BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010058
         (1264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276763.1| PREDICTED: uncharacterized protein LOC100264...   308   1e-81
gb|AEG66932.1| plastid transcriptionally active [Gossypium hirsu...   296   1e-77
gb|AAF14021.1|AC011436_5 unknown protein [Arabidopsis thaliana]       280   6e-73
ref|NP_566346.1| plastid transcriptionally active 13 [Arabidopsi...   280   6e-73
gb|AAM65289.1| unknown [Arabidopsis thaliana]                         276   6e-72

>ref|XP_002276763.1| PREDICTED: uncharacterized protein LOC100264906 [Vitis vinifera]
            gi|297740266|emb|CBI30448.3| unnamed protein product
            [Vitis vinifera]
          Length = 339

 Score =  308 bits (790), Expect = 1e-81
 Identities = 157/275 (57%), Positives = 193/275 (70%), Gaps = 4/275 (1%)
 Frame = +3

Query: 303  NWXXXXXXXXXXXPTKRFANWKDELNLDNLADLGTQWWCVRVSRVNGHETADRLARFIAR 482
            NW           P KR+A+W +ELNLDNLA LG QWW VRVSRV+G E+A+RLAR +AR
Sbjct: 65   NWREEVEERLLKKPKKRYASWTEELNLDNLALLGPQWWVVRVSRVSGQESAERLARSLAR 124

Query: 483  NHPVVEFKVYAPAVHVKRKLKNGTISVKPKPVFPGCIFLSCVLNKELHDIIRECDGIGGF 662
            N P ++FKVY P+V VKRKLKNG+ISVKPKP+FPGC+FL CVLNKE HD IRECDGIGGF
Sbjct: 125  NFPDIDFKVYVPSVQVKRKLKNGSISVKPKPLFPGCVFLRCVLNKETHDFIRECDGIGGF 184

Query: 663  IGSKVGNTKKQINRPKPVSTEDIEAIFRQAKEEQEKADQAFDEEQRSEGILKNEEI---- 830
            +GSKVGNTK+QIN+P+PVS +DIEAIF+Q+KEEQEKAD+AF+EEQ+ E  +  E++    
Sbjct: 185  VGSKVGNTKRQINKPRPVSVDDIEAIFKQSKEEQEKADKAFEEEQQKEETINPEKLIIYP 244

Query: 831  NSDAIETVVNAVGNXXXXXXXXXXXXXXXXXXXXGADDKLLXXXXXXXXXXXXXXEFKGS 1010
            + D+ +  ++ V +                       DKLL              EF GS
Sbjct: 245  HLDSKDVTISVV-DSKPKRRSRKASKPIADGASTAKHDKLLKPGSTVRVVSGTFTEFSGS 303

Query: 1011 LKKLDPASGKATVGFTLFGKESFVDLDMNQIVAET 1115
            LKKLD  +GKATVGFTLFGKE+ VDLD+N+IVAET
Sbjct: 304  LKKLDRKNGKATVGFTLFGKETLVDLDVNEIVAET 338


>gb|AEG66932.1| plastid transcriptionally active [Gossypium hirsutum]
          Length = 345

 Score =  296 bits (757), Expect = 1e-77
 Identities = 160/315 (50%), Positives = 202/315 (64%), Gaps = 2/315 (0%)
 Frame = +3

Query: 177  PNKFTTSATLETSSGTEVTVGGELTAXXXXXXXXXXXVSKA-YNWXXXXXXXXXXXPTKR 353
            P     SA+L+ S+ T+V +  +L+A            SK+ Y+W           P KR
Sbjct: 32   PRLAPISASLD-STDTQVQLQQQLSARERRQLRNERRESKSGYSWREEVEERLIKKPKKR 90

Query: 354  FANWKDELNLDNLADLGTQWWCVRVSRVNGHETADRLARFIARNHPVVEFKVYAPAVHVK 533
            + +W +ELNLDNLA LG QWW VRVSR+ G ETA+  AR +ARN P +EFK+Y PAV  K
Sbjct: 91   YTSWTEELNLDNLAHLGPQWWVVRVSRLRGLETAEVTARVLARNFPNIEFKIYTPAVQEK 150

Query: 534  RKLKNGTISVKPKPVFPGCIFLSCVLNKELHDIIRECDGIGGFIGSKVGNTKKQINRPKP 713
            ++LKNG+ISVKPKP+FPGC+FL CVLNKE+HD IRECDG+GGF+GSKVGNTK+QIN+P+P
Sbjct: 151  KRLKNGSISVKPKPLFPGCVFLRCVLNKEIHDFIRECDGVGGFVGSKVGNTKRQINKPRP 210

Query: 714  VSTEDIEAIFRQAKEEQEKADQAFDEEQRSEGILKNEEINSDAIETVVNAVGNXXXXXXX 893
            VS +D+EAIFRQAK EQEKADQAF EEQ+ E  L ++++N +      N V +       
Sbjct: 211  VSVDDMEAIFRQAKVEQEKADQAFQEEQQGENALMSDKMNIE-YNVDSNGVTSSVLDTKP 269

Query: 894  XXXXXXXXXXXXXGAD-DKLLXXXXXXXXXXXXXXEFKGSLKKLDPASGKATVGFTLFGK 1070
                         GA   K L              EF GSLKKL+  +GKATVGFTLFGK
Sbjct: 270  KRQTKKKSDTVVNGAKYSKQLVPGSKVRVLSGNFAEFIGSLKKLNRKTGKATVGFTLFGK 329

Query: 1071 ESFVDLDMNQIVAET 1115
            E+ VDLD+  +V ET
Sbjct: 330  ETLVDLDVKDVVLET 344


>gb|AAF14021.1|AC011436_5 unknown protein [Arabidopsis thaliana]
          Length = 332

 Score =  280 bits (716), Expect = 6e-73
 Identities = 147/278 (52%), Positives = 181/278 (65%), Gaps = 7/278 (2%)
 Frame = +3

Query: 300  YNWXXXXXXXXXXXPTKRFANWKDELNLDNLADLGTQWWCVRVSRVNGHETADRLARFIA 479
            Y+W           P KR+A W +ELNLD LA+ G QWW VRVSR+ GHETA  LAR +A
Sbjct: 60   YSWREEVEEKLIKKPKKRYATWTEELNLDTLAESGPQWWAVRVSRLRGHETAQILARALA 119

Query: 480  RNHPVVEFKVYAPAVHVKRKLKNGTISVKPKPVFPGCIFLSCVLNKELHDIIRECDGIGG 659
            R  P +EF VYAP+V VKRKLKNG+ISVKPKPVFPGCIF+ C+LNKE+HD IR+ DG+GG
Sbjct: 120  RQFPEMEFTVYAPSVQVKRKLKNGSISVKPKPVFPGCIFIRCILNKEIHDSIRDVDGVGG 179

Query: 660  FIGSKVGNTKKQINRPKPVSTEDIEAIFRQAKEEQEKADQAFDEEQRSE---GILKNEEI 830
            FIGSKVGNTK+QIN+P+PV   D+EAIF+QAKE QEKAD  F+E  R+E    IL ++E+
Sbjct: 180  FIGSKVGNTKRQINKPRPVDDSDLEAIFKQAKEAQEKADSEFEEADRAEEEASILASQEL 239

Query: 831  ----NSDAIETVVNAVGNXXXXXXXXXXXXXXXXXXXXGADDKLLXXXXXXXXXXXXXXE 998
                NSD IETV  +                        A  K L              E
Sbjct: 240  LALSNSDVIETVAESKPKRAPRKATLATETK--------AKKKKLAAGSTVRVLSGTFAE 291

Query: 999  FKGSLKKLDPASGKATVGFTLFGKESFVDLDMNQIVAE 1112
            F G+LKKL+  + KATVGFTLFGKE+ V++D+N++V E
Sbjct: 292  FVGNLKKLNRKTAKATVGFTLFGKETLVEIDINELVPE 329


>ref|NP_566346.1| plastid transcriptionally active 13 [Arabidopsis thaliana]
            gi|15146210|gb|AAK83588.1| AT3g09210/F3L24_8 [Arabidopsis
            thaliana] gi|22136582|gb|AAM91077.1| AT3g09210/F3L24_8
            [Arabidopsis thaliana] gi|332641217|gb|AEE74738.1|
            plastid transcriptionally active 13 [Arabidopsis
            thaliana]
          Length = 333

 Score =  280 bits (716), Expect = 6e-73
 Identities = 147/278 (52%), Positives = 181/278 (65%), Gaps = 7/278 (2%)
 Frame = +3

Query: 300  YNWXXXXXXXXXXXPTKRFANWKDELNLDNLADLGTQWWCVRVSRVNGHETADRLARFIA 479
            Y+W           P KR+A W +ELNLD LA+ G QWW VRVSR+ GHETA  LAR +A
Sbjct: 61   YSWREEVEEKLIKKPKKRYATWTEELNLDTLAESGPQWWAVRVSRLRGHETAQILARALA 120

Query: 480  RNHPVVEFKVYAPAVHVKRKLKNGTISVKPKPVFPGCIFLSCVLNKELHDIIRECDGIGG 659
            R  P +EF VYAP+V VKRKLKNG+ISVKPKPVFPGCIF+ C+LNKE+HD IR+ DG+GG
Sbjct: 121  RQFPEMEFTVYAPSVQVKRKLKNGSISVKPKPVFPGCIFIRCILNKEIHDSIRDVDGVGG 180

Query: 660  FIGSKVGNTKKQINRPKPVSTEDIEAIFRQAKEEQEKADQAFDEEQRSE---GILKNEEI 830
            FIGSKVGNTK+QIN+P+PV   D+EAIF+QAKE QEKAD  F+E  R+E    IL ++E+
Sbjct: 181  FIGSKVGNTKRQINKPRPVDDSDLEAIFKQAKEAQEKADSEFEEADRAEEEASILASQEL 240

Query: 831  ----NSDAIETVVNAVGNXXXXXXXXXXXXXXXXXXXXGADDKLLXXXXXXXXXXXXXXE 998
                NSD IETV  +                        A  K L              E
Sbjct: 241  LALSNSDVIETVAESKPKRAPRKATLATETK--------AKKKKLAAGSTVRVLSGTFAE 292

Query: 999  FKGSLKKLDPASGKATVGFTLFGKESFVDLDMNQIVAE 1112
            F G+LKKL+  + KATVGFTLFGKE+ V++D+N++V E
Sbjct: 293  FVGNLKKLNRKTAKATVGFTLFGKETLVEIDINELVPE 330


>gb|AAM65289.1| unknown [Arabidopsis thaliana]
          Length = 333

 Score =  276 bits (707), Expect = 6e-72
 Identities = 146/278 (52%), Positives = 180/278 (64%), Gaps = 7/278 (2%)
 Frame = +3

Query: 300  YNWXXXXXXXXXXXPTKRFANWKDELNLDNLADLGTQWWCVRVSRVNGHETADRLARFIA 479
            Y+W           P KR+A W +ELNLD LA+ G QWW VRVSR+ GHETA  LAR +A
Sbjct: 61   YSWREEVEEKLIKKPKKRYATWTEELNLDTLAESGPQWWAVRVSRLRGHETAQILARALA 120

Query: 480  RNHPVVEFKVYAPAVHVKRKLKNGTISVKPKPVFPGCIFLSCVLNKELHDIIRECDGIGG 659
            R  P +EF VYAP+V VKRKLKNG+ISVKPKPVFPGCIF+ C+LNKE+HD IR+ DG+GG
Sbjct: 121  RQFPEMEFTVYAPSVQVKRKLKNGSISVKPKPVFPGCIFIRCILNKEIHDSIRDVDGVGG 180

Query: 660  FIGSKVGNTKKQINRPKPVSTEDIEAIFRQAKEEQEKADQAFDEEQRSE---GILKNEEI 830
            FI SKVGNTK+QIN+P+PV   D+EAIF+QAKE QEKAD  F+E  R+E    IL ++E+
Sbjct: 181  FIVSKVGNTKRQINKPRPVDDSDLEAIFKQAKEAQEKADSEFEEADRAEEEASILASQEL 240

Query: 831  ----NSDAIETVVNAVGNXXXXXXXXXXXXXXXXXXXXGADDKLLXXXXXXXXXXXXXXE 998
                NSD IETV  +                        A  K L              E
Sbjct: 241  LALSNSDVIETVAESKPKRAPRKATLATETK--------AKKKKLAAGSTVRVLSGTFAE 292

Query: 999  FKGSLKKLDPASGKATVGFTLFGKESFVDLDMNQIVAE 1112
            F G+LKKL+  + KATVGFTLFGKE+ V++D+N++V E
Sbjct: 293  FVGNLKKLNRKTAKATVGFTLFGKETLVEIDINELVPE 330