BLASTX nr result

ID: Coptis21_contig00010087 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010087
         (1908 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274072.1| PREDICTED: putative E3 ubiquitin-protein lig...   498   e-138
gb|ABG37641.1| auxin-regulated protein-like protein [Populus tri...   469   e-129
emb|CAN72662.1| hypothetical protein VITISV_013890 [Vitis vinifera]   382   e-103
ref|XP_002332748.1| predicted protein [Populus trichocarpa] gi|2...   375   e-101
emb|CBI23653.3| unnamed protein product [Vitis vinifera]              374   e-101

>ref|XP_002274072.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT35 [Vitis
            vinifera] gi|302143289|emb|CBI21850.3| unnamed protein
            product [Vitis vinifera]
          Length = 497

 Score =  498 bits (1283), Expect = e-138
 Identities = 273/552 (49%), Positives = 338/552 (61%), Gaps = 1/552 (0%)
 Frame = +1

Query: 133  MGLQQSKEALLYQQVIDGNIEGIKALHREGASLEWFDKEGKTALIVACTNPQLYDVAKTL 312
            MG +QSK+ LLYQ V  GNIE IKAL REGASLEWFD E KT LIVAC +  L  VA+TL
Sbjct: 8    MGGRQSKDELLYQHVATGNIEAIKALCREGASLEWFDSEAKTPLIVACMDSNLIMVAQTL 67

Query: 313  IQLGANVNAYRPGSHAGTALHHAVKKGLDQTVKLLLSHGANPLALNDDHKTPVELARVKG 492
            I LGANVNAYRPG  AGT LHHA K+GLDQTVKLLLS GAN L  NDD +T +++AR+ G
Sbjct: 68   IDLGANVNAYRPGREAGTPLHHAAKRGLDQTVKLLLSKGANALVRNDDGQTSLDVARING 127

Query: 493  HCNVVRTIESHICFFSGWLRELYGPGFMEVFAPHLLSKKIWVVVLPCGSRNXXXXXXXXX 672
            + NVVRTIE+HIC FSGWLREL+GPGF++  AP LLS+KIWVV++P G  N         
Sbjct: 128  YINVVRTIENHICLFSGWLRELHGPGFLKALAPQLLSRKIWVVIIPSGFNN---PSKPLR 184

Query: 673  XELAMYNSLQDARPRTTIALWKAKVEEPKFYQPVPVVNIFDKSTKKKFRLASSDEGERQQ 852
             EL +Y++ QDA+P T IAL    +EEPKF+Q  P + IFDKS K +++LAS++EG++QQ
Sbjct: 185  LELVIYSNFQDAQPCTVIALGNVNIEEPKFHQSDPALIIFDKSNKTRYKLASANEGDKQQ 244

Query: 853  LQWLSNACRGIPQVMHPPLLTNAHTSVEGPPPNGDDVELGMAVNASLLSAREEMPRIMDS 1032
            L+WL NACRGIPQV+  P+L +A  SV       +  EL MAV AS+ SA  + P ++ S
Sbjct: 245  LRWLYNACRGIPQVLPTPMLHDARPSVPASQTATEAAELAMAVGASIQSAAVDQPVLLSS 304

Query: 1033 -HSGPEVSNAIGWGSSADISSHNGWLXXXXXXXXXXXXXXWLDEPAEVAYNGWGTSETES 1209
               G E S+  GWG+  D +SH GW               W DE     +NG G  E+  
Sbjct: 305  TRLGSEASSTNGWGNPVDNTSHGGWSLDGTPTHSASSSSGWADESKRGEFNGLGVPESRL 364

Query: 1210 SSNRTQQNISAPGTTXXXXXXXXXXXXXXXXGPIGGSAFSSKESCGGWLNNQSENVQNGW 1389
              N+TQ N +                                       NN  + VQ   
Sbjct: 365  IRNQTQLNKTQ--------------------------------------NNIPQVVQT-- 384

Query: 1390 GVSETGSRSNQNNSASVPLTHATPQTASVPSAPPVPEGADDGPIQYPSIDFIPVDWTMPN 1569
                    SN N   + P           PSAPP+PE   +GP+ YP ID  PVD ++P 
Sbjct: 385  --------SNTNPVLASP----------APSAPPIPEALTEGPVYYPPIDLSPVDLSVPA 426

Query: 1570 MDNKDSRTSQAKEDGGASSSCVICLDAPVEGACVPCGHMAGCMSCLNGIKAKEWGCPVCR 1749
             +   + TS+ K D G SSSCVIC +AP+EGAC+PCGHMAGCM+CLN IKAK+  CPVCR
Sbjct: 427  AEYDAAGTSKTK-DKGDSSSCVICWEAPIEGACIPCGHMAGCMTCLNEIKAKKGVCPVCR 485

Query: 1750 AKIKQVIRLYAV 1785
            AKI+QVI+LYAV
Sbjct: 486  AKIQQVIKLYAV 497


>gb|ABG37641.1| auxin-regulated protein-like protein [Populus trichocarpa]
          Length = 499

 Score =  469 bits (1206), Expect = e-129
 Identities = 259/555 (46%), Positives = 333/555 (60%), Gaps = 4/555 (0%)
 Frame = +1

Query: 133  MGLQQSKEALLYQQVIDGNIEGIKALHREGASLEWFDKEGKTALIVACTNPQLYDVAKTL 312
            M  +QSK+ LLYQ  I GN++ +KAL  EGA LEW D++GKT LIVAC +  LY+VAK L
Sbjct: 8    MTQKQSKDELLYQLAIAGNVDAVKALCSEGAILEWIDRDGKTPLIVACMDSGLYNVAKVL 67

Query: 313  IQLGANVNAYRPGSHAGTALHHAVKKGLDQTVKLLLSHGANPLALNDDHKTPVELARVKG 492
            I++GANVNAYRPG HAGT LHHAVK+GL+QTVKLLLS GAN L  NDD +T +++AR+KG
Sbjct: 68   IEMGANVNAYRPGRHAGTPLHHAVKRGLEQTVKLLLSSGANALVRNDDCQTALDVARIKG 127

Query: 493  HCNVVRTIESHICFFSGWLRELYGPGFMEVFAPHLLSKKIWVVVLPCGSRNXXXXXXXXX 672
            + N+VRTIESHIC+F+GWLRE YGPGF+  FAP  LS+KIW  V+P GS N         
Sbjct: 128  NINIVRTIESHICYFTGWLREFYGPGFLRAFAPQFLSRKIWAAVIPQGSSN---PMTPKK 184

Query: 673  XELAMYNSLQDARPRTTIALWKAKVEEPKFYQPVPVVNIFDKSTKKKFRLASSDEGERQQ 852
             EL +Y S QD +PRT IALW A++EEP F +P P + IFD+STK +++LAS++EG++QQ
Sbjct: 185  LELVIYPSSQDVQPRTVIALWNAEIEEPNFNRPDPELTIFDQSTKTQYKLASANEGDKQQ 244

Query: 853  LQWLSNACRGIPQVMHPPLLTNAHTSVE--GPPPNGDDVELGMAV-NASLLSAREEMPRI 1023
            L WL +AC GIPQVM PP+  N  T+V   G   + + V   MA+   S+ S  E+ P  
Sbjct: 245  LHWLYDACSGIPQVMLPPMYGNPPTTVPVVGHHTSAEAVGSAMAIGGGSIQSTTEDNPLH 304

Query: 1024 MDSHSGPEVSNAIGWGSSADISSHNGWLXXXXXXXXXXXXXXWLDEPAEVAYNGWGTSET 1203
             ++H   EV NA GW       SHN W               W+ E  +  +NG      
Sbjct: 305  PNTHQSSEVINANGWEDPVRGDSHNRWGVTVASTHSEARSSGWMGEAPKEDHNGCAVPN- 363

Query: 1204 ESSSNRTQQNISAPGTTXXXXXXXXXXXXXXXXGPIGGSAFSSKESCGGWLNNQSENVQN 1383
                                             GP G                  ++VQ 
Sbjct: 364  --------------------------------MGPSG----------------SQDHVQT 375

Query: 1384 GWGVSETGSRSNQNNSASVPLTHATPQTASVPSAPPVP-EGADDGPIQYPSIDFIPVDWT 1560
             + +    S ++  N+ASVP         S PSAPP+P E  D GPI YPS DF  +D +
Sbjct: 376  RYDIPPV-SETSGGNTASVP---------SAPSAPPIPDEELDAGPIHYPSFDFSLLDLS 425

Query: 1561 MPNMDNKDSRTSQAKEDGGASSSCVICLDAPVEGACVPCGHMAGCMSCLNGIKAKEWGCP 1740
            +P ++   S TS   + GG SSSC+IC +APVEGAC+PCGHMAGCM+CL+ IKAK+  CP
Sbjct: 426  VPAIELGASVTSDVNK-GGTSSSCIICWEAPVEGACIPCGHMAGCMTCLSEIKAKKGVCP 484

Query: 1741 VCRAKIKQVIRLYAV 1785
            +CR+ I QV RLYAV
Sbjct: 485  ICRSNINQVTRLYAV 499


>emb|CAN72662.1| hypothetical protein VITISV_013890 [Vitis vinifera]
          Length = 500

 Score =  382 bits (982), Expect = e-103
 Identities = 197/349 (56%), Positives = 241/349 (69%), Gaps = 27/349 (7%)
 Frame = +1

Query: 133  MGLQQSKEALLYQQVIDGNIEGIKALHREGASLEWFDKEGKTALIVACTNPQLYDVAKTL 312
            MG QQSK+ LL+QQV+ GN+EGIKAL REGA LEW D+EGKT LIVAC   +L++VAKTL
Sbjct: 1    MGQQQSKDELLHQQVVYGNVEGIKALSREGAGLEWTDREGKTPLIVACMFSELFNVAKTL 60

Query: 313  IQLGANVNAYRPGSHAGTALHHAVKKGLDQTVKLLLSHGANPLALNDDHKTPVELARVKG 492
            I+LGANVNAYRPG HAGT LHHA KKGL++TV LLLSHGAN L +NDD +T +++AR KG
Sbjct: 61   IELGANVNAYRPGRHAGTPLHHAAKKGLEETVNLLLSHGANALVMNDDCQTALDVARAKG 120

Query: 493  HCNVVRTIESHICFFSGWLRELYGPGFMEVFAPHLLSKKIWVVVLPCGSRNXXXXXXXXX 672
            H  VVR IESHIC FSGWLRE YGPGF+EV AP  +S+K+WVV+LPCGSR          
Sbjct: 121  HSRVVRVIESHICLFSGWLREFYGPGFLEVLAPQWVSRKVWVVILPCGSRK---PTKPFK 177

Query: 673  XELAMYNSLQDARPRTTIALWKAKVEEPKFYQPVPVVNIFDKST---------------- 804
             ELA+Y+SLQDA+PRTTIALWKA ++E KF  P P V I D ST                
Sbjct: 178  LELAIYSSLQDAQPRTTIALWKANMDEAKFEDPDPAVIILDNSTISRGRRRRRCYTSREA 237

Query: 805  --------KKKFRLASSDEGERQQLQWLSNACRGIPQVMHPP-LLTNAHTSVEGP--PPN 951
                    + + +LA   + + QQLQW  NAC+GIPQ MHPP  L NA T    P  PP 
Sbjct: 238  RCKPRALRQTQIKLAPEKKSDSQQLQWFCNACKGIPQAMHPPAFLHNAQTPAVPPTAPPT 297

Query: 952  GDDVELGMAVNASLLSAREEMPRIMDSHSGPEVSNAIGWGSSADISSHN 1098
             +D+EL MA+NAS+ SA +E P ++DS S  E   +  W +S +I++HN
Sbjct: 298  AEDLELAMAINASIQSAMQEGPPLLDSPSSFENGASTSWNNSVNITNHN 346



 Score =  162 bits (410), Expect = 3e-37
 Identities = 81/134 (60%), Positives = 96/134 (71%), Gaps = 3/134 (2%)
 Frame = +1

Query: 1393 VSETGSRSNQNNSASVPLTHAT--PQTASVPSAPPVP-EGADDGPIQYPSIDFIPVDWTM 1563
            V E G  +N      +  TH    P  AS  SAPP+  E  DDGP+QYPSID  PVD T 
Sbjct: 369  VHEAGPSTNSTQHIQIE-THIPDIPVQASTASAPPIADEVVDDGPVQYPSIDSSPVDLTS 427

Query: 1564 PNMDNKDSRTSQAKEDGGASSSCVICLDAPVEGACVPCGHMAGCMSCLNGIKAKEWGCPV 1743
            P  +   + + Q+KE GGA+SSCVICLDAP+EGAC+PCGHMAGCMSCLN IKAK+WGCPV
Sbjct: 428  PAFETSAAASEQSKE-GGAASSCVICLDAPIEGACIPCGHMAGCMSCLNEIKAKKWGCPV 486

Query: 1744 CRAKIKQVIRLYAV 1785
            CRAKI QV++LY+V
Sbjct: 487  CRAKIDQVVKLYSV 500


>ref|XP_002332748.1| predicted protein [Populus trichocarpa] gi|222833076|gb|EEE71553.1|
            predicted protein [Populus trichocarpa]
          Length = 444

 Score =  375 bits (963), Expect = e-101
 Identities = 194/318 (61%), Positives = 236/318 (74%), Gaps = 3/318 (0%)
 Frame = +1

Query: 133  MGLQQSKEALLYQQVIDGNIEGIKALHREGASLEWFDKEGKTALIVACTNPQLYDVAKTL 312
            MG QQSK+ LLYQQV   NIEGIK L REGA LEW DKEGKT LIVAC NPQL++VAKTL
Sbjct: 1    MGQQQSKDELLYQQVNCSNIEGIKNLCREGARLEWIDKEGKTPLIVACLNPQLFNVAKTL 60

Query: 313  IQLGANVNAYRPGSHAGTALHHAVKKGLDQTVKLLLSHGANPLALNDDHKTPVELARVKG 492
            I+LGANVNAYRPG + G  LHHA K+GL+ TVKLLLSHGAN L +NDD +TP+E+AR KG
Sbjct: 61   IELGANVNAYRPGRNGGAPLHHAAKRGLENTVKLLLSHGANALMMNDDCQTPLEVARAKG 120

Query: 493  HCNVVRTIESHICFFSGWLRELYGPGFMEVFAPHLLSKKIWVVVLPCGSRNXXXXXXXXX 672
            + NVVR IESHIC FSGWLRE YGPGF+EV AP L+S+ IWVVVLP GSR+         
Sbjct: 121  YGNVVRAIESHICLFSGWLREFYGPGFLEVLAPRLVSRNIWVVVLPTGSRS---PRMPYK 177

Query: 673  XELAMYNSLQDARPRTTIALWKAKVEEPKFYQPVPVVNIFDKSTKKKFRLASSDEGERQQ 852
             ELA+Y+ LQDA+P T IALWKA +E+PKF+   P V I D STK + +LA ++E ++QQ
Sbjct: 178  LELAIYSRLQDAQPHTIIALWKANLEQPKFHHADPTVMIVDNSTKTRLKLAPANERDKQQ 237

Query: 853  LQWLSNACRGIPQVMHPP--LLTNAHTSVEG-PPPNGDDVELGMAVNASLLSAREEMPRI 1023
            LQW  +AC+GIPQVMHPP  L  + + +V+   PP+ +D E+ MA+NAS+ SA  E P I
Sbjct: 238  LQWFCDACKGIPQVMHPPEFLSKSQNLAVQATAPPSDEDPEIAMAINASIQSAMVEQP-I 296

Query: 1024 MDSHSGPEVSNAIGWGSS 1077
             D+HS    S++    SS
Sbjct: 297  SDTHSSTGASSSTSCVSS 314



 Score =  157 bits (396), Expect = 1e-35
 Identities = 81/132 (61%), Positives = 94/132 (71%), Gaps = 4/132 (3%)
 Frame = +1

Query: 1402 TGSRSNQN---NSASVPLTHATPQTASVPSAPP-VPEGADDGPIQYPSIDFIPVDWTMPN 1569
            +GS + Q    NS+   +  AT    SVPSAPP V E  +DGPI YPSID  P+D +   
Sbjct: 314  SGSSTQQTKILNSSVADVQTATDAQDSVPSAPPIVDELIEDGPIHYPSIDSSPLDISSLP 373

Query: 1570 MDNKDSRTSQAKEDGGASSSCVICLDAPVEGACVPCGHMAGCMSCLNGIKAKEWGCPVCR 1749
            ++N    T + KEDGG SSSCVICLDAPVEGAC+PCGHM GCMSCL  IKAK+WGCPVCR
Sbjct: 374  IENLPENTGEKKEDGG-SSSCVICLDAPVEGACIPCGHMVGCMSCLKEIKAKKWGCPVCR 432

Query: 1750 AKIKQVIRLYAV 1785
            A I QV+RLYAV
Sbjct: 433  ATINQVVRLYAV 444


>emb|CBI23653.3| unnamed protein product [Vitis vinifera]
          Length = 340

 Score =  374 bits (961), Expect = e-101
 Identities = 194/342 (56%), Positives = 235/342 (68%), Gaps = 27/342 (7%)
 Frame = +1

Query: 133  MGLQQSKEALLYQQVIDGNIEGIKALHREGASLEWFDKEGKTALIVACTNPQLYDVAKTL 312
            MG QQSK+ LL+QQV+ GN+EGIKAL REGA LEW D+EGKT LIVAC   +L++VAKTL
Sbjct: 1    MGQQQSKDELLHQQVVYGNVEGIKALSREGAGLEWTDREGKTPLIVACMFSELFNVAKTL 60

Query: 313  IQLGANVNAYRPGSHAGTALHHAVKKGLDQTVKLLLSHGANPLALNDDHKTPVELARVKG 492
            I+LGANVNAYRPG HAGT LHHA KKGL++TV LLLSHGAN L +NDD +T +++AR KG
Sbjct: 61   IELGANVNAYRPGRHAGTPLHHAAKKGLEETVNLLLSHGANALVMNDDCQTALDVARAKG 120

Query: 493  HCNVVRTIESHICFFSGWLRELYGPGFMEVFAPHLLSKKIWVVVLPCGSRNXXXXXXXXX 672
            H  VVR IESHIC FSGWLRE YGPGF+EV AP  +S+K+WVV+LPCGSR          
Sbjct: 121  HSRVVRVIESHICLFSGWLREFYGPGFLEVLAPQWVSRKVWVVILPCGSRK---PTKPFK 177

Query: 673  XELAMYNSLQDARPRTTIALWKAKVEEPKFYQPVPVVNIFDKST---------------- 804
             ELA+Y+SLQDA+PRTTIALWKA ++E KF  P P V I D ST                
Sbjct: 178  LELAIYSSLQDAQPRTTIALWKANMDEAKFEDPDPAVIILDNSTISRGRRRRRCYTSREA 237

Query: 805  --------KKKFRLASSDEGERQQLQWLSNACRGIPQVMHPP-LLTNAHTSVEGP--PPN 951
                    + + +LA   + + QQLQW  NAC+GIPQ MHPP  L NA T    P  PP 
Sbjct: 238  RCKPRALRQTQIKLAPEKKSDSQQLQWFCNACKGIPQAMHPPAFLHNAQTPAVPPTAPPT 297

Query: 952  GDDVELGMAVNASLLSAREEMPRIMDSHSGPEVSNAIGWGSS 1077
             +D+EL MA+NAS+ SA +E P ++DS S  E   +  W +S
Sbjct: 298  AEDLELAMAINASIQSAMQEGPPLLDSPSSFENGASTSWNNS 339