKFCILEAKE-GALFIVSSSIQQLGHAVTVCRIGPR-SSRGHAFNLAAWKGDRSIMLQSF 304

Query: 535 TKCVQERPE-ESSSLEFLLVPYNFYCPDSGKLKLEICI 645
           T+ ++E  E  S S+ FLL+P N +   SG+LKLE+CI
Sbjct: 305 TENIREVVELPSLSMGFLLIP-NAFLGSSGQLKLELCI 341


>emb|CAN77431.1| hypothetical protein VITISV_037121 [Vitis vinifera]
          Length = 355

 Score =  234 bits (596), Expect = 3e-59
 Identities = 112/218 (51%), Positives = 158/218 (72%), Gaps = 3/218 (1%)
 Frame = +1

Query: 1   QCENGHIACSTCCTKLGNKCPTCSWPIGYNRCLAIEKVIESIKVPCAYQSYGCGETVSFV 180
           QCENGHIACS+CCTKL N+CP+CSWPIGYNRC AIEKV+ES+KV C   +YGC ETVS+ 
Sbjct: 127 QCENGHIACSSCCTKLSNRCPSCSWPIGYNRCRAIEKVLESVKVSCQNTAYGCKETVSYX 186

Query: 181 QKHKHEETCIYAPCRCPISDCDYRGSLKQMSIHFSTKHSSSGRRFQYN--LPFSVSFGKL 354
           +K  HE TC Y PC CP S+C++RGS KQ++ HF +KH +S  RFQYN   P  + F  +
Sbjct: 187 KKXDHEVTCNYVPCSCPHSNCNFRGSSKQLAQHFRSKHLNSVIRFQYNSFFPVHLEFNAV 246

Query: 355 ESYCVFQGEEDGRLFVLNNQIELIGSAITVTCLGPKSSSQGFSYELISRKGGSSLRMQSY 534
           + +C+ + +E G LF++++ I+ +G A+TV  +GP+ SS+G ++ L + KG  S+ +QS+
Sbjct: 247 DKFCILEAKE-GALFIVSSSIQQLGHAVTVCRIGPR-SSRGHAFNLAAWKGDRSIMLQSF 304

Query: 535 TKCVQERPE-ESSSLEFLLVPYNFYCPDSGKLKLEICI 645
           T+ ++E     S S+ FLL+P N +   SG+LKLE+CI
Sbjct: 305 TENIREVVXLPSLSMGFLLIP-NAFLGSSGQLKLELCI 341


>ref|XP_002327611.1| predicted protein [Populus trichocarpa] gi|222836165|gb|EEE74586.1|
           predicted protein [Populus trichocarpa]
          Length = 372

 Score =  220 bits (560), Expect = 4e-55
 Identities = 101/215 (46%), Positives = 147/215 (68%)
 Frame = +1

Query: 1   QCENGHIACSTCCTKLGNKCPTCSWPIGYNRCLAIEKVIESIKVPCAYQSYGCGETVSFV 180
           QC+NGH ACS+CC KL +KCP+C+ PIGYNRC AIEKV+ES+KV C+  SYGC E++ + 
Sbjct: 139 QCDNGHTACSSCCIKLQHKCPSCTMPIGYNRCRAIEKVLESLKVSCSNSSYGCKESICYS 198

Query: 181 QKHKHEETCIYAPCRCPISDCDYRGSLKQMSIHFSTKHSSSGRRFQYNLPFSVSFGKLES 360
           +K++H+++C +APC CP+  C+Y+GS K++  H   KH      FQ+N  F + F     
Sbjct: 199 KKYEHDKSCTHAPCTCPLPACNYQGSSKRLYQHCRIKHLCDLTSFQFNTSFPLFFMVDHK 258

Query: 361 YCVFQGEEDGRLFVLNNQIELIGSAITVTCLGPKSSSQGFSYELISRKGGSSLRMQSYTK 540
           + V Q E++  LF+L N+ E +G+ ITV+C+GP SS QG+ YEL ++  GS++R QS T+
Sbjct: 259 FRVLQEEKEDVLFILTNRSECLGNVITVSCMGPSSSKQGYFYELTAKAEGSNVRFQSSTR 318

Query: 541 CVQERPEESSSLEFLLVPYNFYCPDSGKLKLEICI 645
            +Q R +   SL FLLVP N +    G + L++CI
Sbjct: 319 NIQTRVDHPPSLGFLLVP-NDFLGTHGGITLDVCI 352


>ref|XP_002532642.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527633|gb|EEF29745.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 374

 Score =  219 bits (559), Expect = 6e-55
 Identities = 104/216 (48%), Positives = 145/216 (67%), Gaps = 1/216 (0%)
 Frame = +1

Query: 1   QCENGHIACSTCCTKLGNKCPTCSWPIGYNRCLAIEKVIESIKVPCAYQSYGCGETVSFV 180
           QCENGH ACS+CC KL +KCP+CS PIGYNRC AIEKV+ES+K+PC    YGC E VS+ 
Sbjct: 135 QCENGHTACSSCCRKLAHKCPSCSLPIGYNRCRAIEKVLESVKLPCHNLKYGCKEMVSYS 194

Query: 181 QKHKHEETCIYAPCRCPISDCDYRGSLKQMSIHFSTKHSSSGRRFQYNLPFSVSFGKLES 360
           +K  H++ C  APC CP+S C + GS +Q+  HFS KH  S   F+YN+ F V F   + 
Sbjct: 195 KKLDHDKICNNAPCSCPLSGCSFVGSSRQLYQHFSIKHKGSAAPFRYNITFPVFFTLNDK 254

Query: 361 YCVFQGEEDGRLFVLNNQIELIGSAITVTCLGPKSSSQGFSYELISRKGGSSLRMQSYTK 540
             + Q E++G +F L N  E++G+ ITV CLG  SS  G+ YEL +R  GS+L+ QS+TK
Sbjct: 255 SLILQEEKEGVVFFLKNTAEILGNVITVNCLGGPSSKGGYFYELAARMEGSNLKFQSFTK 314

Query: 541 CVQE-RPEESSSLEFLLVPYNFYCPDSGKLKLEICI 645
            +Q+   ++  S  FL++P +F+    G++ L++CI
Sbjct: 315 NIQKVNHDDPHSDTFLIIPGSFF-GSYGQISLDLCI 349


>ref|XP_003531068.1| PREDICTED: E3 ubiquitin-protein ligase SINA-like 10-like [Glycine
           max]
          Length = 320

 Score =  219 bits (558), Expect = 7e-55
 Identities = 103/217 (47%), Positives = 150/217 (69%)
 Frame = +1

Query: 1   QCENGHIACSTCCTKLGNKCPTCSWPIGYNRCLAIEKVIESIKVPCAYQSYGCGETVSFV 180
           QCENGHIACS CC +L NKCP CS PIGYNRC AIEKV+E IK+ C   +YGC ET+S+ 
Sbjct: 105 QCENGHIACSICCVRLSNKCPMCSMPIGYNRCRAIEKVLECIKMSCPNANYGCKETLSYS 164

Query: 181 QKHKHEETCIYAPCRCPISDCDYRGSLKQMSIHFSTKHSSSGRRFQYNLPFSVSFGKLES 360
           +K++HE+ CIY PC CP + CD+  S K++ +HFS +H  SG +F Y+  F+V     + 
Sbjct: 165 KKNEHEKECIYLPCSCPFTGCDFIASSKELFLHFSHRHVGSGTQFTYDKFFTVFLSINQR 224

Query: 361 YCVFQGEEDGRLFVLNNQIELIGSAITVTCLGPKSSSQGFSYELISRKGGSSLRMQSYTK 540
             V + + DG LFV++N +E +G+ + ++C+GPKS+++ F YE+++R  G++L +QS+TK
Sbjct: 225 TVVLKEKSDGNLFVVHNNLEHLGNIVRISCIGPKSTTE-FQYEVLARHQGNALILQSFTK 283

Query: 541 CVQERPEESSSLEFLLVPYNFYCPDSGKLKLEICISS 651
            VQ +  ++ S  FLL+P   +   S  LKL+I I S
Sbjct: 284 IVQGQYTDAPSSTFLLIPSCLF--GSPHLKLDIRIKS 318


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