BLASTX nr result

ID: Coptis21_contig00010061 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010061
         (1141 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298280.1| predicted protein [Populus trichocarpa] gi|2...   221   3e-55
ref|XP_002523835.1| DNA binding protein, putative [Ricinus commu...   214   2e-53
ref|XP_002273261.1| PREDICTED: myb-like protein H [Vitis vinifera]    209   1e-51
emb|CBI28292.3| unnamed protein product [Vitis vinifera]              207   3e-51
ref|NP_001237103.1| syringolide-induced protein 1-3-1B [Glycine ...   207   5e-51

>ref|XP_002298280.1| predicted protein [Populus trichocarpa] gi|222845538|gb|EEE83085.1|
           predicted protein [Populus trichocarpa]
          Length = 223

 Score =  221 bits (562), Expect = 3e-55
 Identities = 121/213 (56%), Positives = 146/213 (68%), Gaps = 15/213 (7%)
 Frame = +3

Query: 159 MQDKQFEKTLVIFPEETPNRWENISSQVPGKTASEVEQHYRVLVDDINAIEAGLIEPPTY 338
           ++DKQFE+ LV+FPEETP RWE ISS VPGK+  EV +HY  LV D+  I++G +E P Y
Sbjct: 11  LEDKQFEQALVLFPEETPRRWEKISSYVPGKSWREVRKHYEDLVHDVLEIDSGRVEVPVY 70

Query: 339 TDDFVF-ENRDSLTAKTAKSND------SERRKGTPWTEDEHKLFLIGLQKYGKGDWRSI 497
             D ++ ++  SL    A+S        +ERRKGTPWTE+EH+LFLIGLQKYGKGDWRSI
Sbjct: 71  DQDELWGDSTTSLGGAAAESRSGKEREHTERRKGTPWTEEEHRLFLIGLQKYGKGDWRSI 130

Query: 498 SRNAVVSRTPTQVASHAQKYFNRVNSGTKEKKRSSIHDITVDEA--SLLQS------NIQ 653
           SRNAVVSRTPTQVASHAQKYF R+NS  KEKKRSSIHDIT   A  S+ Q+      N +
Sbjct: 131 SRNAVVSRTPTQVASHAQKYFLRLNSVKKEKKRSSIHDITATNATHSMAQTSHDPNWNFE 190

Query: 654 NSIVPVNNPSQQLQVPFPNHGAPAGYQGFGFHM 752
                V+ P  +    F + G P  YQGFGF M
Sbjct: 191 LMDQSVDEPLSRPANFFHDQGNPLAYQGFGFPM 223


>ref|XP_002523835.1| DNA binding protein, putative [Ricinus communis]
           gi|223536923|gb|EEF38561.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 214

 Score =  214 bits (546), Expect = 2e-53
 Identities = 111/205 (54%), Positives = 143/205 (69%), Gaps = 9/205 (4%)
 Frame = +3

Query: 159 MQDKQFEKTLVIFPEETPNRWENISSQVPGKTASEVEQHYRVLVDDINAIEAGLIEPPTY 338
           ++DK FE+ LV+FPEETP+RWE I+S VPGK+  +V++HY  LV D+  I++G +E P+Y
Sbjct: 13  LEDKLFERALVVFPEETPDRWEKIASHVPGKSRFDVKEHYEDLVYDVKEIDSGRVELPSY 72

Query: 339 TDDF-----VFENRDSLT---AKTAKSNDSERRKGTPWTEDEHKLFLIGLQKYGKGDWRS 494
            D F       E+  S     +K  +   SERRKG PWTE+EH+LFLIGLQ+YGKGDWRS
Sbjct: 73  GDQFGLGWGAAESGTSQVWFGSKGKEKETSERRKGVPWTEEEHRLFLIGLQRYGKGDWRS 132

Query: 495 ISRNAVVSRTPTQVASHAQKYFNRVNSGTKEKKRSSIHDITVDEASLLQSNIQNSIVPVN 674
           ISRNAVVSRTPTQVASHAQKYF R+NS  KEKKR SIHDIT    S+   +  ++     
Sbjct: 133 ISRNAVVSRTPTQVASHAQKYFLRLNSVKKEKKRPSIHDITTSANSVPPQSNDHNWADYM 192

Query: 675 NPSQQLQVPFPNHGAP-AGYQGFGF 746
           +P      P+P+HG+P + + GFGF
Sbjct: 193 DPK-----PYPDHGSPSSAFHGFGF 212


>ref|XP_002273261.1| PREDICTED: myb-like protein H [Vitis vinifera]
          Length = 224

 Score =  209 bits (532), Expect = 1e-51
 Identities = 112/206 (54%), Positives = 142/206 (68%), Gaps = 9/206 (4%)
 Frame = +3

Query: 162 QDKQFEKTLVIFPEETPNRWENISSQVPGKTASEVEQHYRVLVDDINAIEAGLIEPPTYT 341
           QDK FE+ LV+ PEETP+RW+ I++QVPGK++SEV +HY  LV D+  I++G +E P Y 
Sbjct: 27  QDKLFERALVVIPEETPDRWDKIAAQVPGKSSSEVRRHYEDLVHDVAEIDSGRVELPLYE 86

Query: 342 DDFVFEN--RDSLTAKTA-----KSNDSERRKGTPWTEDEHKLFLIGLQKYGKGDWRSIS 500
           D+        DS   + +     + ++SER+KG PWTE+EH+LFLIGLQ+YGKGDWRSIS
Sbjct: 87  DESCGSPWASDSRAGQVSFSPRPRQSESERKKGVPWTEEEHRLFLIGLQRYGKGDWRSIS 146

Query: 501 RNAVVSRTPTQVASHAQKYFNRVNSGTKEKKRSSIHDITVDEA--SLLQSNIQNSIVPVN 674
           RNAVVSRTPTQVASHAQKYF R+ SG K+KKRSSIHDIT  +   SL  SN Q  +    
Sbjct: 147 RNAVVSRTPTQVASHAQKYFMRLTSGKKDKKRSSIHDITTVDTSNSLPHSNTQTWV---- 202

Query: 675 NPSQQLQVPFPNHGAPAGYQGFGFHM 752
             S   Q+P+   G P+    FGF M
Sbjct: 203 GESLASQIPYYEEGPPS----FGFSM 224


>emb|CBI28292.3| unnamed protein product [Vitis vinifera]
          Length = 225

 Score =  207 bits (528), Expect = 3e-51
 Identities = 111/204 (54%), Positives = 141/204 (69%), Gaps = 9/204 (4%)
 Frame = +3

Query: 162 QDKQFEKTLVIFPEETPNRWENISSQVPGKTASEVEQHYRVLVDDINAIEAGLIEPPTYT 341
           QDK FE+ LV+ PEETP+RW+ I++QVPGK++SEV +HY  LV D+  I++G +E P Y 
Sbjct: 20  QDKLFERALVVIPEETPDRWDKIAAQVPGKSSSEVRRHYEDLVHDVAEIDSGRVELPLYE 79

Query: 342 DDFVFEN--RDSLTAKTA-----KSNDSERRKGTPWTEDEHKLFLIGLQKYGKGDWRSIS 500
           D+        DS   + +     + ++SER+KG PWTE+EH+LFLIGLQ+YGKGDWRSIS
Sbjct: 80  DESCGSPWASDSRAGQVSFSPRPRQSESERKKGVPWTEEEHRLFLIGLQRYGKGDWRSIS 139

Query: 501 RNAVVSRTPTQVASHAQKYFNRVNSGTKEKKRSSIHDITVDEA--SLLQSNIQNSIVPVN 674
           RNAVVSRTPTQVASHAQKYF R+ SG K+KKRSSIHDIT  +   SL  SN Q  +    
Sbjct: 140 RNAVVSRTPTQVASHAQKYFMRLTSGKKDKKRSSIHDITTVDTSNSLPHSNTQTWV---- 195

Query: 675 NPSQQLQVPFPNHGAPAGYQGFGF 746
             S   Q+P+   G P+    FGF
Sbjct: 196 GESLASQIPYYEEGPPS----FGF 215


>ref|NP_001237103.1| syringolide-induced protein 1-3-1B [Glycine max]
           gi|19911579|dbj|BAB86893.1| syringolide-induced protein
           1-3-1B [Glycine max]
          Length = 236

 Score =  207 bits (526), Expect = 5e-51
 Identities = 107/215 (49%), Positives = 139/215 (64%), Gaps = 19/215 (8%)
 Frame = +3

Query: 165 DKQFEKTLVIFPEETPNRWENISSQVPGKTASEVEQHYRVLVDDINAIEAGLIEPPTYTD 344
           DK FE+ L++ PE+ P+RWE I+ QVPGK+A EV +HY  LV D+  I++G +E P+Y D
Sbjct: 22  DKLFERALLVVPEDLPDRWEKIADQVPGKSAVEVREHYEALVHDVFEIDSGRVEVPSYVD 81

Query: 345 DFVFE--------------NRDSLTAKTAKSNDSERRKGTPWTEDEHKLFLIGLQKYGKG 482
           D V                N+ S  +K  +  D+ER+KGTPWTE+EH+LFLIGL K+GKG
Sbjct: 82  DSVATPPSGGAEISTWDNANQISFGSKPKQQGDNERKKGTPWTEEEHRLFLIGLSKFGKG 141

Query: 483 DWRSISRNAVVSRTPTQVASHAQKYFNRVNSGTKEKKRSSIHDITVDEASLLQSNIQNSI 662
           DWRSISRN VV+RTPTQVASHAQKYF R NS  KE+KRSSIHDIT  +++ +   I  + 
Sbjct: 142 DWRSISRNVVVTRTPTQVASHAQKYFLRQNSVKKERKRSSIHDITTVDSNSVPVPIDQNW 201

Query: 663 VPVNNPSQQLQVPFPNHG-----APAGYQGFGFHM 752
           VP    S Q  + +P+          GY  +GF M
Sbjct: 202 VPPPGGSVQQSLQYPSSNMLDQMGTFGYSNYGFGM 236


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