BLASTX nr result

ID: Coptis21_contig00010090 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010090
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321554.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
emb|CAN77682.1| hypothetical protein VITISV_040764 [Vitis vinifera]    56   6e-06
gb|AAX95767.2| hypothetical protein LES1_20t00018 [Solanum lycop...    55   1e-05

>ref|XP_002321554.1| predicted protein [Populus trichocarpa] gi|222868550|gb|EEF05681.1|
           predicted protein [Populus trichocarpa]
          Length = 145

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 45/120 (37%), Positives = 62/120 (51%), Gaps = 2/120 (1%)
 Frame = +3

Query: 33  KRKNKKSLCEKTMKIVVNIMKISSLSLAQMSLGSTAAPQTITYENSSSGA--FAEITRIT 206
           K  N  SLCEK+MK+VVNI+K+SS S+A+MSLG+ + P         +G+   A+   ++
Sbjct: 4   KHGNDNSLCEKSMKMVVNIIKLSSFSIAKMSLGTPSPPVATKSLAHVTGSVVVAKEPLLS 63

Query: 207 QDSGQLRLQEPAXXXXXXXXXXXXXXXXKASSYVIREVKDINGAASDYILKFHDNNRKHA 386
           Q  G  R QEP                  +S  +  +   ING ASDYI K H+ NR  A
Sbjct: 64  QIPGSRRSQEPQGSSKPKSFVMQPDEGNGSSHVIHEDNSVINGRASDYIRKVHEKNRNDA 123


>emb|CAN77682.1| hypothetical protein VITISV_040764 [Vitis vinifera]
          Length = 134

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 36/106 (33%), Positives = 53/106 (50%)
 Frame = +3

Query: 48  KSLCEKTMKIVVNIMKISSLSLAQMSLGSTAAPQTITYENSSSGAFAEITRITQDSGQLR 227
           +SLCEK++ +  N++K+SS S+A+MSLG    P +    ++SS A   +T      G+  
Sbjct: 11  QSLCEKSILVAANMIKLSSFSIAKMSLGIGGTPAS-PRNSASSTAPNTVTNDHLHXGRSS 69

Query: 228 LQEPAXXXXXXXXXXXXXXXXKASSYVIREVKDINGAASDYILKFH 365
                                  SSYVI+E K ++G ASDYI K H
Sbjct: 70  RSXVPERSSKPITYLIEPNEGAGSSYVIQEEKGVDGKASDYIRKIH 115


>gb|AAX95767.2| hypothetical protein LES1_20t00018 [Solanum lycopersicum]
          Length = 119

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 40/123 (32%), Positives = 60/123 (48%)
 Frame = +3

Query: 24  VKMKRKNKKSLCEKTMKIVVNIMKISSLSLAQMSLGSTAAPQTITYENSSSGAFAEITRI 203
           +K K ++  SLCEK+MK+V N++++SS S+A+MSLG    P            F + +  
Sbjct: 1   MKNKSRSNDSLCEKSMKMVTNVIRLSSFSIARMSLGIATEPSP---GGKIPATFIKGSPT 57

Query: 204 TQDSGQLRLQEPAXXXXXXXXXXXXXXXXKASSYVIREVKDINGAASDYILKFHDNNRKH 383
            Q    LR Q+P                 K  +Y+I   ++    ASDYI + H+ NR H
Sbjct: 58  AQFPESLRSQKPV-------------NVKKPVAYLIEPTEN----ASDYIRRVHEKNR-H 99

Query: 384 ASN 392
            SN
Sbjct: 100 DSN 102


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