BLASTX nr result

ID: Coptis21_contig00010053 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010053
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW84743.1| hypothetical protein ZEAMMB73_420463 [Zea mays]        132   4e-29
gb|AFW84742.1| hypothetical protein ZEAMMB73_420463 [Zea mays]        132   4e-29
ref|NP_001148468.1| LOC100282083 [Zea mays] gi|195619574|gb|ACG3...   132   4e-29
ref|XP_002520877.1| methionyl-tRNA synthetase, putative [Ricinus...   128   4e-28
ref|XP_002275301.2| PREDICTED: uncharacterized tRNA-binding prot...   128   4e-28

>gb|AFW84743.1| hypothetical protein ZEAMMB73_420463 [Zea mays]
          Length = 300

 Score =  132 bits (331), Expect = 4e-29
 Identities = 65/75 (86%), Positives = 69/75 (92%)
 Frame = -1

Query: 226 SLLNIQVGLIRKAWKHPSADSLLVEEIDLGDGGIRQVVSGLAKHCSPDALMNRRVALITN 47
           S+LNIQVGLIRKAWKHPSADSLLVEEIDLGDG +RQVVSGLAK+CSPD L NR V LITN
Sbjct: 189 SILNIQVGLIRKAWKHPSADSLLVEEIDLGDGNVRQVVSGLAKYCSPDDLTNRHVVLITN 248

Query: 46  VKPGKLRDVASSGLV 2
           VKPGKLRDV S+GLV
Sbjct: 249 VKPGKLRDVMSAGLV 263


>gb|AFW84742.1| hypothetical protein ZEAMMB73_420463 [Zea mays]
          Length = 324

 Score =  132 bits (331), Expect = 4e-29
 Identities = 65/75 (86%), Positives = 69/75 (92%)
 Frame = -1

Query: 226 SLLNIQVGLIRKAWKHPSADSLLVEEIDLGDGGIRQVVSGLAKHCSPDALMNRRVALITN 47
           S+LNIQVGLIRKAWKHPSADSLLVEEIDLGDG +RQVVSGLAK+CSPD L NR V LITN
Sbjct: 189 SILNIQVGLIRKAWKHPSADSLLVEEIDLGDGNVRQVVSGLAKYCSPDDLTNRHVVLITN 248

Query: 46  VKPGKLRDVASSGLV 2
           VKPGKLRDV S+GLV
Sbjct: 249 VKPGKLRDVMSAGLV 263


>ref|NP_001148468.1| LOC100282083 [Zea mays] gi|195619574|gb|ACG31617.1| methionyl-tRNA
           synthetase [Zea mays] gi|223942401|gb|ACN25284.1|
           unknown [Zea mays] gi|413952092|gb|AFW84741.1|
           methionyl-tRNA synthetase [Zea mays]
          Length = 348

 Score =  132 bits (331), Expect = 4e-29
 Identities = 65/75 (86%), Positives = 69/75 (92%)
 Frame = -1

Query: 226 SLLNIQVGLIRKAWKHPSADSLLVEEIDLGDGGIRQVVSGLAKHCSPDALMNRRVALITN 47
           S+LNIQVGLIRKAWKHPSADSLLVEEIDLGDG +RQVVSGLAK+CSPD L NR V LITN
Sbjct: 189 SILNIQVGLIRKAWKHPSADSLLVEEIDLGDGNVRQVVSGLAKYCSPDDLTNRHVVLITN 248

Query: 46  VKPGKLRDVASSGLV 2
           VKPGKLRDV S+GLV
Sbjct: 249 VKPGKLRDVMSAGLV 263


>ref|XP_002520877.1| methionyl-tRNA synthetase, putative [Ricinus communis]
           gi|223540008|gb|EEF41586.1| methionyl-tRNA synthetase,
           putative [Ricinus communis]
          Length = 391

 Score =  128 bits (322), Expect = 4e-28
 Identities = 64/75 (85%), Positives = 68/75 (90%)
 Frame = -1

Query: 226 SLLNIQVGLIRKAWKHPSADSLLVEEIDLGDGGIRQVVSGLAKHCSPDALMNRRVALITN 47
           SLLNIQVGLIRKAWKHPSADSLLVEEID+G+  +RQVVSGLAK C+PD LMNR V LITN
Sbjct: 232 SLLNIQVGLIRKAWKHPSADSLLVEEIDVGEAKLRQVVSGLAKFCTPDELMNRHVVLITN 291

Query: 46  VKPGKLRDVASSGLV 2
           VKPGKLRDVAS GLV
Sbjct: 292 VKPGKLRDVASEGLV 306


>ref|XP_002275301.2| PREDICTED: uncharacterized tRNA-binding protein C30C2.04-like
           [Vitis vinifera] gi|297736480|emb|CBI25351.3| unnamed
           protein product [Vitis vinifera]
          Length = 392

 Score =  128 bits (322), Expect = 4e-28
 Identities = 64/75 (85%), Positives = 68/75 (90%)
 Frame = -1

Query: 226 SLLNIQVGLIRKAWKHPSADSLLVEEIDLGDGGIRQVVSGLAKHCSPDALMNRRVALITN 47
           SLLNIQVGLIRKAWKHPSADSLLVEEID+GD  +RQVVSGLAK+CSP+ L NRRV LITN
Sbjct: 233 SLLNIQVGLIRKAWKHPSADSLLVEEIDVGDAKLRQVVSGLAKYCSPEELTNRRVVLITN 292

Query: 46  VKPGKLRDVASSGLV 2
           VKPGKLRDV S GLV
Sbjct: 293 VKPGKLRDVMSEGLV 307


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