BLASTX nr result

ID: Coptis21_contig00009911 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009911
         (589 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK93622.1| unknown [Populus trichocarpa]                           75   6e-12
ref|XP_002284462.1| PREDICTED: uncharacterized protein LOC100255...    74   2e-11
ref|XP_002308923.1| predicted protein [Populus trichocarpa] gi|2...    72   9e-11
emb|CBI29802.3| unnamed protein product [Vitis vinifera]               67   3e-09
ref|XP_002533845.1| conserved hypothetical protein [Ricinus comm...    63   3e-08

>gb|ABK93622.1| unknown [Populus trichocarpa]
          Length = 121

 Score = 75.5 bits (184), Expect = 6e-12
 Identities = 53/130 (40%), Positives = 68/130 (52%)
 Frame = +3

Query: 24  MAAPVKPNNELEEVLKPFYXXXXXXXXXXXXXXXTVGSNKTDGENEELVKIISELQCKLE 203
           MAA     N LE VLKPFY               +V SN+ D  +EE +K ISELQ KLE
Sbjct: 1   MAASETKTN-LEGVLKPFYQRASEAEDRLSRLEASVASNR-DAGSEEHLKTISELQAKLE 58

Query: 204 EVKAEQHKATLENKKLETQNAKLQYRILHLVRALEEEETKQESFFGESSLVAKLQYRIAH 383
              AE      + KKL  +N KLQYR++HLV+A+ E + K ES  G S   A+       
Sbjct: 59  GANAELASEREKAKKLAVENGKLQYRVIHLVQAIREGDAKLESLKGGSEASAE------- 111

Query: 384 LVRALENVKL 413
            +  LEN++L
Sbjct: 112 AIPKLENLRL 121


>ref|XP_002284462.1| PREDICTED: uncharacterized protein LOC100255580 [Vitis vinifera]
           gi|147846708|emb|CAN80638.1| hypothetical protein
           VITISV_026887 [Vitis vinifera]
          Length = 102

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 43/98 (43%), Positives = 60/98 (61%), Gaps = 4/98 (4%)
 Frame = +3

Query: 51  ELEEVLKPFYXXXXXXXXXXXXXXXTVGSNKTDGENEELVKIISELQCKLEEVKAEQ--- 221
           +++EVLKPF+                + S K  G NEEL+K+IS+LQ KL+  +AEQ   
Sbjct: 5   DMKEVLKPFHQRASEAEDRLSKLEAALSSTKDSG-NEELLKMISDLQSKLQHAEAEQISE 63

Query: 222 -HKATLENKKLETQNAKLQYRILHLVRALEEEETKQES 332
             KA  + +KL  +NAKLQYR+ HLVRAL+E + K E+
Sbjct: 64  REKAQKDIQKLTVENAKLQYRVTHLVRALKEADCKLEA 101


>ref|XP_002308923.1| predicted protein [Populus trichocarpa] gi|222854899|gb|EEE92446.1|
           predicted protein [Populus trichocarpa]
          Length = 136

 Score = 71.6 bits (174), Expect = 9e-11
 Identities = 46/103 (44%), Positives = 57/103 (55%)
 Frame = +3

Query: 24  MAAPVKPNNELEEVLKPFYXXXXXXXXXXXXXXXTVGSNKTDGENEELVKIISELQCKLE 203
           MAA     N LE VLKPFY               +V SN+ D  +EE +K ISELQ KLE
Sbjct: 1   MAASETKTN-LEGVLKPFYQRASEAEDRLSRLEASVASNR-DAGSEEHLKTISELQAKLE 58

Query: 204 EVKAEQHKATLENKKLETQNAKLQYRILHLVRALEEEETKQES 332
              AE      + KKL  +N KLQYR++HLV+A+ E + K ES
Sbjct: 59  GANAELASEREKAKKLAVENGKLQYRVIHLVQAIREGDAKLES 101


>emb|CBI29802.3| unnamed protein product [Vitis vinifera]
          Length = 86

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 36/70 (51%), Positives = 49/70 (70%), Gaps = 4/70 (5%)
 Frame = +3

Query: 135 SNKTDGENEELVKIISELQCKLEEVKAEQ----HKATLENKKLETQNAKLQYRILHLVRA 302
           S+  D  NEEL+K+IS+LQ KL+  +AEQ     KA  + +KL  +NAKLQYR+ HLVRA
Sbjct: 16  SSTKDSGNEELLKMISDLQSKLQHAEAEQISEREKAQKDIQKLTVENAKLQYRVTHLVRA 75

Query: 303 LEEEETKQES 332
           L+E + K E+
Sbjct: 76  LKEADCKLEA 85


>ref|XP_002533845.1| conserved hypothetical protein [Ricinus communis]
           gi|223526212|gb|EEF28536.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 119

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 42/97 (43%), Positives = 60/97 (61%), Gaps = 4/97 (4%)
 Frame = +3

Query: 135 SNKTDGENEELVKIISELQCKLE----EVKAEQHKATLENKKLETQNAKLQYRILHLVRA 302
           ++K D +NE L+K I ELQ KLE    E+ +EQ KA    +KL  +NAKLQYRILHLV+A
Sbjct: 34  ASKKDAQNEGLLKTIGELQTKLECAHAELASEQEKA----RKLAVENAKLQYRILHLVQA 89

Query: 303 LEEEETKQESFFGESSLVAKLQYRIAHLVRALENVKL 413
           +   ++K E+    S   AK     A  ++ LE+++L
Sbjct: 90  VRHSDSKLENMTSGSE--AK-----AQTIKKLEDLRL 119


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