BLASTX nr result

ID: Coptis21_contig00010040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010040
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325220.1| predicted protein [Populus trichocarpa] gi|2...   111   1e-22
ref|XP_002524507.1| hypothetical protein RCOM_0224470 [Ricinus c...   101   1e-19
ref|XP_004158814.1| PREDICTED: EPIDERMAL PATTERNING FACTOR-like ...    99   4e-19
ref|XP_004152199.1| PREDICTED: EPIDERMAL PATTERNING FACTOR-like ...    99   4e-19
ref|XP_003604388.1| EPIDERMAL PATTERNING FACTOR-like protein [Me...    97   2e-18

>ref|XP_002325220.1| predicted protein [Populus trichocarpa] gi|222866654|gb|EEF03785.1|
           predicted protein [Populus trichocarpa]
          Length = 109

 Score =  111 bits (277), Expect = 1e-22
 Identities = 54/111 (48%), Positives = 75/111 (67%), Gaps = 2/111 (1%)
 Frame = -3

Query: 499 MASPTNCSKGLSLA-VVILILSPTFLPSEQVLGLVSSSNNNDRALKQKKMMLGSRPPLCV 323
           MAS T+ S G+ +  +VIL  S TFLP    +  + S  + D  +KQKKM+LGSRPP CV
Sbjct: 1   MASATDSSYGIRITFIVILFFSLTFLPPVSAVSSMPSRGSED--MKQKKMVLGSRPPQCV 58

Query: 322 NKCFHCRPCKATLVIPPHRKRSSQ-VSFEKEDDTYYLLTWRCRCGNRIYQP 173
           N+C +C+PC A LV PPH K   +  S  K D++YYLL+W+C+CG++ +QP
Sbjct: 59  NRCSNCKPCMAALVTPPHHKNGVRGPSSSKGDESYYLLSWKCKCGDKYFQP 109


>ref|XP_002524507.1| hypothetical protein RCOM_0224470 [Ricinus communis]
           gi|223536295|gb|EEF37947.1| hypothetical protein
           RCOM_0224470 [Ricinus communis]
          Length = 108

 Score =  101 bits (251), Expect = 1e-19
 Identities = 50/112 (44%), Positives = 70/112 (62%), Gaps = 3/112 (2%)
 Frame = -3

Query: 499 MASPTNCSKGLSLAVVILILSPTFLP---SEQVLGLVSSSNNNDRALKQKKMMLGSRPPL 329
           MAS      GL+   +++++   FLP   S  VL + SS    D   KQ KM+LGSRPP 
Sbjct: 1   MASLAYYPNGLTRIPLVILMFIFFLPFFSSTSVLTVGSSPYLRDNDGKQMKMVLGSRPPQ 60

Query: 328 CVNKCFHCRPCKATLVIPPHRKRSSQVSFEKEDDTYYLLTWRCRCGNRIYQP 173
           C+N+C +CRPC A LV PPH K     S  + D++YYLL+W+C+CG++ +QP
Sbjct: 61  CINRCLNCRPCMAALVTPPHHK----TSLSRGDESYYLLSWKCKCGDKYFQP 108


>ref|XP_004158814.1| PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 6-like [Cucumis
           sativus]
          Length = 120

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 54/122 (44%), Positives = 74/122 (60%), Gaps = 13/122 (10%)
 Frame = -3

Query: 499 MASPTNCSKGLSLAVVILILSPTFLPSEQVLGLVSS---------SNNNDRALKQKKMML 347
           MA P + S  L LA+ +     +FLP   V GLV S         + N++    ++KM++
Sbjct: 1   MALPISLSTSLKLALTLAAFF-SFLPPTSV-GLVLSRSGRSELGKAENDEMKNLEEKMVI 58

Query: 346 GSRPPLCVNKCFHCRPCKATLVIPPHRKR----SSQVSFEKEDDTYYLLTWRCRCGNRIY 179
           GSRPP C NKC +CRPC A  V+P HR +     S  S  +E+D+YYLL+W+CRCGN+IY
Sbjct: 59  GSRPPGCQNKCMNCRPCMAAAVVPVHRMKGKAFQSFSSSREEEDSYYLLSWKCRCGNKIY 118

Query: 178 QP 173
           QP
Sbjct: 119 QP 120


>ref|XP_004152199.1| PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 8-like [Cucumis
           sativus] gi|449528391|ref|XP_004171188.1| PREDICTED:
           EPIDERMAL PATTERNING FACTOR-like protein 8-like [Cucumis
           sativus]
          Length = 106

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 48/112 (42%), Positives = 67/112 (59%), Gaps = 3/112 (2%)
 Frame = -3

Query: 499 MASPTNCSKGLSLAVVILILSPTFLPSEQVLGLVSSSNNNDRALKQKKMMLGSRPPLCVN 320
           MASPTN    L +AV   ++   FL    + G+    +       QK+ +LGS+PP CV 
Sbjct: 1   MASPTNNLLKLVVAVAFAVVFSLFLSLPTLSGVAEVES------LQKRTVLGSKPPRCVG 54

Query: 319 KCFHCRPCKATLVIPPHR---KRSSQVSFEKEDDTYYLLTWRCRCGNRIYQP 173
           KC +CRPC A LV+P HR   +    +   +EDD+YYLL W+C+CGN++YQP
Sbjct: 55  KCLNCRPCTAALVVPEHREGKRFEGNLDHREEDDSYYLLHWKCKCGNKLYQP 106


>ref|XP_003604388.1| EPIDERMAL PATTERNING FACTOR-like protein [Medicago truncatula]
           gi|355505443|gb|AES86585.1| EPIDERMAL PATTERNING
           FACTOR-like protein [Medicago truncatula]
          Length = 111

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 48/103 (46%), Positives = 68/103 (66%), Gaps = 3/103 (2%)
 Frame = -3

Query: 472 GLSLAVVILILSPTF---LPSEQVLGLVSSSNNNDRALKQKKMMLGSRPPLCVNKCFHCR 302
           GL LA +I +L   F   L S+    LV   N++   L+ +KM++GS+PP C+NKC +CR
Sbjct: 12  GLKLATIITVLFIFFFCMLFSKSGGSLVLERNDS---LQDRKMVIGSKPPACLNKCMNCR 68

Query: 301 PCKATLVIPPHRKRSSQVSFEKEDDTYYLLTWRCRCGNRIYQP 173
           PC ATLV+   RK    +S   ++DTYYLL W+CRCGN+++QP
Sbjct: 69  PCIATLVVSQKRKSYKVLSRGDDNDTYYLLAWKCRCGNKVFQP 111


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