BLASTX nr result

ID: Coptis21_contig00010122 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010122
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284798.1| PREDICTED: uncharacterized protein LOC100256...    59   5e-07
ref|XP_004171859.1| PREDICTED: thionin-like protein 2-like [Cucu...    57   2e-06
ref|NP_001184973.1| uncharacterized protein [Arabidopsis thalian...    55   6e-06

>ref|XP_002284798.1| PREDICTED: uncharacterized protein LOC100256715 [Vitis vinifera]
          Length = 127

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/56 (51%), Positives = 39/56 (69%), Gaps = 6/56 (10%)
 Frame = -2

Query: 431 CLKQCLFPN------TSDIHHYYCKLGCETAKCTSVSTLENPAGKKAVEECANSCS 282
           CLK C+ P+      T+D   Y+CKLGC ++ CT++ST +NPAG+K VE C NSCS
Sbjct: 53  CLKDCVIPSHPLDIETADTT-YFCKLGCASSLCTNLSTKKNPAGEK-VESCVNSCS 106


>ref|XP_004171859.1| PREDICTED: thionin-like protein 2-like [Cucumis sativus]
          Length = 108

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/57 (47%), Positives = 36/57 (63%), Gaps = 6/57 (10%)
 Frame = -2

Query: 431 CLKQCLFPNTSDIH------HYYCKLGCETAKCTSVSTLENPAGKKAVEECANSCSE 279
           CL  CLF  +S +       HY+CKLGC T++CT  ST ++PA KK VE C N+C +
Sbjct: 48  CLADCLFIASSPMDLNYMDTHYFCKLGCATSRCTKFSTKKDPAEKK-VESCVNTCDQ 103


>ref|NP_001184973.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332190792|gb|AEE28913.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 104

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 8/59 (13%)
 Frame = -2

Query: 431 CLKQCLFP------NTSDIHH--YYCKLGCETAKCTSVSTLENPAGKKAVEECANSCSE 279
           C+K CL P      +T++I+H  YYCKLGC T  C S+S+++NP   K V +C +SCS+
Sbjct: 41  CIKTCLEPPSSQMDSTNEINHNDYYCKLGCSTHHCASLSSIQNPNVDKVV-DCVDSCSD 98


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