BLASTX nr result

ID: Coptis21_contig00010091 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010091
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002864012.1| hypothetical protein ARALYDRAFT_495031 [Arab...    44   3e-07

>ref|XP_002864012.1| hypothetical protein ARALYDRAFT_495031 [Arabidopsis lyrata subsp.
           lyrata] gi|297309847|gb|EFH40271.1| hypothetical protein
           ARALYDRAFT_495031 [Arabidopsis lyrata subsp. lyrata]
          Length = 228

 Score = 44.3 bits (103), Expect(2) = 3e-07
 Identities = 23/43 (53%), Positives = 30/43 (69%)
 Frame = +3

Query: 12  MEAEVKVSENRIMKYSERDELRLKRKTLQSVLDQCQRALELIN 140
           M+ + K    RI K    D +R+KRKTLQ++LD CQRALEL+N
Sbjct: 1   MDIDSKNKGKRIYK----DNIRVKRKTLQALLDDCQRALELLN 39



 Score = 35.0 bits (79), Expect(2) = 3e-07
 Identities = 19/34 (55%), Positives = 23/34 (67%)
 Frame = +2

Query: 260 QEAELDDGSADSETTELCDILKSRVESPDFLEKL 361
           QE E + G  D E  EL D++KSRVE  DFLEK+
Sbjct: 59  QEEESNRG--DPEADELYDLIKSRVECDDFLEKI 90


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