BLASTX nr result

ID: Coptis21_contig00010039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010039
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280666.1| PREDICTED: uncharacterized protein LOC100266...   179   3e-43
emb|CAN66524.1| hypothetical protein VITISV_034969 [Vitis vinifera]   179   3e-43
ref|XP_002320411.1| predicted protein [Populus trichocarpa] gi|1...   176   2e-42
ref|XP_002521586.1| conserved hypothetical protein [Ricinus comm...   176   2e-42
ref|XP_002331815.1| predicted protein [Populus trichocarpa] gi|2...   175   3e-42

>ref|XP_002280666.1| PREDICTED: uncharacterized protein LOC100266079 [Vitis vinifera]
          Length = 167

 Score =  179 bits (453), Expect = 3e-43
 Identities = 83/104 (79%), Positives = 91/104 (87%), Gaps = 7/104 (6%)
 Frame = -1

Query: 293 MSNERGKELVMGSTSAP-------LSRYESQKRRDWNTFGQYLKNQRPPVQLSQCSYNHV 135
           MS+ERGK+L  GS+ +P        SRYESQKRRDWNTFGQYLKNQRPPV LSQC+ NHV
Sbjct: 1   MSSERGKDLAEGSSRSPGDQQSVTPSRYESQKRRDWNTFGQYLKNQRPPVPLSQCNCNHV 60

Query: 134 LEFLRYLDQFGKTKVHVQGCVFFGQPEPPAPCTCPLRQAWGSLD 3
           L+FLRYLDQFGKTKVH+QGC+FFGQPEPPAPCTCPLRQAWGSLD
Sbjct: 61  LDFLRYLDQFGKTKVHLQGCMFFGQPEPPAPCTCPLRQAWGSLD 104


>emb|CAN66524.1| hypothetical protein VITISV_034969 [Vitis vinifera]
          Length = 158

 Score =  179 bits (453), Expect = 3e-43
 Identities = 83/104 (79%), Positives = 91/104 (87%), Gaps = 7/104 (6%)
 Frame = -1

Query: 293 MSNERGKELVMGSTSAP-------LSRYESQKRRDWNTFGQYLKNQRPPVQLSQCSYNHV 135
           MS+ERGK+L  GS+ +P        SRYESQKRRDWNTFGQYLKNQRPPV LSQC+ NHV
Sbjct: 1   MSSERGKDLAEGSSRSPGDQQSVTPSRYESQKRRDWNTFGQYLKNQRPPVPLSQCNCNHV 60

Query: 134 LEFLRYLDQFGKTKVHVQGCVFFGQPEPPAPCTCPLRQAWGSLD 3
           L+FLRYLDQFGKTKVH+QGC+FFGQPEPPAPCTCPLRQAWGSLD
Sbjct: 61  LDFLRYLDQFGKTKVHLQGCMFFGQPEPPAPCTCPLRQAWGSLD 104


>ref|XP_002320411.1| predicted protein [Populus trichocarpa] gi|118484025|gb|ABK93899.1|
           unknown [Populus trichocarpa]
           gi|222861184|gb|EEE98726.1| predicted protein [Populus
           trichocarpa]
          Length = 170

 Score =  176 bits (446), Expect = 2e-42
 Identities = 81/101 (80%), Positives = 89/101 (88%), Gaps = 4/101 (3%)
 Frame = -1

Query: 293 MSNERGKELVMGSTS----APLSRYESQKRRDWNTFGQYLKNQRPPVQLSQCSYNHVLEF 126
           MS ERGK++  GS+     A  SRYESQKRRDWNTFGQYLKNQRPPV LSQC+ NHVL+F
Sbjct: 1   MSRERGKDIAEGSSENQQPATPSRYESQKRRDWNTFGQYLKNQRPPVPLSQCNSNHVLDF 60

Query: 125 LRYLDQFGKTKVHVQGCVFFGQPEPPAPCTCPLRQAWGSLD 3
           LRYLDQFGKTKVH+QGC+F+GQPEPPAPCTCPLRQAWGSLD
Sbjct: 61  LRYLDQFGKTKVHLQGCMFYGQPEPPAPCTCPLRQAWGSLD 101


>ref|XP_002521586.1| conserved hypothetical protein [Ricinus communis]
           gi|223539264|gb|EEF40857.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 174

 Score =  176 bits (445), Expect = 2e-42
 Identities = 82/104 (78%), Positives = 89/104 (85%), Gaps = 7/104 (6%)
 Frame = -1

Query: 293 MSNERGKELVMGSTS-------APLSRYESQKRRDWNTFGQYLKNQRPPVQLSQCSYNHV 135
           MS ERGK+L  GS+        A  SRYESQKRRDWNTFGQYLKNQRPPV LSQC+ NHV
Sbjct: 1   MSGERGKDLAEGSSELHQQHQPATPSRYESQKRRDWNTFGQYLKNQRPPVPLSQCNCNHV 60

Query: 134 LEFLRYLDQFGKTKVHVQGCVFFGQPEPPAPCTCPLRQAWGSLD 3
           L+FLRYLDQFGKTKVH+QGC+F+GQPEPPAPCTCPLRQAWGSLD
Sbjct: 61  LDFLRYLDQFGKTKVHLQGCMFYGQPEPPAPCTCPLRQAWGSLD 104


>ref|XP_002331815.1| predicted protein [Populus trichocarpa] gi|222874511|gb|EEF11642.1|
           predicted protein [Populus trichocarpa]
          Length = 176

 Score =  175 bits (444), Expect = 3e-42
 Identities = 81/108 (75%), Positives = 90/108 (83%), Gaps = 11/108 (10%)
 Frame = -1

Query: 293 MSNERGKELVMGSTSA-----------PLSRYESQKRRDWNTFGQYLKNQRPPVQLSQCS 147
           MS+ +GK++  GS+ A           PLSRYESQKRRDWNTFGQYL+NQRPPV LSQC+
Sbjct: 1   MSSNKGKDVAEGSSRAVAMAPDQQNPPPLSRYESQKRRDWNTFGQYLRNQRPPVALSQCN 60

Query: 146 YNHVLEFLRYLDQFGKTKVHVQGCVFFGQPEPPAPCTCPLRQAWGSLD 3
            NHVLEFLRYLDQFGKTKVH+QGCVFFGQPEPP PCTCPL+QAWGSLD
Sbjct: 61  ANHVLEFLRYLDQFGKTKVHLQGCVFFGQPEPPGPCTCPLKQAWGSLD 108


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