BLASTX nr result
ID: Coptis21_contig00009917
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00009917
(688 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265367.1| PREDICTED: CLIP-associating protein-like [Vi... 50 8e-10
emb|CAN66676.1| hypothetical protein VITISV_032909 [Vitis vinifera] 50 8e-10
emb|CBI37243.3| unnamed protein product [Vitis vinifera] 50 9e-10
ref|XP_002303094.1| predicted protein [Populus trichocarpa] gi|2... 52 1e-09
ref|XP_002521154.1| conserved hypothetical protein [Ricinus comm... 50 1e-09
>ref|XP_002265367.1| PREDICTED: CLIP-associating protein-like [Vitis vinifera]
Length = 1440
Score = 50.4 bits (119), Expect(2) = 8e-10
Identities = 28/61 (45%), Positives = 34/61 (55%), Gaps = 23/61 (37%)
Frame = +3
Query: 183 QVSNEAERCLTVVLCQYDPFRCLT-----------------------LVARLSQEDLMVQ 293
+VSNEAE CLT+VL QYDPFRCL+ LV RLSQE++M Q
Sbjct: 1307 KVSNEAEHCLTIVLSQYDPFRCLSVIIPLLVTEDEKTLVTCINCLTKLVGRLSQEEVMAQ 1366
Query: 294 M 296
+
Sbjct: 1367 L 1367
Score = 38.5 bits (88), Expect(2) = 8e-10
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +2
Query: 59 ALSLLVEMLNNQKDSMDDSVEVV 127
ALSL+VEML NQK SM+DSVE+V
Sbjct: 1271 ALSLIVEMLKNQKGSMEDSVEIV 1293
Score = 45.8 bits (107), Expect(2) = 6e-07
Identities = 23/43 (53%), Positives = 32/43 (74%)
Frame = +1
Query: 265 DSHKKILWCRCS*VLVLYILLGKSFLRYLEGLNSRQLRLVSEY 393
D K +++C ++ +YI+LGK+FL YLEGLNS QLRLV+ Y
Sbjct: 1384 DVRKTVVFC----LVDIYIMLGKAFLPYLEGLNSTQLRLVTIY 1422
Score = 33.5 bits (75), Expect(2) = 6e-07
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +2
Query: 386 VSIYANRISQARSGTAIDPN 445
V+IYANRISQAR+G ID N
Sbjct: 1419 VTIYANRISQARTGATIDAN 1438
>emb|CAN66676.1| hypothetical protein VITISV_032909 [Vitis vinifera]
Length = 1135
Score = 50.4 bits (119), Expect(2) = 8e-10
Identities = 28/61 (45%), Positives = 34/61 (55%), Gaps = 23/61 (37%)
Frame = +3
Query: 183 QVSNEAERCLTVVLCQYDPFRCLT-----------------------LVARLSQEDLMVQ 293
+VSNEAE CLT+VL QYDPFRCL+ LV RLSQE++M Q
Sbjct: 1002 KVSNEAEHCLTIVLSQYDPFRCLSVIIPLLVTEDEKTLVTCINCLTKLVGRLSQEEVMAQ 1061
Query: 294 M 296
+
Sbjct: 1062 L 1062
Score = 38.5 bits (88), Expect(2) = 8e-10
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +2
Query: 59 ALSLLVEMLNNQKDSMDDSVEVV 127
ALSL+VEML NQK SM+DSVE+V
Sbjct: 966 ALSLIVEMLKNQKGSMEDSVEIV 988
Score = 45.8 bits (107), Expect(2) = 6e-07
Identities = 23/43 (53%), Positives = 32/43 (74%)
Frame = +1
Query: 265 DSHKKILWCRCS*VLVLYILLGKSFLRYLEGLNSRQLRLVSEY 393
D K +++C ++ +YI+LGK+FL YLEGLNS QLRLV+ Y
Sbjct: 1079 DVRKTVVFC----LVDIYIMLGKAFLPYLEGLNSTQLRLVTIY 1117
Score = 33.5 bits (75), Expect(2) = 6e-07
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +2
Query: 386 VSIYANRISQARSGTAIDPN 445
V+IYANRISQAR+G ID N
Sbjct: 1114 VTIYANRISQARTGATIDAN 1133
>emb|CBI37243.3| unnamed protein product [Vitis vinifera]
Length = 275
Score = 50.4 bits (119), Expect(2) = 9e-10
Identities = 28/61 (45%), Positives = 34/61 (55%), Gaps = 23/61 (37%)
Frame = +3
Query: 183 QVSNEAERCLTVVLCQYDPFRCLT-----------------------LVARLSQEDLMVQ 293
+VSNEAE CLT+VL QYDPFRCL+ LV RLSQE++M Q
Sbjct: 142 KVSNEAEHCLTIVLSQYDPFRCLSVIIPLLVTEDEKTLVTCINCLTKLVGRLSQEEVMAQ 201
Query: 294 M 296
+
Sbjct: 202 L 202
Score = 38.5 bits (88), Expect(2) = 9e-10
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +2
Query: 59 ALSLLVEMLNNQKDSMDDSVEVV 127
ALSL+VEML NQK SM+DSVE+V
Sbjct: 106 ALSLIVEMLKNQKGSMEDSVEIV 128
Score = 45.8 bits (107), Expect(2) = 6e-07
Identities = 23/43 (53%), Positives = 32/43 (74%)
Frame = +1
Query: 265 DSHKKILWCRCS*VLVLYILLGKSFLRYLEGLNSRQLRLVSEY 393
D K +++C ++ +YI+LGK+FL YLEGLNS QLRLV+ Y
Sbjct: 219 DVRKTVVFC----LVDIYIMLGKAFLPYLEGLNSTQLRLVTIY 257
Score = 33.5 bits (75), Expect(2) = 6e-07
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +2
Query: 386 VSIYANRISQARSGTAIDPN 445
V+IYANRISQAR+G ID N
Sbjct: 254 VTIYANRISQARTGATIDAN 273
>ref|XP_002303094.1| predicted protein [Populus trichocarpa] gi|222844820|gb|EEE82367.1|
predicted protein [Populus trichocarpa]
Length = 1426
Score = 52.0 bits (123), Expect(2) = 1e-09
Identities = 30/61 (49%), Positives = 34/61 (55%), Gaps = 23/61 (37%)
Frame = +3
Query: 183 QVSNEAERCLTVVLCQYDPFRCLT-----------------------LVARLSQEDLMVQ 293
+VSNEAE CLTV L QYDPFRCL+ LV RLSQE+LMVQ
Sbjct: 1293 KVSNEAEHCLTVALSQYDPFRCLSVIVPLLVTEDEKTLVTCINCLTKLVGRLSQEELMVQ 1352
Query: 294 M 296
+
Sbjct: 1353 L 1353
Score = 36.6 bits (83), Expect(2) = 1e-09
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = +2
Query: 62 LSLLVEMLNNQKDSMDDSVEV 124
LSL+VEML NQKD+M+DS+E+
Sbjct: 1258 LSLIVEMLKNQKDAMEDSIEI 1278
Score = 43.9 bits (102), Expect(2) = 9e-08
Identities = 22/43 (51%), Positives = 32/43 (74%)
Frame = +1
Query: 265 DSHKKILWCRCS*VLVLYILLGKSFLRYLEGLNSRQLRLVSEY 393
D K +++C ++ +YI+LGK+FL +LEGLNS QLRLV+ Y
Sbjct: 1370 DVRKTVVFC----LVDIYIMLGKAFLPHLEGLNSTQLRLVTIY 1408
Score = 38.1 bits (87), Expect(2) = 9e-08
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +2
Query: 386 VSIYANRISQARSGTAIDPNH 448
V+IYANRISQAR+GTAID +H
Sbjct: 1405 VTIYANRISQARTGTAIDASH 1425
>ref|XP_002521154.1| conserved hypothetical protein [Ricinus communis]
gi|223539723|gb|EEF41305.1| conserved hypothetical
protein [Ricinus communis]
Length = 1384
Score = 50.1 bits (118), Expect(2) = 1e-09
Identities = 28/61 (45%), Positives = 34/61 (55%), Gaps = 23/61 (37%)
Frame = +3
Query: 183 QVSNEAERCLTVVLCQYDPFRCLT-----------------------LVARLSQEDLMVQ 293
+VSNEAE CL++VL QYDPFRCL+ LV RLSQE+LM Q
Sbjct: 1251 KVSNEAEHCLSIVLSQYDPFRCLSVIVPLLVTEDEKTLVTCINCLTKLVGRLSQEELMTQ 1310
Query: 294 M 296
+
Sbjct: 1311 L 1311
Score = 38.5 bits (88), Expect(2) = 1e-09
Identities = 17/23 (73%), Positives = 22/23 (95%)
Frame = +2
Query: 59 ALSLLVEMLNNQKDSMDDSVEVV 127
ALSL+VEML NQKD+++DS+EVV
Sbjct: 1215 ALSLIVEMLKNQKDAVEDSIEVV 1237
Score = 45.8 bits (107), Expect(2) = 7e-08
Identities = 23/43 (53%), Positives = 32/43 (74%)
Frame = +1
Query: 265 DSHKKILWCRCS*VLVLYILLGKSFLRYLEGLNSRQLRLVSEY 393
D K +++C ++ +YI+LGK+FL YLEGLNS QLRLV+ Y
Sbjct: 1328 DVRKTVVFC----LVDIYIMLGKAFLPYLEGLNSTQLRLVTIY 1366
Score = 36.6 bits (83), Expect(2) = 7e-08
Identities = 16/21 (76%), Positives = 20/21 (95%)
Frame = +2
Query: 386 VSIYANRISQARSGTAIDPNH 448
V+IYANRISQAR+GTAI+ +H
Sbjct: 1363 VTIYANRISQARTGTAIEASH 1383