BLASTX nr result

ID: Coptis21_contig00010019 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00010019
         (600 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285502.1| PREDICTED: ubiquinone biosynthesis protein C...   271   6e-71
ref|XP_002312287.1| predicted protein [Populus trichocarpa] gi|2...   266   2e-69
ref|XP_004144164.1| PREDICTED: ubiquinone biosynthesis protein C...   265   4e-69
ref|NP_001054237.1| Os04g0674200 [Oryza sativa Japonica Group] g...   265   4e-69
gb|AFW59859.1| ubiquinone biosynthesis protein COQ4 isoform 1 [Z...   265   5e-69

>ref|XP_002285502.1| PREDICTED: ubiquinone biosynthesis protein COQ4 homolog,
           mitochondrial [Vitis vinifera]
          Length = 227

 Score =  271 bits (693), Expect = 6e-71
 Identities = 134/186 (72%), Positives = 145/186 (77%)
 Frame = +1

Query: 43  DPRRADLIAALGETTGRPFFERVLERMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 222
           DPRRADLIAALGETTG+P FERVLERM                                 
Sbjct: 29  DPRRADLIAALGETTGKPAFERVLERMKKSPEGQAILLDRPRVVSARVGHA--------- 79

Query: 223 XXXWDLPENTFGAAYARFMGSRNFSPDDRPPVRFMETEELAYVAMRAREVHDFWHTLFGL 402
              WD+P NTFGAAYA+FMGSRNFSPDDRPPVRFMET+ELAYVAMRAREVHDFWHTLF L
Sbjct: 80  ---WDMPANTFGAAYAKFMGSRNFSPDDRPPVRFMETDELAYVAMRAREVHDFWHTLFSL 136

Query: 403 PTNLIGESALKVIEFEQMLLPMCLLSVVGGTARFNQKQRALFFQHYFPWASRAGLQCTDL 582
           PTNLIGESALKVIEFEQM LPMCLLSV+GGTARF++KQRALFFQHYFPWA+RAG+QCTDL
Sbjct: 137 PTNLIGESALKVIEFEQMFLPMCLLSVIGGTARFSEKQRALFFQHYFPWATRAGMQCTDL 196

Query: 583 ISVYYE 600
           + +YYE
Sbjct: 197 MCIYYE 202


>ref|XP_002312287.1| predicted protein [Populus trichocarpa] gi|222852107|gb|EEE89654.1|
           predicted protein [Populus trichocarpa]
          Length = 229

 Score =  266 bits (680), Expect = 2e-69
 Identities = 135/186 (72%), Positives = 141/186 (75%)
 Frame = +1

Query: 43  DPRRADLIAALGETTGRPFFERVLERMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 222
           DPRRADLIAALGETTG+P FERV+ERM                                 
Sbjct: 28  DPRRADLIAALGETTGKPAFERVVERMKKSPEGRAVLLERPRVISAQVGHA--------- 78

Query: 223 XXXWDLPENTFGAAYARFMGSRNFSPDDRPPVRFMETEELAYVAMRAREVHDFWHTLFGL 402
              WDLP NTFGAAYARFMGSRNFSPDDRPPVRFMETEELAYVAMRAREVHDFWHTLFGL
Sbjct: 79  ---WDLPANTFGAAYARFMGSRNFSPDDRPPVRFMETEELAYVAMRAREVHDFWHTLFGL 135

Query: 403 PTNLIGESALKVIEFEQMLLPMCLLSVVGGTARFNQKQRALFFQHYFPWASRAGLQCTDL 582
           PTNLIGESALKVIEFEQM LPMCL+SVVGGT RF +KQR LFFQHYFPWA RAG+Q TDL
Sbjct: 136 PTNLIGESALKVIEFEQMYLPMCLMSVVGGTVRFTEKQRKLFFQHYFPWAIRAGMQSTDL 195

Query: 583 ISVYYE 600
           + VYYE
Sbjct: 196 MCVYYE 201


>ref|XP_004144164.1| PREDICTED: ubiquinone biosynthesis protein COQ4 homolog,
           mitochondrial-like [Cucumis sativus]
          Length = 226

 Score =  265 bits (678), Expect = 4e-69
 Identities = 132/186 (70%), Positives = 141/186 (75%)
 Frame = +1

Query: 43  DPRRADLIAALGETTGRPFFERVLERMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 222
           DPRRADLIAALGETTG+P FERVLERM                                 
Sbjct: 28  DPRRADLIAALGETTGKPAFERVLERMKKSAEGRAVLMERPRVLSSEVGHA--------- 78

Query: 223 XXXWDLPENTFGAAYARFMGSRNFSPDDRPPVRFMETEELAYVAMRAREVHDFWHTLFGL 402
              WDLP NTFG AYA FMGSRNFSPDDRPPVRFM+TEEL YVAMRAREVHDFWHTLFGL
Sbjct: 79  ---WDLPSNTFGGAYANFMGSRNFSPDDRPPVRFMDTEELEYVAMRAREVHDFWHTLFGL 135

Query: 403 PTNLIGESALKVIEFEQMLLPMCLLSVVGGTARFNQKQRALFFQHYFPWASRAGLQCTDL 582
           PTNLIGESALKVIEFEQM LPMC+LSV+GGTARFN+KQR LFFQHYFPW+ RAG+QCTDL
Sbjct: 136 PTNLIGESALKVIEFEQMHLPMCMLSVLGGTARFNEKQRKLFFQHYFPWSIRAGMQCTDL 195

Query: 583 ISVYYE 600
           + +YYE
Sbjct: 196 MCIYYE 201


>ref|NP_001054237.1| Os04g0674200 [Oryza sativa Japonica Group]
           gi|38344918|emb|CAE03234.2| OSJNBa0018M05.9 [Oryza
           sativa Japonica Group] gi|113565808|dbj|BAF16151.1|
           Os04g0674200 [Oryza sativa Japonica Group]
           gi|125592039|gb|EAZ32389.1| hypothetical protein
           OsJ_16598 [Oryza sativa Japonica Group]
           gi|215678878|dbj|BAG95315.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215737337|dbj|BAG96266.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 227

 Score =  265 bits (678), Expect = 4e-69
 Identities = 130/186 (69%), Positives = 145/186 (77%)
 Frame = +1

Query: 43  DPRRADLIAALGETTGRPFFERVLERMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 222
           DPRRADLIAALGETTG+P F+RVL+RM                                 
Sbjct: 27  DPRRADLIAALGETTGKPAFQRVLQRMRNSAEGRDVLLERPRVISTQVSHA--------- 77

Query: 223 XXXWDLPENTFGAAYARFMGSRNFSPDDRPPVRFMETEELAYVAMRAREVHDFWHTLFGL 402
              WD+P+NTFGAAYA+FMGSRNFSPDDRPPVRFM+T+ELAYVA RAREVHDFWH LFGL
Sbjct: 78  ---WDMPQNTFGAAYAQFMGSRNFSPDDRPPVRFMDTDELAYVATRAREVHDFWHVLFGL 134

Query: 403 PTNLIGESALKVIEFEQMLLPMCLLSVVGGTARFNQKQRALFFQHYFPWASRAGLQCTDL 582
           PTNLIGE+ALKVIEFEQM LPMC+LSVVGG+ARFN+KQR LFFQHYFPWAS+AGL+CTDL
Sbjct: 135 PTNLIGETALKVIEFEQMFLPMCMLSVVGGSARFNEKQRTLFFQHYFPWASKAGLKCTDL 194

Query: 583 ISVYYE 600
           +SVYYE
Sbjct: 195 MSVYYE 200


>gb|AFW59859.1| ubiquinone biosynthesis protein COQ4 isoform 1 [Zea mays]
           gi|413919928|gb|AFW59860.1| ubiquinone biosynthesis
           protein COQ4 isoform 2 [Zea mays]
          Length = 227

 Score =  265 bits (677), Expect = 5e-69
 Identities = 131/186 (70%), Positives = 145/186 (77%)
 Frame = +1

Query: 43  DPRRADLIAALGETTGRPFFERVLERMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 222
           DPRRADLIAALGETTG+P FERVL+RM                                 
Sbjct: 27  DPRRADLIAALGETTGKPAFERVLQRMKNSAEGREVLSERPRVVSSQVSHA--------- 77

Query: 223 XXXWDLPENTFGAAYARFMGSRNFSPDDRPPVRFMETEELAYVAMRAREVHDFWHTLFGL 402
              WDLP+NTFGAAYA+FMGSRNFSPDDRPPVRFM+T+ELAYVA RAREVHDFWH LFGL
Sbjct: 78  ---WDLPQNTFGAAYAQFMGSRNFSPDDRPPVRFMDTDELAYVATRAREVHDFWHVLFGL 134

Query: 403 PTNLIGESALKVIEFEQMLLPMCLLSVVGGTARFNQKQRALFFQHYFPWASRAGLQCTDL 582
           PTNLIGE+ALKVIEFEQM LPMC+LSVVGG+ARF+ KQRALFFQHYFPWA++AGL+CTDL
Sbjct: 135 PTNLIGETALKVIEFEQMFLPMCMLSVVGGSARFSDKQRALFFQHYFPWATKAGLKCTDL 194

Query: 583 ISVYYE 600
           +SVYYE
Sbjct: 195 MSVYYE 200


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