BLASTX nr result

ID: Coptis21_contig00010055 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010055
         (919 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    54   2e-06

>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 53.5 bits (127), Expect(2) = 2e-06
 Identities = 49/195 (25%), Positives = 78/195 (40%), Gaps = 12/195 (6%)
 Frame = -1

Query: 553 PQDCSWVWRNVLEERRTAMRFISYRIATDTSTSLW*E*DPWCHHSILIENQNAKDLLD-- 380
           PQ+CSW W  +L+ R  A   + Y I    +TSLW   D W  HS L ++   + + D  
Sbjct: 210 PQNCSWAWGKILKLRSLAWPKMKYIIGDGMTTSLW--FDNWHPHSPLADSYGERFIYDSG 267

Query: 379 LPLNSKVSELITDGTWNEK----------VHNLPHGESKTMILDTERKIV*LRIGSTGAP 230
           +  N+KV+ LI +  W             +  +P   +  M    + ++V L      +P
Sbjct: 268 MAKNAKVNVLIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKM--GQKDELVWL-----DSP 320

Query: 229 TXXXXXXXXXXXXXLDSQELKSGGAM*CGAKLVMPRHSFTCWQLFSSSLPTQDRLIQMKI 50
                            Q ++    +    K  +PRHSF  W      L TQD+L +  I
Sbjct: 321 NHRFSVKVAWEQLRRHRQMVEWHDIV--WFKNAVPRHSFLLWMAVQQKLTTQDKLHRFGI 378

Query: 49  LHSSTCCPCNDSREN 5
              + C  C  + E+
Sbjct: 379 HGPNRCSLCLRNNED 393



 Score = 25.0 bits (53), Expect(2) = 2e-06
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -3

Query: 617 SLWVDWVWKHHVKAGNFWTM 558
           S+W  W+  + ++  NFWT+
Sbjct: 188 SIWSTWIRSNLLRGRNFWTI 207


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