BLASTX nr result

ID: Coptis21_contig00010102 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010102
         (1540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267504.2| PREDICTED: uncharacterized protein LOC100257...   319   1e-84
ref|XP_002515069.1| RNA-binding region-containing protein, putat...   295   3e-77
gb|ABK93394.1| unknown [Populus trichocarpa]                          286   1e-74
ref|XP_004140591.1| PREDICTED: uncharacterized protein LOC101210...   278   2e-72
ref|XP_003529876.1| PREDICTED: uncharacterized protein LOC100786...   278   3e-72

>ref|XP_002267504.2| PREDICTED: uncharacterized protein LOC100257521 [Vitis vinifera]
           gi|296089004|emb|CBI38707.3| unnamed protein product
           [Vitis vinifera]
          Length = 267

 Score =  319 bits (818), Expect = 1e-84
 Identities = 170/262 (64%), Positives = 195/262 (74%), Gaps = 8/262 (3%)
 Frame = +3

Query: 132 DTTYTKIFVGGLAWETQRETMRRYFEQFGDIQEAVVITDKNTGRSKGYGFVTFKDPDAAT 311
           DTTYTKIFVGGLAWETQR+TMRRYFEQFG+IQEAVVITDKNTGRSKGYGFVTFKDPDAA 
Sbjct: 12  DTTYTKIFVGGLAWETQRDTMRRYFEQFGEIQEAVVITDKNTGRSKGYGFVTFKDPDAAM 71

Query: 312 RACYDPSPVIDGRRANCNLASFGAQRTRPSTPQQHGMGRHRAAAPGFVAPPSYQGSTSSA 491
           RAC +PSPVIDGRRANCNLAS GA +TRP TP QHG GR R  APG VAPP+Y GS+S+ 
Sbjct: 72  RACQNPSPVIDGRRANCNLASLGAHKTRPPTP-QHGAGRFR-PAPGLVAPPAYHGSSSTY 129

Query: 492 YFHXXXXXXXXXXXXXXXXXXXDNMYPMNYYNVYGGQQFSPYFXXXXXXXPHGVYPSVYP 671
           +                     D+MYPMN+Y+VYGGQQFSPY+       P G++ + YP
Sbjct: 130 FHQPTSQYAFPYSTYGYTGYSQDSMYPMNFYSVYGGQQFSPYYTTGATGPP-GIFHNFYP 188

Query: 672 FYAQYGQSSQTQVYGIQYPQMVQYPYLPPAHYSTTGILSLP--------TSGVTASAGVT 827
           +YAQY QSSQ   +G+QYPQ++QYPYL P HYS+ GILSLP        T+GVTA+AG  
Sbjct: 189 YYAQYAQSSQGNGFGVQYPQVMQYPYL-PQHYSSAGILSLPPVAGAATSTAGVTATAG-A 246

Query: 828 AGTGSRSNSQTAAGTTTEHSPS 893
           AGTG+ S SQT AGTT+E   S
Sbjct: 247 AGTGA-SASQT-AGTTSEQDSS 266


>ref|XP_002515069.1| RNA-binding region-containing protein, putative [Ricinus communis]
           gi|223545549|gb|EEF47053.1| RNA-binding
           region-containing protein, putative [Ricinus communis]
          Length = 291

 Score =  295 bits (754), Expect = 3e-77
 Identities = 154/249 (61%), Positives = 174/249 (69%)
 Frame = +3

Query: 132 DTTYTKIFVGGLAWETQRETMRRYFEQFGDIQEAVVITDKNTGRSKGYGFVTFKDPDAAT 311
           DTT+TKIFVGGLAWETQR+TMRRYFEQFG+I EAVVITDKNTGRSKGYGFVTFKDP+AA 
Sbjct: 20  DTTFTKIFVGGLAWETQRDTMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPEAAI 79

Query: 312 RACYDPSPVIDGRRANCNLASFGAQRTRPSTPQQHGMGRHRAAAPGFVAPPSYQGSTSSA 491
           RAC +PSPVIDGRRANCNLAS GA +TR  TP QHG GR R  APG VAPP+Y GS+SS 
Sbjct: 80  RACQNPSPVIDGRRANCNLASLGAHKTRSPTP-QHGGGRFR-PAPGVVAPPAYHGSSSSY 137

Query: 492 YFHXXXXXXXXXXXXXXXXXXXDNMYPMNYYNVYGGQQFSPYFXXXXXXXPHGVYPSVYP 671
                                 D +YP+NYY VYGGQQFSPY+       P G++ + YP
Sbjct: 138 VHQPTGQYTFPYSAYGYSGYSQDTIYPLNYYGVYGGQQFSPYYSAGASGTP-GMFHNYYP 196

Query: 672 FYAQYGQSSQTQVYGIQYPQMVQYPYLPPAHYSTTGILSLPTSGVTASAGVTAGTGSRSN 851
           FY QY QSSQ   YG+QYPQMVQYP L P +Y +TGIL LP+S    +    A T + S 
Sbjct: 197 FYTQYAQSSQAHGYGVQYPQMVQYPCL-PQNYGSTGILQLPSSMAMTTTTTGATTMTASP 255

Query: 852 SQTAAGTTT 878
             T A TTT
Sbjct: 256 ITTTAATTT 264


>gb|ABK93394.1| unknown [Populus trichocarpa]
          Length = 294

 Score =  286 bits (731), Expect = 1e-74
 Identities = 147/250 (58%), Positives = 171/250 (68%), Gaps = 1/250 (0%)
 Frame = +3

Query: 132 DTTYTKIFVGGLAWETQRETMRRYFEQFGDIQEAVVITDKNTGRSKGYGFVTFKDPDAAT 311
           DTTYTKIFVGGLAWETQR+ MRRYFEQFG+I EAVVITDKNTGRSKGYGFVTFKDP+AA 
Sbjct: 21  DTTYTKIFVGGLAWETQRDAMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPEAAV 80

Query: 312 RACYDPSPVIDGRRANCNLASFGAQRTRPSTPQQHGMGRHRAAAPGFVAPPSYQGSTSSA 491
           RAC +PSPVIDGRRANCNLAS G Q+ RP TP QHG GR R    G VAPP++ GS++  
Sbjct: 81  RACQNPSPVIDGRRANCNLASLGGQKNRPPTP-QHGTGRFR-PVHGLVAPPTFPGSSAPY 138

Query: 492 YFHXXXXXXXXXXXXXXXXXXXDNMYPMNYYNVYGGQQFSPYFXXXXXXXPHGVYP-SVY 668
            +                    D MYP++YY VYGGQQFSPY+         G++P ++Y
Sbjct: 139 IYQPSGQYSFPYSAYGYAGYSQDAMYPLSYYGVYGGQQFSPYYSTGGASGTPGMFPHNLY 198

Query: 669 PFYAQYGQSSQTQVYGIQYPQMVQYPYLPPAHYSTTGILSLPTSGVTASAGVTAGTGSRS 848
           PFY QY QSSQ   +GIQYPQMVQYPY P  H  +TG LSLP+S   A+    A T + +
Sbjct: 199 PFYTQYAQSSQAHGFGIQYPQMVQYPYSPQQH-GSTGTLSLPSSIAMATTTAGAATMTMT 257

Query: 849 NSQTAAGTTT 878
            + TA    T
Sbjct: 258 TTATAVAAPT 267


>ref|XP_004140591.1| PREDICTED: uncharacterized protein LOC101210354 [Cucumis sativus]
           gi|449487325|ref|XP_004157571.1| PREDICTED:
           uncharacterized LOC101210354 [Cucumis sativus]
          Length = 286

 Score =  278 bits (712), Expect = 2e-72
 Identities = 146/253 (57%), Positives = 168/253 (66%), Gaps = 8/253 (3%)
 Frame = +3

Query: 132 DTTYTKIFVGGLAWETQRETMRRYFEQFGDIQEAVVITDKNTGRSKGYGFVTFKDPDAAT 311
           DTT+TKIFVGGLAWETQR TMRRYFEQFG+I EAVVITDKNTGRSKGYGFVTFKDPDAA 
Sbjct: 27  DTTFTKIFVGGLAWETQRHTMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPDAAI 86

Query: 312 RACYDPSPVIDGRRANCNLASFGAQRTRPSTPQQHGMGRHRAAAPGFVAPPSYQGSTSSA 491
           RAC +PSPVIDGRRANCNLAS GA +  P TP QHG+G     A G V PP+Y  S+SS 
Sbjct: 87  RACQNPSPVIDGRRANCNLASLGAHKPHPPTP-QHGVGGRFRGASGIVTPPAYHVSSSSY 145

Query: 492 YFHXXXXXXXXXXXXXXXXXXXDNMYPMNYYNVYGGQQFSPYFXXXXXXXPHGVYPSVYP 671
                                 D +YP+NYY VYGGQQFSPY+       P G++ ++YP
Sbjct: 146 IHQPTSQYSFPLSGYGFAGYSQDRIYPLNYYGVYGGQQFSPYYSANGLSGPAGMFQNLYP 205

Query: 672 FYAQYGQSSQTQVYGIQYPQMVQYPYLPPAHYSTTGILSLP--------TSGVTASAGVT 827
           +YA   QSSQ   +G+QYP ++QYPYLP  H S+TGILSLP        TSG TA+    
Sbjct: 206 YYA---QSSQGYGFGMQYPHLMQYPYLPQQH-SSTGILSLPGSNALGTTTSGTTATTITA 261

Query: 828 AGTGSRSNSQTAA 866
            G+G    S   A
Sbjct: 262 VGSGPSQASPAVA 274


>ref|XP_003529876.1| PREDICTED: uncharacterized protein LOC100786208 [Glycine max]
          Length = 296

 Score =  278 bits (711), Expect = 3e-72
 Identities = 149/261 (57%), Positives = 175/261 (67%), Gaps = 9/261 (3%)
 Frame = +3

Query: 132 DTTYTKIFVGGLAWETQRETMRRYFEQFGDIQEAVVITDKNTGRSKGYGFVTFKDPDAAT 311
           DTT+TKIFVGGLAWETQR+TMRRYFEQFG+I EAVVITDKNTGRSKGYGFVTFKDP++A 
Sbjct: 20  DTTFTKIFVGGLAWETQRDTMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPESAM 79

Query: 312 RACYDPSPVIDGRRANCNLASFGAQRTRPSTPQQHGMGRHRAAAPGFVA-PPSYQGSTSS 488
           RAC +PSPVIDGRRANCNLAS GA + RP T  QHG GR R   PG VA PP+Y GS+S+
Sbjct: 80  RACQNPSPVIDGRRANCNLASLGASKNRPPT-FQHGAGRFR-PPPGLVASPPAYHGSSST 137

Query: 489 AYFHXXXXXXXXXXXXXXXXXXXDNMYPMNYYNVYGGQQFSPYFXXXXXXXPHGVYPSVY 668
            +                     D +YP +YYNVYG QQFSPY+         G+  ++Y
Sbjct: 138 FFHQPPRQYTFPYSAYRYSGYSQDTLYPTSYYNVYGVQQFSPYYPSAGASGEVGLIHNIY 197

Query: 669 PFYAQYGQSSQTQVYGIQYPQMVQYPYLPPAHYSTTGILSLP-------TSGVTASA-GV 824
           PFY QY QS Q   +G+QYPQM Q+P+LP  + S+TGILS P       TS VT  A   
Sbjct: 198 PFYGQYAQSIQAPGFGVQYPQMAQFPFLPQHYGSSTGILSYPSSVTVPTTSAVTGIATTT 257

Query: 825 TAGTGSRSNSQTAAGTTTEHS 887
           T  T S S + T  GTT++ S
Sbjct: 258 TTTTTSASVAATVVGTTSQAS 278


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