BLASTX nr result

ID: Coptis21_contig00010069 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010069
         (811 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26171.3| unnamed protein product [Vitis vinifera]              373   e-101
ref|XP_002277464.2| PREDICTED: uncharacterized protein LOC100252...   370   e-100
ref|XP_002524812.1| endo-1,3-1,4-beta-d-glucanase, putative [Ric...   368   e-100
emb|CBI32341.3| unnamed protein product [Vitis vinifera]              364   1e-98
emb|CAN80740.1| hypothetical protein VITISV_016685 [Vitis vinifera]   363   2e-98

>emb|CBI26171.3| unnamed protein product [Vitis vinifera]
          Length = 239

 Score =  373 bits (958), Expect = e-101
 Identities = 177/239 (74%), Positives = 201/239 (84%)
 Frame = +3

Query: 21  MSSSQCCENPPTLTPTSGVGHVEQIGGLSSYISASSHSKLGVLLVSDIFGYESPKLRKLA 200
           MS  QCCE+PP+L P SG GHVEQ+GGLS YI+ S HSKL +LLVSDI+GYE+P  RKLA
Sbjct: 1   MSGPQCCEHPPSLNPNSGSGHVEQLGGLSCYIAGSPHSKLAILLVSDIYGYEAPNFRKLA 60

Query: 201 DKIAAAGFYVVVPDFIHGDPYNPEIAERPLQVWIKTHGPDEGAEEAKPVIAALKSKGIST 380
           DK+AAAGFYVV PDF++GD Y P+ AERP  VWIK HG D+G E+ KPVI ALKSKG+S 
Sbjct: 61  DKVAAAGFYVVAPDFLYGDTYVPDKAERPFPVWIKDHGMDKGFEDTKPVIEALKSKGVSA 120

Query: 381 IGAAGFCWGAKVVIQLAKSDYIKAAVLCHPSFVTVDDFKDVKAPIAVLGAEIDQMSPPEL 560
           IGAAGFCWGAKVV++LAKS YI+AAVL HPSFV++DD K VK P AVLGAEIDQMSPP L
Sbjct: 121 IGAAGFCWGAKVVVELAKSGYIQAAVLLHPSFVSLDDIKGVKVPTAVLGAEIDQMSPPAL 180

Query: 561 VKQFGEVLSAQPEVDCFVKIFPGVAHGWTVRYKDEDEAAVKCAQEAHQDMLDWFTKYVK 737
           VKQF E+L+A+P VD FVKIFPGVAHGWTVRY  ED  AVKCA+EAHQDML WF+KYVK
Sbjct: 181 VKQFEEILTAKPGVDGFVKIFPGVAHGWTVRYNAEDAGAVKCAEEAHQDMLGWFSKYVK 239


>ref|XP_002277464.2| PREDICTED: uncharacterized protein LOC100252854 [Vitis vinifera]
          Length = 505

 Score =  370 bits (949), Expect = e-100
 Identities = 179/249 (71%), Positives = 204/249 (81%), Gaps = 4/249 (1%)
 Frame = +3

Query: 3    FIKKQDMSSSQCCENPPTLTPTSGVGHVEQIGGLSSYISASSHSKLGVLLVSDIFGYESP 182
            F  K+ MS  QCCE+PP+L P SG GHVEQ+GGLS YI+ S HSKL +LLVSDI+GYE+P
Sbjct: 257  FGSKKAMSGPQCCEHPPSLNPNSGSGHVEQLGGLSCYIAGSPHSKLAILLVSDIYGYEAP 316

Query: 183  KLRKLADKIAAAGFYVVVPDFIHGDPYNPEIAERPLQVWIKTHGPDEGAEEAKPVIAALK 362
              RKLADK+AAAGFYVV PDF++GD Y P+ AERP  VWIK HG D+G E+ KPVI ALK
Sbjct: 317  NFRKLADKVAAAGFYVVAPDFLYGDTYVPDKAERPFPVWIKDHGMDKGFEDTKPVIEALK 376

Query: 363  SKGISTIGAAGFCWG----AKVVIQLAKSDYIKAAVLCHPSFVTVDDFKDVKAPIAVLGA 530
            SKG+S IGAAGFCWG    AKVV++LAKS YI+AAVL HPSFV++DD K VK P AVLGA
Sbjct: 377  SKGVSAIGAAGFCWGGILAAKVVVELAKSGYIQAAVLLHPSFVSLDDIKGVKVPTAVLGA 436

Query: 531  EIDQMSPPELVKQFGEVLSAQPEVDCFVKIFPGVAHGWTVRYKDEDEAAVKCAQEAHQDM 710
            EIDQMSPP LVKQF E+L+A+P VD FVKIFPGVAHGWTVRY  ED  AVKCA+EAHQDM
Sbjct: 437  EIDQMSPPALVKQFEEILTAKPGVDGFVKIFPGVAHGWTVRYNAEDAGAVKCAEEAHQDM 496

Query: 711  LDWFTKYVK 737
            L WF+KYVK
Sbjct: 497  LGWFSKYVK 505



 Score =  311 bits (796), Expect = 1e-82
 Identities = 148/240 (61%), Positives = 183/240 (76%), Gaps = 3/240 (1%)
 Frame = +3

Query: 21  MSSSQCCENPPTLTPTSGVGHVEQIGG---LSSYISASSHSKLGVLLVSDIFGYESPKLR 191
           MS S+C ENPP+ +P SG G V+++GG   L +Y++    SKL +L VSD+FGYE+P LR
Sbjct: 1   MSISRCYENPPSFSPGSGAGTVQEVGGGGRLKAYVTGPLDSKLAILFVSDVFGYEAPNLR 60

Query: 192 KLADKIAAAGFYVVVPDFIHGDPYNPEIAERPLQVWIKTHGPDEGAEEAKPVIAALKSKG 371
           KLADK+AAAGF VV PDF +GDP +        QVWI  HG D+G E+AK VIAAL+SKG
Sbjct: 61  KLADKVAAAGFLVVAPDFFYGDPVDLSNPNFDRQVWIAAHGTDKGCEDAKAVIAALRSKG 120

Query: 372 ISTIGAAGFCWGAKVVIQLAKSDYIKAAVLCHPSFVTVDDFKDVKAPIAVLGAEIDQMSP 551
           +S IGAAGFCWG KVV+ LA SD+I+AAV+ HP  +T D+  +VK PIA+LGAEID  SP
Sbjct: 121 VSAIGAAGFCWGGKVVVNLASSDHIQAAVVLHPGRITDDEINEVKTPIAILGAEIDDASP 180

Query: 552 PELVKQFGEVLSAQPEVDCFVKIFPGVAHGWTVRYKDEDEAAVKCAQEAHQDMLDWFTKY 731
           PE ++ FGE+LSA+  +DCFVKIFPGVAHGWTVRY  EDE  VK A+EAH DML+WF+KY
Sbjct: 181 PEQLEHFGEILSAKSGIDCFVKIFPGVAHGWTVRYSVEDEWGVKSAEEAHGDMLNWFSKY 240


>ref|XP_002524812.1| endo-1,3-1,4-beta-d-glucanase, putative [Ricinus communis]
           gi|223535996|gb|EEF37655.1|
           endo-1,3-1,4-beta-d-glucanase, putative [Ricinus
           communis]
          Length = 239

 Score =  368 bits (945), Expect = e-100
 Identities = 171/239 (71%), Positives = 206/239 (86%)
 Frame = +3

Query: 21  MSSSQCCENPPTLTPTSGVGHVEQIGGLSSYISASSHSKLGVLLVSDIFGYESPKLRKLA 200
           MS SQCCENPPTL+  SG+G V +IGGL  Y +  S  K  ++L+SDIFG+E+P LRKLA
Sbjct: 1   MSGSQCCENPPTLSSGSGIGSVTEIGGLKVYATGPSDCKRSIVLISDIFGWEAPNLRKLA 60

Query: 201 DKIAAAGFYVVVPDFIHGDPYNPEIAERPLQVWIKTHGPDEGAEEAKPVIAALKSKGIST 380
           DK+AAAGFYVVVPDF +GDPY PE A+RPL +WIK+HG D+G E+AKP+IAALKSKG+S 
Sbjct: 61  DKVAAAGFYVVVPDFFYGDPYVPENADRPLPIWIKSHGTDKGFEDAKPIIAALKSKGVSA 120

Query: 381 IGAAGFCWGAKVVIQLAKSDYIKAAVLCHPSFVTVDDFKDVKAPIAVLGAEIDQMSPPEL 560
           IGAAGFCWGAKVV++LAKSD I+AAVL HPSFVTVDD K++K PIA+LGAEID +SPP L
Sbjct: 121 IGAAGFCWGAKVVVELAKSDPIQAAVLLHPSFVTVDDIKEIKEPIAILGAEIDHLSPPTL 180

Query: 561 VKQFGEVLSAQPEVDCFVKIFPGVAHGWTVRYKDEDEAAVKCAQEAHQDMLDWFTKYVK 737
           +KQF EVLSA+PE++ +VKIFPGVAHGWTVRYK EDE AV+CA+EAH+DMLDWF +YV+
Sbjct: 181 LKQFEEVLSARPEINGYVKIFPGVAHGWTVRYKTEDEKAVECAEEAHKDMLDWFAEYVQ 239


>emb|CBI32341.3| unnamed protein product [Vitis vinifera]
          Length = 257

 Score =  364 bits (934), Expect = 1e-98
 Identities = 172/243 (70%), Positives = 209/243 (86%)
 Frame = +3

Query: 9   KKQDMSSSQCCENPPTLTPTSGVGHVEQIGGLSSYISASSHSKLGVLLVSDIFGYESPKL 188
           ++ +MS SQCCENPP LT   G G V ++GGL +Y++  S SK  +LLVSDIFGYE+PK 
Sbjct: 15  EEDNMSDSQCCENPPNLTSICGGGSVIEVGGLKAYVAGPSDSKHAILLVSDIFGYEAPKF 74

Query: 189 RKLADKIAAAGFYVVVPDFIHGDPYNPEIAERPLQVWIKTHGPDEGAEEAKPVIAALKSK 368
           RKLADK+AAAGFYVVVPDF +GDP+  +I E+P++VW ++HG D+G E+AKPVIAALKSK
Sbjct: 75  RKLADKVAAAGFYVVVPDFFYGDPFVFDIPEKPIEVWRESHGTDKGFEDAKPVIAALKSK 134

Query: 369 GISTIGAAGFCWGAKVVIQLAKSDYIKAAVLCHPSFVTVDDFKDVKAPIAVLGAEIDQMS 548
           GISTIGAAGFCWGAKVV++LAKSDYI++AVL HPS VTVDD K+VKAPIAVLGAEID+ S
Sbjct: 135 GISTIGAAGFCWGAKVVVELAKSDYIQSAVLLHPSRVTVDDIKEVKAPIAVLGAEIDKAS 194

Query: 549 PPELVKQFGEVLSAQPEVDCFVKIFPGVAHGWTVRYKDEDEAAVKCAQEAHQDMLDWFTK 728
           PPEL+KQF EVLS +PEV+ +VKIFPGV HGW+VRYKDE+E  VK A+EAHQ+M+DWFT+
Sbjct: 195 PPELLKQFEEVLSTKPEVNSYVKIFPGVVHGWSVRYKDENEIEVKSAEEAHQNMVDWFTR 254

Query: 729 YVK 737
           YVK
Sbjct: 255 YVK 257


>emb|CAN80740.1| hypothetical protein VITISV_016685 [Vitis vinifera]
          Length = 251

 Score =  363 bits (932), Expect = 2e-98
 Identities = 177/251 (70%), Positives = 202/251 (80%), Gaps = 12/251 (4%)
 Frame = +3

Query: 21  MSSSQCCENPPTLTPTSGVGHVEQIGGLSSYISASSHSKLGVLLVSDIFGYESP------ 182
           MS  QCCE+PP+L P SG GHVEQ+GGLS YI+ S HSKL +LLVSDI+GY +       
Sbjct: 1   MSGPQCCEHPPSLNPNSGSGHVEQLGGLSCYIAGSPHSKLAILLVSDIYGYNTNCFSCMA 60

Query: 183 ------KLRKLADKIAAAGFYVVVPDFIHGDPYNPEIAERPLQVWIKTHGPDEGAEEAKP 344
                 K +KLADK+AAAGFYVV PDF++GDPY P+ AERPL VWIK HG D+G E+ KP
Sbjct: 61  SKPDIMKNKKLADKVAAAGFYVVAPDFLYGDPYVPDKAERPLPVWIKDHGMDKGFEDTKP 120

Query: 345 VIAALKSKGISTIGAAGFCWGAKVVIQLAKSDYIKAAVLCHPSFVTVDDFKDVKAPIAVL 524
           VI ALKSKG+S IGAAGFCWGAKVV++LAKS YI+AAVL HPSFV++DD K VK P AVL
Sbjct: 121 VIEALKSKGVSAIGAAGFCWGAKVVVELAKSGYIQAAVLLHPSFVSLDDIKGVKVPTAVL 180

Query: 525 GAEIDQMSPPELVKQFGEVLSAQPEVDCFVKIFPGVAHGWTVRYKDEDEAAVKCAQEAHQ 704
           GAEIDQMSPP LVKQF E+L+A+P VD FVKIFPGVAHGWTVRY  ED  AVKCA+EAHQ
Sbjct: 181 GAEIDQMSPPALVKQFEEILTAKPGVDGFVKIFPGVAHGWTVRYNAEDAGAVKCAEEAHQ 240

Query: 705 DMLDWFTKYVK 737
           DML WF+KYVK
Sbjct: 241 DMLGWFSKYVK 251


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