BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010046
         (633 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    79   7e-13
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    78   1e-12
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    77   2e-12
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    70   3e-10
ref|XP_002306011.1| predicted protein [Populus trichocarpa] gi|2...    67   3e-09

>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 79.0 bits (193), Expect = 7e-13
 Identities = 40/83 (48%), Positives = 56/83 (67%), Gaps = 4/83 (4%)
 Frame = -2

Query: 623 TKRFIVAKLDFSGPYWVGVKDLGDCALFVGFNNSFSVVASDFPGCKQNCIYFSDDDMESF 444
           T RF V +LD++GP W+ +  LGD ALF+G N+S S+ A+DF GC  NCIY++DD +++ 
Sbjct: 292 TIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSGCMGNCIYYTDDYLDAN 351

Query: 443 FTG----HDKGIFDLEACTIEKI 387
           + G    HD GIF L   TIE +
Sbjct: 352 YDGHFGDHDLGIFKLCDETIEPL 374


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 43/86 (50%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
 Frame = -2

Query: 632 YRSTKRFIVAKLDFSGPYWVGVKDLGDCALFVGFNNSFSVVASDFPGCKQNCIYFSDDDM 453
           YR+T RF V +LD   P W  V  LGD ALF+G N S S+ + DFPGCK NCIY++DD  
Sbjct: 285 YRTT-RFQVCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYS 343

Query: 452 ESFFTG----HDKGIFDLEACTIEKI 387
           E  + G     D GIF+LE  +IE +
Sbjct: 344 EDNYDGIGGEQDLGIFNLEDGSIEPL 369


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 43/86 (50%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
 Frame = -2

Query: 632 YRSTKRFIVAKLDFSGPYWVGVKDLGDCALFVGFNNSFSVVASDFPGCKQNCIYFSDDDM 453
           YR+T RF V +LD   P W  V  LGD ALF+G N S S+ + DFPGCK NCIY++DD  
Sbjct: 285 YRTT-RFQVCRLDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYS 343

Query: 452 ESFFTG----HDKGIFDLEACTIEKI 387
           E  + G     D GIF+LE  +IE +
Sbjct: 344 EDNYDGIGGEQDLGIFNLEDGSIEPL 369


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 37/83 (44%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
 Frame = -2

Query: 623 TKRFIVAKLDFSGPYWVGVKDLGDCALFVGFNNSFSVVASDFPGCKQNCIYFSDDDMESF 444
           T RF V KLD +GP W  V  LGD  LF+G N+S ++ AS   GC  +CIY++DD   + 
Sbjct: 287 TARFEVFKLDLNGPRWERVTSLGDMMLFIGENSSLALSASGLSGCMGDCIYYTDDYSANN 346

Query: 443 FTG----HDKGIFDLEACTIEKI 387
           + G    HD GIF L   +IE +
Sbjct: 347 YDGHIGEHDLGIFKLSDGSIEPL 369


>ref|XP_002306011.1| predicted protein [Populus trichocarpa] gi|222848975|gb|EEE86522.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 33/88 (37%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
 Frame = -2

Query: 623 TKRFIVAKLDFSGPYWVGVKDLGDCALFVGFNNSFSVVASDFPGCKQNCIYFSDDDMES- 447
           T  F + ++DF    WV +  L D A+FVG N+S SV+  D PGC++N +YF+DD  E  
Sbjct: 359 TLLFGLFRMDFDKETWVSMTSLDDQAVFVGGNHSASVLTCDLPGCEKNSVYFTDDYWERM 418

Query: 446 ----FFTGHDKGIFDLEACTIEKICPID 375
                + GHD G+F+L+  +++    +D
Sbjct: 419 NEDYLYGGHDMGVFNLKDKSVKHFYQLD 446