BLASTX nr result
ID: Coptis21_contig00010055
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00010055 (919 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2... 54 2e-06 >ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1| predicted protein [Populus trichocarpa] Length = 517 Score = 53.5 bits (127), Expect(2) = 2e-06 Identities = 49/195 (25%), Positives = 78/195 (40%), Gaps = 12/195 (6%) Frame = -1 Query: 553 PQDCSWVWRNVLEERRTAMRFISYRIATDTSTSLW*E*DPWCHHSILIENQNAKDLLD-- 380 PQ+CSW W +L+ R A + Y I +TSLW D W HS L ++ + + D Sbjct: 210 PQNCSWAWGKILKLRSLAWPKMKYIIGDGMTTSLW--FDNWHPHSPLADSYGERFIYDSG 267 Query: 379 LPLNSKVSELITDGTWNEK----------VHNLPHGESKTMILDTERKIV*LRIGSTGAP 230 + N+KV+ LI + W + +P + M + ++V L +P Sbjct: 268 MAKNAKVNVLIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKM--GQKDELVWL-----DSP 320 Query: 229 TXXXXXXXXXXXXXLDSQELKSGGAM*CGAKLVMPRHSFTCWQLFSSSLPTQDRLIQMKI 50 Q ++ + K +PRHSF W L TQD+L + I Sbjct: 321 NHRFSVKVAWEQLRRHRQMVEWHDIV--WFKNAVPRHSFLLWMAVQQKLTTQDKLHRFGI 378 Query: 49 LHSSTCCPCNDSREN 5 + C C + E+ Sbjct: 379 HGPNRCSLCLRNNED 393 Score = 25.0 bits (53), Expect(2) = 2e-06 Identities = 7/20 (35%), Positives = 13/20 (65%) Frame = -3 Query: 617 SLWVDWVWKHHVKAGNFWTM 558 S+W W+ + ++ NFWT+ Sbjct: 188 SIWSTWIRSNLLRGRNFWTI 207