BLASTX nr result

ID: Coptis21_contig00010037 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010037
         (1403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142105.1| PREDICTED: DNA topoisomerase 6 subunit A-lik...   667   0.0  
emb|CBI32617.3| unnamed protein product [Vitis vinifera]              665   0.0  
ref|XP_002274790.1| PREDICTED: DNA topoisomerase 6 subunit A-lik...   665   0.0  
ref|XP_002525197.1| meiotic recombination protein spo11, putativ...   659   0.0  
ref|XP_002326329.1| predicted protein [Populus trichocarpa] gi|2...   656   0.0  

>ref|XP_004142105.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Cucumis sativus]
            gi|449521501|ref|XP_004167768.1| PREDICTED: DNA
            topoisomerase 6 subunit A-like [Cucumis sativus]
          Length = 420

 Score =  667 bits (1721), Expect = 0.0
 Identities = 331/408 (81%), Positives = 360/408 (88%)
 Frame = -2

Query: 1384 DEESQSIIPFKKRLKPDPEXXXXXXXXXXXXXXXXXXXXXXXXXLGLSSTCREVTDLDLS 1205
            + E ++ +PFK +LKPD                           LGLSS+CREVTDL LS
Sbjct: 13   NSEDEAQLPFKNKLKPDSFILQILKELSDASTASSSSSSKTLDDLGLSSSCREVTDLSLS 72

Query: 1204 SVQQEIEKIVFQITKQILSGSGFTFQVPTRGSANQLYVPELDRIVLKSKNSTRPYANVST 1025
            SVQ  IE ++ +I + ILSG+GF F VP+R  ANQLYVPELDRIVLK K + RPYAN+ST
Sbjct: 73   SVQATIESVILKIARSILSGNGFAFDVPSRSGANQLYVPELDRIVLKDKTALRPYANIST 132

Query: 1024 VRKTAVTTRILQLVHQLCTKSIHVTKRDLFYTDVKLFQDQSQSDAVLDDVSCMLGCTRSS 845
            VRK+ +TTRILQLVHQLC K+IHVTKRDLFYTDVKLFQDQ+QSD+VLDDVSC+LGCTRSS
Sbjct: 133  VRKSTITTRILQLVHQLCIKNIHVTKRDLFYTDVKLFQDQTQSDSVLDDVSCILGCTRSS 192

Query: 844  LNVIASEKGVVVGRLIFSDNGDIIDCTKMGMGGKAIPPNIDRVGDMQSDALFILLVEKDA 665
            LNVIA+EKGVVVGRLIFSDNGD+IDCTKMGMGGKAIPPNIDRVGDMQSDALFILLVEKDA
Sbjct: 193  LNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDALFILLVEKDA 252

Query: 664  AYMRLAEDRFYNRFPCIIITAKGQPDVATRLFLRKMKLELKLPVLALVDSDPYGLKILSV 485
            AY+RLAEDRFYNRFPCII+TAKGQPDVATRLFLRKMK+ELKLPVLALVDSDPYGLKILSV
Sbjct: 253  AYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSV 312

Query: 484  YGCGSKNMSYDSGNLTTPDIKWLGVRPSDLDKYKIPEQCRLPMTEQDIKTGKDMLEEDFV 305
            YGCGSKNMSYDS NLTTPDIKWLG+RPSDLDKYKIPEQCRLPMTEQDIKTGKD+LEEDFV
Sbjct: 313  YGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFV 372

Query: 304  KKNPGWVEELSLMVKTKQKAEIQALSTFGFQYLSEVYLPLKLQQQDWL 161
            KKNPGWVEELSLMVKTKQKAEIQALS+FGFQYLSEVYLPLKLQQ+DWL
Sbjct: 373  KKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQKDWL 420


>emb|CBI32617.3| unnamed protein product [Vitis vinifera]
          Length = 471

 Score =  665 bits (1717), Expect = 0.0
 Identities = 335/413 (81%), Positives = 360/413 (87%)
 Frame = -2

Query: 1399 DPISDDEESQSIIPFKKRLKPDPEXXXXXXXXXXXXXXXXXXXXXXXXXLGLSSTCREVT 1220
            DP   D++    +PF+  LK D                           LGL+STCREV 
Sbjct: 54   DPSDSDQQH---LPFRNSLKSDEIILQTLKDLCSSSSSDGATGTLTLSDLGLASTCREVA 110

Query: 1219 DLDLSSVQQEIEKIVFQITKQILSGSGFTFQVPTRGSANQLYVPELDRIVLKSKNSTRPY 1040
            DL LSSVQ  IE ++ ++T  ILSG GF+F VP+R SANQLYVPELDRIVLK K+S RP+
Sbjct: 111  DLSLSSVQSTIETLILRLTHSILSGQGFSFSVPSRSSANQLYVPELDRIVLKDKSSLRPF 170

Query: 1039 ANVSTVRKTAVTTRILQLVHQLCTKSIHVTKRDLFYTDVKLFQDQSQSDAVLDDVSCMLG 860
            ANVSTVRK+AVTTRILQL+HQLCTK+IHVTKRDLFYTDVKLFQDQ+QSD+VLDDVSCMLG
Sbjct: 171  ANVSTVRKSAVTTRILQLIHQLCTKNIHVTKRDLFYTDVKLFQDQTQSDSVLDDVSCMLG 230

Query: 859  CTRSSLNVIASEKGVVVGRLIFSDNGDIIDCTKMGMGGKAIPPNIDRVGDMQSDALFILL 680
            CTRSSLNVIASEKGVVVGRLIFSDNGD+IDCTKMGMGGKAIPPNIDRVGDMQSDALFILL
Sbjct: 231  CTRSSLNVIASEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDALFILL 290

Query: 679  VEKDAAYMRLAEDRFYNRFPCIIITAKGQPDVATRLFLRKMKLELKLPVLALVDSDPYGL 500
            VEKDAAY+RLAEDRFYNRFPCII+TAKGQPDVATRLFLRKMK ELKLPVLALVDSDPYGL
Sbjct: 291  VEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKTELKLPVLALVDSDPYGL 350

Query: 499  KILSVYGCGSKNMSYDSGNLTTPDIKWLGVRPSDLDKYKIPEQCRLPMTEQDIKTGKDML 320
            KILSVYGCGSKNMSYDS NLTTPDIKWLG+RPSDLDKY IPEQCRLPMTEQDIKTGKD+L
Sbjct: 351  KILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYSIPEQCRLPMTEQDIKTGKDLL 410

Query: 319  EEDFVKKNPGWVEELSLMVKTKQKAEIQALSTFGFQYLSEVYLPLKLQQQDWL 161
            EEDFVKKNPGWVEEL+LMVKTKQKAEIQALS+FGFQYLSEVYLPLKLQQQDWL
Sbjct: 411  EEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQQDWL 463


>ref|XP_002274790.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Vitis vinifera]
          Length = 420

 Score =  665 bits (1717), Expect = 0.0
 Identities = 335/413 (81%), Positives = 360/413 (87%)
 Frame = -2

Query: 1399 DPISDDEESQSIIPFKKRLKPDPEXXXXXXXXXXXXXXXXXXXXXXXXXLGLSSTCREVT 1220
            DP   D++    +PF+  LK D                           LGL+STCREV 
Sbjct: 11   DPSDSDQQH---LPFRNSLKSDEIILQTLKDLCSSSSSDGATGTLTLSDLGLASTCREVA 67

Query: 1219 DLDLSSVQQEIEKIVFQITKQILSGSGFTFQVPTRGSANQLYVPELDRIVLKSKNSTRPY 1040
            DL LSSVQ  IE ++ ++T  ILSG GF+F VP+R SANQLYVPELDRIVLK K+S RP+
Sbjct: 68   DLSLSSVQSTIETLILRLTHSILSGQGFSFSVPSRSSANQLYVPELDRIVLKDKSSLRPF 127

Query: 1039 ANVSTVRKTAVTTRILQLVHQLCTKSIHVTKRDLFYTDVKLFQDQSQSDAVLDDVSCMLG 860
            ANVSTVRK+AVTTRILQL+HQLCTK+IHVTKRDLFYTDVKLFQDQ+QSD+VLDDVSCMLG
Sbjct: 128  ANVSTVRKSAVTTRILQLIHQLCTKNIHVTKRDLFYTDVKLFQDQTQSDSVLDDVSCMLG 187

Query: 859  CTRSSLNVIASEKGVVVGRLIFSDNGDIIDCTKMGMGGKAIPPNIDRVGDMQSDALFILL 680
            CTRSSLNVIASEKGVVVGRLIFSDNGD+IDCTKMGMGGKAIPPNIDRVGDMQSDALFILL
Sbjct: 188  CTRSSLNVIASEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDALFILL 247

Query: 679  VEKDAAYMRLAEDRFYNRFPCIIITAKGQPDVATRLFLRKMKLELKLPVLALVDSDPYGL 500
            VEKDAAY+RLAEDRFYNRFPCII+TAKGQPDVATRLFLRKMK ELKLPVLALVDSDPYGL
Sbjct: 248  VEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKTELKLPVLALVDSDPYGL 307

Query: 499  KILSVYGCGSKNMSYDSGNLTTPDIKWLGVRPSDLDKYKIPEQCRLPMTEQDIKTGKDML 320
            KILSVYGCGSKNMSYDS NLTTPDIKWLG+RPSDLDKY IPEQCRLPMTEQDIKTGKD+L
Sbjct: 308  KILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYSIPEQCRLPMTEQDIKTGKDLL 367

Query: 319  EEDFVKKNPGWVEELSLMVKTKQKAEIQALSTFGFQYLSEVYLPLKLQQQDWL 161
            EEDFVKKNPGWVEEL+LMVKTKQKAEIQALS+FGFQYLSEVYLPLKLQQQDWL
Sbjct: 368  EEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQQDWL 420


>ref|XP_002525197.1| meiotic recombination protein spo11, putative [Ricinus communis]
            gi|223535494|gb|EEF37163.1| meiotic recombination protein
            spo11, putative [Ricinus communis]
          Length = 421

 Score =  659 bits (1701), Expect = 0.0
 Identities = 328/408 (80%), Positives = 356/408 (87%)
 Frame = -2

Query: 1384 DEESQSIIPFKKRLKPDPEXXXXXXXXXXXXXXXXXXXXXXXXXLGLSSTCREVTDLDLS 1205
            D ES + +PFK  LKPD                           L LS+TCREVTDL LS
Sbjct: 14   DPESTTELPFKNSLKPDSVILETLNSLLQSTSSSSSSKPLTLSDLSLSATCREVTDLSLS 73

Query: 1204 SVQQEIEKIVFQITKQILSGSGFTFQVPTRGSANQLYVPELDRIVLKSKNSTRPYANVST 1025
            SVQ  IE +V  +T+ ILSG GF+F VP+R + NQLYVPELDRIVLK KN+ RP+A++S+
Sbjct: 74   SVQSVIETVVLSLTQSILSGEGFSFNVPSRAATNQLYVPELDRIVLKDKNTLRPFAHISS 133

Query: 1024 VRKTAVTTRILQLVHQLCTKSIHVTKRDLFYTDVKLFQDQSQSDAVLDDVSCMLGCTRSS 845
            VRK+ +T +IL LVHQLC K+IHVTKRDLFYTDVKLFQDQ+QSDAVLDDVSCMLGCTRSS
Sbjct: 134  VRKSTITAKILSLVHQLCLKNIHVTKRDLFYTDVKLFQDQTQSDAVLDDVSCMLGCTRSS 193

Query: 844  LNVIASEKGVVVGRLIFSDNGDIIDCTKMGMGGKAIPPNIDRVGDMQSDALFILLVEKDA 665
            LNV+A+EKGVVVGRLIFSDNGD+IDCTKMGMGGKAIPPNIDRV DMQSDALFILLVEKDA
Sbjct: 194  LNVVAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVDDMQSDALFILLVEKDA 253

Query: 664  AYMRLAEDRFYNRFPCIIITAKGQPDVATRLFLRKMKLELKLPVLALVDSDPYGLKILSV 485
            AYMRLAEDRFYNRFPCII+TAKGQPDVATRLFLRKMK+ELKLPVLALVDSDPYGLKILSV
Sbjct: 254  AYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLALVDSDPYGLKILSV 313

Query: 484  YGCGSKNMSYDSGNLTTPDIKWLGVRPSDLDKYKIPEQCRLPMTEQDIKTGKDMLEEDFV 305
            YGCGSKNMSYDS NLTTPDIKWLG+RPSDLDKYKIPEQCRLPMTEQDIKTGKD+LEEDFV
Sbjct: 314  YGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFV 373

Query: 304  KKNPGWVEELSLMVKTKQKAEIQALSTFGFQYLSEVYLPLKLQQQDWL 161
            KKNPGWVEEL+LMVKTKQKAEIQALS+FGFQYLSEVYLPLKLQQQDWL
Sbjct: 374  KKNPGWVEELTLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQQDWL 421


>ref|XP_002326329.1| predicted protein [Populus trichocarpa] gi|222833522|gb|EEE71999.1|
            predicted protein [Populus trichocarpa]
          Length = 423

 Score =  656 bits (1693), Expect = 0.0
 Identities = 329/408 (80%), Positives = 352/408 (86%)
 Frame = -2

Query: 1384 DEESQSIIPFKKRLKPDPEXXXXXXXXXXXXXXXXXXXXXXXXXLGLSSTCREVTDLDLS 1205
            D +S + + FK  LKPD                           L LSS+CREV DL L+
Sbjct: 16   DPDSTTELLFKNLLKPDSVILQTLQSLVISTASASSSKPLTLSDLSLSSSCREVADLSLT 75

Query: 1204 SVQQEIEKIVFQITKQILSGSGFTFQVPTRGSANQLYVPELDRIVLKSKNSTRPYANVST 1025
            SVQ EIE +   I + ILSG GF+F VP+R + NQLYVPELDRIVLK KN+ RP+AN+S+
Sbjct: 76   SVQSEIEALTISIVQSILSGKGFSFNVPSRSATNQLYVPELDRIVLKDKNTLRPFANISS 135

Query: 1024 VRKTAVTTRILQLVHQLCTKSIHVTKRDLFYTDVKLFQDQSQSDAVLDDVSCMLGCTRSS 845
            VRK  +T RIL L+HQLC KSIHVTKRDLFYTDVKLFQDQ+QSDAVLDDVSCMLGCTRSS
Sbjct: 136  VRKCTITARILSLIHQLCLKSIHVTKRDLFYTDVKLFQDQTQSDAVLDDVSCMLGCTRSS 195

Query: 844  LNVIASEKGVVVGRLIFSDNGDIIDCTKMGMGGKAIPPNIDRVGDMQSDALFILLVEKDA 665
            LNVIA+EKGVVVGRLIFSDNGD+IDCTKMGMGGKAIPPNIDRVGDMQSDALFILLVEKDA
Sbjct: 196  LNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDMQSDALFILLVEKDA 255

Query: 664  AYMRLAEDRFYNRFPCIIITAKGQPDVATRLFLRKMKLELKLPVLALVDSDPYGLKILSV 485
            AYMRLAEDRFYNRFPCII+TAKGQPDVATRLFLRKMK ELKLPVLALVDSDPYGLKILSV
Sbjct: 256  AYMRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKTELKLPVLALVDSDPYGLKILSV 315

Query: 484  YGCGSKNMSYDSGNLTTPDIKWLGVRPSDLDKYKIPEQCRLPMTEQDIKTGKDMLEEDFV 305
            YGCGSKNMSYDS NLTTPDIKWLG+RPSDLDKYKIPEQCRLPMTEQDIKTGKD+LEEDFV
Sbjct: 316  YGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKTGKDLLEEDFV 375

Query: 304  KKNPGWVEELSLMVKTKQKAEIQALSTFGFQYLSEVYLPLKLQQQDWL 161
            KKNPGWVEELSLMVKTKQKAEIQALS+FGFQYLSEVYLPLKLQQQDWL
Sbjct: 376  KKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQQDWL 423


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