BLASTX nr result

ID: Coptis21_contig00009908 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009908
         (1514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29706.3| unnamed protein product [Vitis vinifera]              387   e-105
ref|XP_002262918.1| PREDICTED: uncharacterized protein LOC100249...   387   e-105
emb|CAN72774.1| hypothetical protein VITISV_026284 [Vitis vinifera]   381   e-103
ref|XP_002526452.1| yth domain-containing protein, putative [Ric...   339   1e-90
ref|XP_002328776.1| predicted protein [Populus trichocarpa] gi|2...   337   4e-90

>emb|CBI29706.3| unnamed protein product [Vitis vinifera]
          Length = 708

 Score =  387 bits (995), Expect = e-105
 Identities = 212/420 (50%), Positives = 272/420 (64%), Gaps = 3/420 (0%)
 Frame = +3

Query: 138  NGTYKSYDHGRLSARDAAAALYSGPSSWLNSRYSNSLKTSATVDAKVSRVPLSSKSVIST 317
            NGT  ++ + +  +R  A+A          +    S+K + TV  K S +P  SKS  S 
Sbjct: 272  NGTNANFGNIKSGSRPTASA---------KANNFPSMKANGTVANKYS-LPFDSKSHQSA 321

Query: 318  HPSNLSNFSHQTQRYNSSDKVPQVSSDIQSAVINRDSYAARSFSLVSNQVQGLFP-NGAS 494
             PSN S    Q+Q     +K   + SD  +      +  ++ FS  +NQ QG FP NG  
Sbjct: 322  APSNFSKSIFQSQPLKPLNKASHLGSDFPAGFAKGFNPVSK-FSSFTNQKQGFFPHNGVM 380

Query: 495  SYQTNIGTWGGYDGYNLGEKFNRSSSFEAQKEATRGPRSRRVHNLMNLSDEKEQFGPRVR 674
            +Y+ N   W G + Y L EK NR+  FE+  E T GPR+R  +  +N + EKE+ G  VR
Sbjct: 381  NYRPNSRAWNGNEKYKLREKSNRNGHFESSTELTCGPRARNRNAPLNSATEKEELGLMVR 440

Query: 675  RDRYNLPDFQISYDNAKFFVIKSYSEDDIQKSIKYDVWSSTPTGNKKLNAAFNDAQTRHS 854
            RD+YNL DFQ  Y+NAKF+VIKS+SEDDI K IKYDVW+STP GNKKL+AAF+DA+ + +
Sbjct: 441  RDQYNLQDFQTEYENAKFYVIKSFSEDDIHKCIKYDVWASTPNGNKKLDAAFHDAEAKAN 500

Query: 855  ETGTGCPVFLFFSVNGSGQFLGLAEMNGPVDFEKNMDFWQQDKWNGFFHLKWHIIKDIPN 1034
            ETGT  P+FLFFSVNGSGQF+G+AEM G VDF K+MDFWQ DKWNGFF +KWHI+KDIPN
Sbjct: 501  ETGTKFPIFLFFSVNGSGQFVGVAEMVGQVDFNKDMDFWQLDKWNGFFPVKWHIVKDIPN 560

Query: 1035 NRLRHIILENNDNKPVTYTRDTQEVGLKQGLEMLSIFKTYPAMTSMLDDYKFYEDQEKSL 1214
            ++LRHI LE+N+N+ VTYTRDTQE+GLKQG+EML IFK Y A TSM DD+ FYE++EKSL
Sbjct: 561  SQLRHITLESNENRSVTYTRDTQEIGLKQGVEMLKIFKNYSARTSMFDDFNFYENREKSL 620

Query: 1215 QARKGSKEEPSNYDN--HKTEFLERDFEAGLRKAEEAPMTVRKVSEYTSLATLARNLSLS 1388
             AR+ SK  P +        + L +      RK EE   T R   +  SL  L +NLSLS
Sbjct: 621  HARRSSKPPPPSQMEIYGSGDDLPKHLHGEERKTEEPARTSRS-HDPKSLINLTKNLSLS 679


>ref|XP_002262918.1| PREDICTED: uncharacterized protein LOC100249242 [Vitis vinifera]
          Length = 608

 Score =  387 bits (995), Expect = e-105
 Identities = 212/420 (50%), Positives = 272/420 (64%), Gaps = 3/420 (0%)
 Frame = +3

Query: 138  NGTYKSYDHGRLSARDAAAALYSGPSSWLNSRYSNSLKTSATVDAKVSRVPLSSKSVIST 317
            NGT  ++ + +  +R  A+A          +    S+K + TV  K S +P  SKS  S 
Sbjct: 172  NGTNANFGNIKSGSRPTASA---------KANNFPSMKANGTVANKYS-LPFDSKSHQSA 221

Query: 318  HPSNLSNFSHQTQRYNSSDKVPQVSSDIQSAVINRDSYAARSFSLVSNQVQGLFP-NGAS 494
             PSN S    Q+Q     +K   + SD  +      +  ++ FS  +NQ QG FP NG  
Sbjct: 222  APSNFSKSIFQSQPLKPLNKASHLGSDFPAGFAKGFNPVSK-FSSFTNQKQGFFPHNGVM 280

Query: 495  SYQTNIGTWGGYDGYNLGEKFNRSSSFEAQKEATRGPRSRRVHNLMNLSDEKEQFGPRVR 674
            +Y+ N   W G + Y L EK NR+  FE+  E T GPR+R  +  +N + EKE+ G  VR
Sbjct: 281  NYRPNSRAWNGNEKYKLREKSNRNGHFESSTELTCGPRARNRNAPLNSATEKEELGLMVR 340

Query: 675  RDRYNLPDFQISYDNAKFFVIKSYSEDDIQKSIKYDVWSSTPTGNKKLNAAFNDAQTRHS 854
            RD+YNL DFQ  Y+NAKF+VIKS+SEDDI K IKYDVW+STP GNKKL+AAF+DA+ + +
Sbjct: 341  RDQYNLQDFQTEYENAKFYVIKSFSEDDIHKCIKYDVWASTPNGNKKLDAAFHDAEAKAN 400

Query: 855  ETGTGCPVFLFFSVNGSGQFLGLAEMNGPVDFEKNMDFWQQDKWNGFFHLKWHIIKDIPN 1034
            ETGT  P+FLFFSVNGSGQF+G+AEM G VDF K+MDFWQ DKWNGFF +KWHI+KDIPN
Sbjct: 401  ETGTKFPIFLFFSVNGSGQFVGVAEMVGQVDFNKDMDFWQLDKWNGFFPVKWHIVKDIPN 460

Query: 1035 NRLRHIILENNDNKPVTYTRDTQEVGLKQGLEMLSIFKTYPAMTSMLDDYKFYEDQEKSL 1214
            ++LRHI LE+N+N+ VTYTRDTQE+GLKQG+EML IFK Y A TSM DD+ FYE++EKSL
Sbjct: 461  SQLRHITLESNENRSVTYTRDTQEIGLKQGVEMLKIFKNYSARTSMFDDFNFYENREKSL 520

Query: 1215 QARKGSKEEPSNYDN--HKTEFLERDFEAGLRKAEEAPMTVRKVSEYTSLATLARNLSLS 1388
             AR+ SK  P +        + L +      RK EE   T R   +  SL  L +NLSLS
Sbjct: 521  HARRSSKPPPPSQMEIYGSGDDLPKHLHGEERKTEEPARTSRS-HDPKSLINLTKNLSLS 579


>emb|CAN72774.1| hypothetical protein VITISV_026284 [Vitis vinifera]
          Length = 812

 Score =  381 bits (978), Expect = e-103
 Identities = 197/370 (53%), Positives = 253/370 (68%), Gaps = 1/370 (0%)
 Frame = +3

Query: 138  NGTYKSYDHGRLSARDAAAALYSGPSSWLNSRYSNSLKTSATVDAKVSRVPLSSKSVIST 317
            NGT  ++ + +  +R  A+A          +    S+K + TV  K S +P  SKS  S 
Sbjct: 175  NGTNANFGNIKSGSRPTASA---------KANNFPSMKANGTVANKYS-LPFDSKSRXSA 224

Query: 318  HPSNLSNFSHQTQRYNSSDKVPQVSSDIQSAVINRDSYAARSFSLVSNQVQGLFP-NGAS 494
             PSN S    Q+Q     +K   + SD  +      +  ++ FS  +NQ QG FP NG  
Sbjct: 225  APSNFSKSIFQSQPLKPLNKASHLGSDFPAGFAKGFNPVSK-FSSFTNQKQGFFPHNGVM 283

Query: 495  SYQTNIGTWGGYDGYNLGEKFNRSSSFEAQKEATRGPRSRRVHNLMNLSDEKEQFGPRVR 674
            +Y+ N   W G + Y L EK NR+  FE+  E T GPR+R  ++ +N + EKE+ G  VR
Sbjct: 284  NYRPNSRAWNGNEKYKLREKSNRNGHFESSTELTCGPRARNRNSPLNSATEKEELGLMVR 343

Query: 675  RDRYNLPDFQISYDNAKFFVIKSYSEDDIQKSIKYDVWSSTPTGNKKLNAAFNDAQTRHS 854
            RD+YNL DFQ  Y+NAKF+VIKS+SEDDI K IKYDVW+STP GNKKL+AAF+DA+ + +
Sbjct: 344  RDQYNLQDFQTEYENAKFYVIKSFSEDDIHKCIKYDVWASTPNGNKKLDAAFHDAEAKAN 403

Query: 855  ETGTGCPVFLFFSVNGSGQFLGLAEMNGPVDFEKNMDFWQQDKWNGFFHLKWHIIKDIPN 1034
            ETGT  P+FLFFSVNGSGQF+G+AEM G VDF K+MDFWQ DKWNGFF +KWHI+KDIPN
Sbjct: 404  ETGTKFPIFLFFSVNGSGQFVGVAEMVGQVDFNKDMDFWQLDKWNGFFPVKWHIVKDIPN 463

Query: 1035 NRLRHIILENNDNKPVTYTRDTQEVGLKQGLEMLSIFKTYPAMTSMLDDYKFYEDQEKSL 1214
            ++LRHI LE+N+N+ VTYTRDTQE+GLKQG+EML IFK Y A TSM DD+ FYE++EKSL
Sbjct: 464  SQLRHITLESNENRSVTYTRDTQEIGLKQGVEMLKIFKNYSARTSMFDDFNFYENREKSL 523

Query: 1215 QARKGSKEEP 1244
             AR+ SK  P
Sbjct: 524  HARRSSKPPP 533


>ref|XP_002526452.1| yth domain-containing protein, putative [Ricinus communis]
            gi|223534232|gb|EEF35947.1| yth domain-containing
            protein, putative [Ricinus communis]
          Length = 582

 Score =  339 bits (869), Expect = 1e-90
 Identities = 204/442 (46%), Positives = 268/442 (60%), Gaps = 9/442 (2%)
 Frame = +3

Query: 126  YLRHNGTYKS-----YDHGRLSARDAA---AALYSGPSSWLNSRYSNSLKTSATVDAKVS 281
            YL+H  +Y S     Y      A D +   AA  +G      S   NS+K++  +  K S
Sbjct: 153  YLQHPVSYGSAAVPCYSWDSTYAGDVSNGSAAFGNGKYGSAKSNGLNSMKSNGNIGGKSS 212

Query: 282  RVPLSSKSVISTHPSNLSNFSHQTQRYNSSDKVPQVSSDIQSAVINRDSYAARSFSLVSN 461
            +                SN+    +  N   KV  + SD  SA + +  +   +FS  S 
Sbjct: 213  K----------------SNYMQPNRPLN---KVSPLGSDF-SAGLMKGYHHVGNFSSFSA 252

Query: 462  QVQG-LFPNGASSYQTNIGTWGGYDGYNLGEKFNRSSSFEAQKEATRGPRSRRVHNLMNL 638
              QG L  NG  +Y+ N   W G D     +KF +++ FEA  E T GPR+    + ++ 
Sbjct: 253  HKQGPLSHNGTMNYRQNGRMWNGNDRNRPRDKFYKTNDFEASSELTCGPRASNKISPLD- 311

Query: 639  SDEKEQFGPRVRRDRYNLPDFQISYDNAKFFVIKSYSEDDIQKSIKYDVWSSTPTGNKKL 818
            S  KE     V RD+YN  DF+  Y NAKF+VIKSY+EDDI KSIKY VW+STP GNKKL
Sbjct: 312  SSAKEDLAFTVCRDQYNQADFKTEYKNAKFYVIKSYNEDDIHKSIKYAVWASTPNGNKKL 371

Query: 819  NAAFNDAQTRHSETGTGCPVFLFFSVNGSGQFLGLAEMNGPVDFEKNMDFWQQDKWNGFF 998
            +AAF +A+ R SETGT CP+FLFFSVNGSGQF+GLAEM G VDFEK+MDFWQ DKW+GFF
Sbjct: 372  DAAFCEAEQRSSETGTKCPIFLFFSVNGSGQFVGLAEMVGQVDFEKDMDFWQLDKWSGFF 431

Query: 999  HLKWHIIKDIPNNRLRHIILENNDNKPVTYTRDTQEVGLKQGLEMLSIFKTYPAMTSMLD 1178
             +KWH+IKDIPNN+LRHIILENND +PVT++RDTQE+G +QGLEML+IFK Y +  S+LD
Sbjct: 432  PVKWHVIKDIPNNQLRHIILENNDKRPVTFSRDTQEIGFEQGLEMLNIFKGYSSKASLLD 491

Query: 1179 DYKFYEDQEKSLQARKGSKEEPSNYDNHKTEFLERDFEAGLRKAEEAPMTVRKVSEYTSL 1358
            D+ FYE++E S+  RK +K      + +      +  ++G RK EE   T +K S  +SL
Sbjct: 492  DFNFYENRETSVD-RKSNKLATLRMEINNNGDFPKHPKSGERKHEEESWT-KKTSNPSSL 549

Query: 1359 ATLARNLSLSPKSAIAGNSSRK 1424
              L +NLSL+  S    NS +K
Sbjct: 550  INLTKNLSLNGYSQ-KSNSIKK 570


>ref|XP_002328776.1| predicted protein [Populus trichocarpa] gi|222839074|gb|EEE77425.1|
            predicted protein [Populus trichocarpa]
          Length = 350

 Score =  337 bits (865), Expect = 4e-90
 Identities = 174/325 (53%), Positives = 223/325 (68%), Gaps = 10/325 (3%)
 Frame = +3

Query: 444  FSLVSNQVQGLFPN-GASSYQTNIGTWGGYDGYNLGEKFNRSSSFEAQKEATRGPRSR-- 614
            F   + Q QG FP+ G  +Y+ N+  W G       ++FNR+  FE Q E TRGPR+   
Sbjct: 4    FPPFTGQKQGPFPHSGPLNYRQNVRMWNGNYRNKPRDRFNRNGDFENQTELTRGPRASIK 63

Query: 615  ------RVHNLMNL-SDEKEQFGPRVRRDRYNLPDFQISYDNAKFFVIKSYSEDDIQKSI 773
                   V N   L S  K+  G  + +++YNLPDF+I Y NAKFFVIKSY+EDDI KSI
Sbjct: 64   NAPLDDSVKNNAPLDSSVKDMLGFAMHKEQYNLPDFEIEYSNAKFFVIKSYNEDDIHKSI 123

Query: 774  KYDVWSSTPTGNKKLNAAFNDAQTRHSETGTGCPVFLFFSVNGSGQFLGLAEMNGPVDFE 953
            KYDVW+STP GNKKL+AAF++A+   SETGT CP+FLFFSVNGSGQF+GLAEM G VDF 
Sbjct: 124  KYDVWASTPNGNKKLDAAFHNAEEVSSETGTKCPIFLFFSVNGSGQFVGLAEMVGQVDFN 183

Query: 954  KNMDFWQQDKWNGFFHLKWHIIKDIPNNRLRHIILENNDNKPVTYTRDTQEVGLKQGLEM 1133
            K+MDFWQ DKWNGFF +KWH+IKDIPN +LRHI+LENND   VT++RDTQE+GL++GLEM
Sbjct: 184  KDMDFWQIDKWNGFFPVKWHVIKDIPNGQLRHIVLENNDGHSVTFSRDTQEIGLEKGLEM 243

Query: 1134 LSIFKTYPAMTSMLDDYKFYEDQEKSLQARKGSKEEPSNYDNHKTEFLERDFEAGLRKAE 1313
            L+IFK+Y A TSMLDD+ FYE++EKSL  +K +K      +  +     +   A   K  
Sbjct: 244  LNIFKSYSAKTSMLDDFNFYENREKSLNTKKSNKPATLRMEIFENSDFPK-HTAAEEKIS 302

Query: 1314 EAPMTVRKVSEYTSLATLARNLSLS 1388
            E     +K +  ++L  L +NLSL+
Sbjct: 303  EDDSRAKKTTNPSTLINLTKNLSLN 327


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