BLASTX nr result

ID: Coptis21_contig00010127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010127
         (840 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19378.3| unnamed protein product [Vitis vinifera]              130   4e-28
ref|XP_002320664.1| predicted protein [Populus trichocarpa] gi|2...   121   2e-25
ref|XP_003634344.1| PREDICTED: uncharacterized protein LOC100267...   119   1e-24
ref|XP_002525295.1| conserved hypothetical protein [Ricinus comm...   118   2e-24
ref|XP_002301143.1| predicted protein [Populus trichocarpa] gi|2...   107   3e-21

>emb|CBI19378.3| unnamed protein product [Vitis vinifera]
          Length = 152

 Score =  130 bits (327), Expect = 4e-28
 Identities = 67/145 (46%), Positives = 97/145 (66%), Gaps = 1/145 (0%)
 Frame = +3

Query: 192 AKHESVFIRCVKAPFRILGRARDFYVRSLTDCSGRMSEASVIGYPGGSVNIVPRSFSVNS 371
           A+ ++ F+R +  P R+L +ARDFYVRSLTD + R+S  + +G PG  ++ +P+SFSV+S
Sbjct: 5   AQSQNRFMRIITIPIRVLSKARDFYVRSLTDAAERVSRGNAMGCPGVHISTLPKSFSVSS 64

Query: 372 SRTNDDEDIKELMRAASQRGLREKLEMEIQQLQQLSKKTDALPRSRTVAIGRIDEDKPCD 551
           SR+ D ED+  L R+ S      +++M +  LQ     + A PRS +V +GRIDED+PCD
Sbjct: 65  SRSGDGEDVGSLSRSGSASSSSNRVDMNV-FLQPPKMGSRAAPRSCSVGMGRIDEDRPCD 123

Query: 552 FVED-LKSKPDLLYPRSKSYAVSKK 623
           F ED    K D LYPRS+SYAV+ +
Sbjct: 124 FEEDSFNVKADFLYPRSRSYAVTNR 148


>ref|XP_002320664.1| predicted protein [Populus trichocarpa] gi|222861437|gb|EEE98979.1|
           predicted protein [Populus trichocarpa]
          Length = 158

 Score =  121 bits (303), Expect = 2e-25
 Identities = 72/159 (45%), Positives = 103/159 (64%), Gaps = 12/159 (7%)
 Frame = +3

Query: 183 NRAAKHESVFIRCVKAPFRILGRARDFYVRSLTDCSGRMSEASVIGYPGGSVNIVPRSFS 362
           N+ ++ ES   + +KAP RIL RARDFY++ + + S    +  V+  P G+ N +PRS+S
Sbjct: 4   NKKSRKESTLKKILKAPLRILARARDFYIKGMAEYS---DQVCVMSCPTGNFNTMPRSYS 60

Query: 363 VNSSRTND-DEDIKELMRAASQRG----LREKLEMEIQQLQQLSKKTDA------LPRSR 509
           V+S++ N  D+D +E +RAAS R        K+ +++   QQ S K  A      +PRS 
Sbjct: 61  VSSTKPNHLDDDRREPLRAASTRSNLGSRNSKINVDVPARQQYSHKKSATRLGDNMPRSH 120

Query: 510 TVAIGRIDEDKPCDF-VEDLKSKPDLLYPRSKSYAVSKK 623
           TVAIGRIDE+KPCDF  ED+K K + +YPRS+SYAVSK+
Sbjct: 121 TVAIGRIDEEKPCDFDEEDVKVKTN-VYPRSRSYAVSKR 158


>ref|XP_003634344.1| PREDICTED: uncharacterized protein LOC100267722 [Vitis vinifera]
          Length = 149

 Score =  119 bits (297), Expect = 1e-24
 Identities = 65/147 (44%), Positives = 100/147 (68%), Gaps = 2/147 (1%)
 Frame = +3

Query: 192 AKHESVFIRCVKAPFRILGRARDFYVRSLTDCSGRMSEASVIGYPGGSVNIVPRSFSVNS 371
           A +++ F+R +  P R+LG+A+D YVR +T+C+ R    + +G P G    +PRS+S  S
Sbjct: 5   AHNQNRFMRIITLPIRVLGKAKDLYVRGMTNCATR-GYGNNMGGPAG----MPRSYSYAS 59

Query: 372 SRTNDDEDIKELMRAASQRGLREKLEMEIQQLQQLSKKTDALPRSRTVAIGRIDEDKPC- 548
           SR+ND+ED +EL+RAAS   L   +++     Q  ++K+  +PRS +V + RIDED PC 
Sbjct: 60  SRSNDNEDFRELVRAASVNTLGHGVDLNALLQQSAAEKSKVVPRSCSVGMARIDEDGPCN 119

Query: 549 DFVE-DLKSKPDLLYPRSKSYAVSKKN 626
           DF E + K+K DL+YPRS+SYAV+K++
Sbjct: 120 DFGEVNFKAKADLMYPRSRSYAVTKRS 146


>ref|XP_002525295.1| conserved hypothetical protein [Ricinus communis]
           gi|223535453|gb|EEF37123.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 164

 Score =  118 bits (295), Expect = 2e-24
 Identities = 66/163 (40%), Positives = 109/163 (66%), Gaps = 9/163 (5%)
 Frame = +3

Query: 180 SNRAAKHESVFIRCVKAPFRILGRARDFYVRSLTDCSGRMSEASVIGYPGGS-VNIVPRS 356
           + +    +S   + +K+P RIL +ARDFYV+S+T+ S R+   + +G P G  V  +P+S
Sbjct: 3   TKKPVNKQSKISKFIKSPLRILLKARDFYVKSMTEYSDRIGYGTFMGCPTGHVVETLPKS 62

Query: 357 FSVNSSRTND-DEDIKELMRAASQRGLREKLEMEIQQLQQLSKKTD------ALPRSRTV 515
           +SVNS++++  D+D +EL+RAAS RGL  + ++ + Q QQ  K  +      ++PRS +V
Sbjct: 63  YSVNSTKSSSRDDDYRELLRAASTRGLSSRNDLGVLQRQQSRKSPNNTRANISMPRSHSV 122

Query: 516 AIGRIDEDKPCDFVEDLKSKPDLLYPRSKSYAVS-KKNTSKLW 641
            IGRIDE+K CD  +D+K K D ++PRS+S+AVS  + T++++
Sbjct: 123 GIGRIDEEKACDNFDDIKVKTD-VFPRSRSHAVSATRRTTRMY 164


>ref|XP_002301143.1| predicted protein [Populus trichocarpa] gi|222842869|gb|EEE80416.1|
           predicted protein [Populus trichocarpa]
          Length = 160

 Score =  107 bits (267), Expect = 3e-21
 Identities = 70/156 (44%), Positives = 93/156 (59%), Gaps = 12/156 (7%)
 Frame = +3

Query: 192 AKHESVFIRCVKAPFRILGRARDFYVRSLTDCSGRMSEASVIGYPGGSVNIVPRSFSVNS 371
           A ++S F+R V  P R+L +ARD YV+S+ DCS RM     +  P G    +P SFS+ S
Sbjct: 5   AHNQSKFMRVVAIPVRLLCKARDVYVKSIIDCSTRMGYGHSMALPTGRYPPLPWSFSIGS 64

Query: 372 SRTNDDEDIKELMRAASQR--GLREKLEMEIQQLQQLSKKTDA-----LPRSRTVA---I 521
           SR ND+ED ++L+RAAS R  G R ++EM IQQL+Q            LP+S       +
Sbjct: 65  SRCNDNEDYRKLVRAASARSLGQRNEIEMFIQQLRQQQSSIMVGSKMFLPKSCGFGMGIM 124

Query: 522 GRIDEDKPCDFVEDLKS--KPDLLYPRSKSYAVSKK 623
           GRID DKPCDF     +  KP  L PRS+S+AV +K
Sbjct: 125 GRIDGDKPCDFETGAGAVVKPQ-LGPRSRSFAVGRK 159


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