BLASTX nr result

ID: Coptis21_contig00010105 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010105
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274218.2| PREDICTED: 60S ribosomal protein L10a-1-like...   115   3e-24
ref|XP_002282641.1| PREDICTED: 60S ribosomal protein L10a-1-like...   115   4e-24
ref|XP_004149255.1| PREDICTED: 60S ribosomal protein L10a-1-like...   114   6e-24
dbj|BAD09090.1| putative 60S ribosomal protein L10A (RPL10aC) [O...   114   6e-24
ref|NP_001236946.1| uncharacterized protein LOC100305550 [Glycin...   114   6e-24

>ref|XP_002274218.2| PREDICTED: 60S ribosomal protein L10a-1-like [Vitis vinifera]
          Length = 216

 Score =  115 bits (289), Expect = 3e-24
 Identities = 59/78 (75%), Positives = 61/78 (78%)
 Frame = +1

Query: 1   KMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXHHAFLASEAVIKQIP 180
           KMKVCMLGDAQHVEEAEKIGL+YMDVEG                 +HAFLASEAVIKQIP
Sbjct: 61  KMKVCMLGDAQHVEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 181 RLLGPGLNKAGKFPTLVT 234
           RLLGPGLNKAGKFPTLVT
Sbjct: 121 RLLGPGLNKAGKFPTLVT 138


>ref|XP_002282641.1| PREDICTED: 60S ribosomal protein L10a-1-like [Vitis vinifera]
          Length = 216

 Score =  115 bits (288), Expect = 4e-24
 Identities = 58/78 (74%), Positives = 61/78 (78%)
 Frame = +1

Query: 1   KMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXHHAFLASEAVIKQIP 180
           KMK+CMLGDAQHVEEAEKIGL+YMDVEG                 +HAFLASEAVIKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKIGLEYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 181 RLLGPGLNKAGKFPTLVT 234
           RLLGPGLNKAGKFPTLVT
Sbjct: 121 RLLGPGLNKAGKFPTLVT 138


>ref|XP_004149255.1| PREDICTED: 60S ribosomal protein L10a-1-like [Cucumis sativus]
           gi|449516181|ref|XP_004165126.1| PREDICTED: 60S
           ribosomal protein L10a-1-like [Cucumis sativus]
          Length = 216

 Score =  114 bits (286), Expect = 6e-24
 Identities = 57/78 (73%), Positives = 60/78 (76%)
 Frame = +1

Query: 1   KMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXHHAFLASEAVIKQIP 180
           KMK+CMLGDA HVEEAEKIGLDYMDVEG                 +HAFLASEA+IKQIP
Sbjct: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 181 RLLGPGLNKAGKFPTLVT 234
           RLLGPGLNKAGKFPTLVT
Sbjct: 121 RLLGPGLNKAGKFPTLVT 138


>dbj|BAD09090.1| putative 60S ribosomal protein L10A (RPL10aC) [Oryza sativa
           Japonica Group] gi|215692561|dbj|BAG87981.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 216

 Score =  114 bits (286), Expect = 6e-24
 Identities = 58/78 (74%), Positives = 60/78 (76%)
 Frame = +1

Query: 1   KMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXHHAFLASEAVIKQIP 180
           KMKVCMLGDAQHVEEAEKIGLDYMDVE                  +HAFLASEA+IKQIP
Sbjct: 61  KMKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 181 RLLGPGLNKAGKFPTLVT 234
           RLLGPGLNKAGKFPTLVT
Sbjct: 121 RLLGPGLNKAGKFPTLVT 138


>ref|NP_001236946.1| uncharacterized protein LOC100305550 [Glycine max]
           gi|255625879|gb|ACU13284.1| unknown [Glycine max]
          Length = 216

 Score =  114 bits (286), Expect = 6e-24
 Identities = 58/78 (74%), Positives = 60/78 (76%)
 Frame = +1

Query: 1   KMKVCMLGDAQHVEEAEKIGLDYMDVEGXXXXXXXXXXXXXXXXXHHAFLASEAVIKQIP 180
           KMK+CMLGDAQHVEEAEKIGLDYMDVE                  +HAFLASEAVIKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKIGLDYMDVEALKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 181 RLLGPGLNKAGKFPTLVT 234
           RLLGPGLNKAGKFPTLVT
Sbjct: 121 RLLGPGLNKAGKFPTLVT 138


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