BLASTX nr result

ID: Coptis21_contig00010088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010088
         (695 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21836.3| unnamed protein product [Vitis vinifera]               69   9e-10
ref|XP_002273773.1| PREDICTED: ankyrin repeat-containing protein...    69   9e-10
emb|CBI28764.3| unnamed protein product [Vitis vinifera]               56   6e-06
ref|XP_002267032.1| PREDICTED: ankyrin repeat-containing protein...    56   6e-06

>emb|CBI21836.3| unnamed protein product [Vitis vinifera]
          Length = 671

 Score = 68.9 bits (167), Expect = 9e-10
 Identities = 40/134 (29%), Positives = 67/134 (50%)
 Frame = -2

Query: 643 VDWYKDRANXXXXXXXXXXXXXXXXXXXMPGGYQSDGSRQGMPTLVNHQKFEEFVWWDAM 464
           +D Y+DR N                   +PGGY +    QGM T++ H+KF+ F++ D +
Sbjct: 484 MDIYRDRVNTLLLVATLVATVSFAAGFTVPGGYNNSEPDQGMATMLRHKKFQVFIFCDMI 543

Query: 463 ALFFSMVAVIFLVWVQFVHHLPPTFLLLHCSQVLTVLALECMALAFVSGLSLTLVENSSL 284
           A++ S++  I L+W Q    L      L  +  L  ++L  M+LAF++G+SL +   + L
Sbjct: 544 AMYSSIIVAISLIWAQLC-DLRLVLTALRVALPLLGVSLATMSLAFMAGVSLVVSNLNWL 602

Query: 283 SQNMSRLGYTFYFI 242
           S  +   G+ F  I
Sbjct: 603 SNTVLITGFLFLII 616


>ref|XP_002273773.1| PREDICTED: ankyrin repeat-containing protein At3g12360-like [Vitis
           vinifera]
          Length = 666

 Score = 68.9 bits (167), Expect = 9e-10
 Identities = 40/134 (29%), Positives = 67/134 (50%)
 Frame = -2

Query: 643 VDWYKDRANXXXXXXXXXXXXXXXXXXXMPGGYQSDGSRQGMPTLVNHQKFEEFVWWDAM 464
           +D Y+DR N                   +PGGY +    QGM T++ H+KF+ F++ D +
Sbjct: 484 MDIYRDRVNTLLLVATLVATVSFAAGFTVPGGYNNSEPDQGMATMLRHKKFQVFIFCDMI 543

Query: 463 ALFFSMVAVIFLVWVQFVHHLPPTFLLLHCSQVLTVLALECMALAFVSGLSLTLVENSSL 284
           A++ S++  I L+W Q    L      L  +  L  ++L  M+LAF++G+SL +   + L
Sbjct: 544 AMYSSIIVAISLIWAQLC-DLRLVLTALRVALPLLGVSLATMSLAFMAGVSLVVSNLNWL 602

Query: 283 SQNMSRLGYTFYFI 242
           S  +   G+ F  I
Sbjct: 603 SNTVLITGFLFLII 616


>emb|CBI28764.3| unnamed protein product [Vitis vinifera]
          Length = 536

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 33/114 (28%), Positives = 62/114 (54%)
 Frame = -2

Query: 556 PGGYQSDGSRQGMPTLVNHQKFEEFVWWDAMALFFSMVAVIFLVWVQFVHHLPPTFLLLH 377
           PGGY +    QGM T++  +KF  F+  D +A++ S++  + L+W Q +  +    + L 
Sbjct: 356 PGGYNNSAPDQGMATMLPKEKFHAFLICDTIAMYSSIIVAVTLIWAQ-LGDISSVLVALK 414

Query: 376 CSQVLTVLALECMALAFVSGLSLTLVENSSLSQNMSRLGYTFYFIGLATVIQFL 215
            +  +  LAL  M++AF++G+ L + + S L   +  + + F    LAT++  L
Sbjct: 415 FALPVLGLALAMMSMAFMAGVCLVVSKLSWLVDIVMLMSFIF----LATLLTLL 464


>ref|XP_002267032.1| PREDICTED: ankyrin repeat-containing protein At5g02620-like [Vitis
           vinifera]
          Length = 585

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 33/114 (28%), Positives = 62/114 (54%)
 Frame = -2

Query: 556 PGGYQSDGSRQGMPTLVNHQKFEEFVWWDAMALFFSMVAVIFLVWVQFVHHLPPTFLLLH 377
           PGGY +    QGM T++  +KF  F+  D +A++ S++  + L+W Q +  +    + L 
Sbjct: 438 PGGYNNSAPDQGMATMLPKEKFHAFLICDTIAMYSSIIVAVTLIWAQ-LGDISSVLVALK 496

Query: 376 CSQVLTVLALECMALAFVSGLSLTLVENSSLSQNMSRLGYTFYFIGLATVIQFL 215
            +  +  LAL  M++AF++G+ L + + S L   +  + + F    LAT++  L
Sbjct: 497 FALPVLGLALAMMSMAFMAGVCLVVSKLSWLVDIVMLMSFIF----LATLLTLL 546


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