BLASTX nr result

ID: Coptis21_contig00010028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010028
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADG36380.1| promoter-binding protein SPL9 [Vitis vinifera]         159   3e-37
ref|XP_002278512.2| PREDICTED: promoter-binding protein SPL9 [Vi...   156   2e-36
ref|XP_003553428.1| PREDICTED: squamosa promoter-binding-like pr...   138   5e-31
ref|XP_002322678.1| hypothetical protein POPTRDRAFT_576281 [Popu...   133   1e-29
gb|ACL51015.1| squamosa promoter-binding protein [Citrus trifoli...   133   1e-29

>gb|ADG36380.1| promoter-binding protein SPL9 [Vitis vinifera]
          Length = 378

 Score =  159 bits (401), Expect = 3e-37
 Identities = 76/106 (71%), Positives = 85/106 (80%), Gaps = 2/106 (1%)
 Frame = -1

Query: 314 VNGLKFGKKIYFEDVGIGVPANKPSGGSSSVLATEGGGGAPVISKK--GRGVLQGGQPPR 141
           +NGLKFG+KIYFED+G+G PA   +G SSS  A  GG   P   KK  G GV+QGGQPPR
Sbjct: 21  LNGLKFGQKIYFEDLGVGAPAKSGTGSSSSSAAGSGGRPPPAPPKKVRGSGVVQGGQPPR 80

Query: 140 CQVEGCKLDLSDVKAYYSRHKVCGIHSKTPRVIVNGLEQRFCQQCS 3
           CQVEGCK+DLSD KAYYSRHKVCG+HSK+P VIV GLEQRFCQQCS
Sbjct: 81  CQVEGCKVDLSDAKAYYSRHKVCGMHSKSPTVIVAGLEQRFCQQCS 126


>ref|XP_002278512.2| PREDICTED: promoter-binding protein SPL9 [Vitis vinifera]
          Length = 379

 Score =  156 bits (395), Expect = 2e-36
 Identities = 75/107 (70%), Positives = 84/107 (78%), Gaps = 3/107 (2%)
 Frame = -1

Query: 314 VNGLKFGKKIYFEDVGIGVPANKPSGGSSSVLATEGGGGAPVISKK---GRGVLQGGQPP 144
           +NGLKFG+KIYFED+G+G PA   +G SSS  A   GG  P    K   G GV+QGGQPP
Sbjct: 21  LNGLKFGQKIYFEDLGVGAPAKSGTGSSSSSSAAGSGGRPPPAPPKKVRGSGVVQGGQPP 80

Query: 143 RCQVEGCKLDLSDVKAYYSRHKVCGIHSKTPRVIVNGLEQRFCQQCS 3
           RCQVEGCK+DLSD KAYYSRHKVCG+HSK+P VIV GLEQRFCQQCS
Sbjct: 81  RCQVEGCKVDLSDAKAYYSRHKVCGMHSKSPTVIVAGLEQRFCQQCS 127


>ref|XP_003553428.1| PREDICTED: squamosa promoter-binding-like protein 9-like [Glycine
           max]
          Length = 359

 Score =  138 bits (348), Expect = 5e-31
 Identities = 71/106 (66%), Positives = 81/106 (76%), Gaps = 2/106 (1%)
 Frame = -1

Query: 314 VNGLKFGKKIYFEDVGIGVPANK-PSGGSSSVLATEGGGGAPVISKKGRG-VLQGGQPPR 141
           +NGLKFG+KIYFEDVG+  PA    S  SSS  AT     +   S+KGRG  +Q  QPPR
Sbjct: 13  LNGLKFGQKIYFEDVGLATPATSLTSSSSSSSAATVTSSSS---SRKGRGGSVQPAQPPR 69

Query: 140 CQVEGCKLDLSDVKAYYSRHKVCGIHSKTPRVIVNGLEQRFCQQCS 3
           CQVEGCK+DLSD KAYYSRHKVCG+HSK+P VIV GL+QRFCQQCS
Sbjct: 70  CQVEGCKVDLSDAKAYYSRHKVCGMHSKSPSVIVAGLQQRFCQQCS 115


>ref|XP_002322678.1| hypothetical protein POPTRDRAFT_576281 [Populus trichocarpa]
           gi|222867308|gb|EEF04439.1| hypothetical protein
           POPTRDRAFT_576281 [Populus trichocarpa]
          Length = 375

 Score =  133 bits (335), Expect = 1e-29
 Identities = 70/105 (66%), Positives = 77/105 (73%), Gaps = 1/105 (0%)
 Frame = -1

Query: 314 VNGLKFGKKIYFED-VGIGVPANKPSGGSSSVLATEGGGGAPVISKKGRGVLQGGQPPRC 138
           VNGLKFGKKIYFED VG+G PA   +G SSS       G     S+K +G  Q  QPPRC
Sbjct: 24  VNGLKFGKKIYFEDHVGVGAPAKSGTGSSSS-------GSGSGSSRKAQGG-QHQQPPRC 75

Query: 137 QVEGCKLDLSDVKAYYSRHKVCGIHSKTPRVIVNGLEQRFCQQCS 3
           QVEGCK+DLSD K YYSRHKVC +HSK+PRVIV GL QRFCQQCS
Sbjct: 76  QVEGCKVDLSDAKTYYSRHKVCSMHSKSPRVIVAGLVQRFCQQCS 120


>gb|ACL51015.1| squamosa promoter-binding protein [Citrus trifoliata]
          Length = 388

 Score =  133 bits (335), Expect = 1e-29
 Identities = 67/105 (63%), Positives = 75/105 (71%), Gaps = 1/105 (0%)
 Frame = -1

Query: 314 VNGLKFGKKIYFEDVGIGVPANKPSGGSSSVLATEGGGGAPVISKKGRGVLQGGQ-PPRC 138
           +NGLKFGKKIYFEDVG        SG SS   +  G G    +   G G++  GQ PPRC
Sbjct: 30  LNGLKFGKKIYFEDVGTAGAPFPGSGSSSGSGSGSGSGSGRKVRGVGGGMVTSGQQPPRC 89

Query: 137 QVEGCKLDLSDVKAYYSRHKVCGIHSKTPRVIVNGLEQRFCQQCS 3
           QVEGCK+DLSD KAYYSRHKVCG+HSK+P V V GLEQRFCQQCS
Sbjct: 90  QVEGCKVDLSDAKAYYSRHKVCGMHSKSPVVTVAGLEQRFCQQCS 134


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