BLASTX nr result

ID: Coptis21_contig00009895 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009895
         (1673 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529275.1| kinetochore protein nuf2, putative [Ricinus ...   152   1e-64
ref|XP_002269064.1| PREDICTED: kinetochore protein Nuf2 [Vitis v...   147   2e-64
ref|XP_002283312.1| PREDICTED: probable kinetochore protein NUF2...   148   2e-63
ref|XP_002309861.1| predicted protein [Populus trichocarpa] gi|2...   153   6e-61
emb|CAN82250.1| hypothetical protein VITISV_036492 [Vitis vinifera]   137   1e-59

>ref|XP_002529275.1| kinetochore protein nuf2, putative [Ricinus communis]
           gi|223531264|gb|EEF33107.1| kinetochore protein nuf2,
           putative [Ricinus communis]
          Length = 450

 Score =  152 bits (384), Expect(2) = 1e-64
 Identities = 80/157 (50%), Positives = 113/157 (71%)
 Frame = +1

Query: 1   DRTRVFISAILNFIFFRATKLDLIRPQVDKICVQKKKQAELEAKIAQLNMEIEQVQDERE 180
           DRT +++SAILNF   + TK++L+R   +++ +  +++ E E KI+QLN EI +    RE
Sbjct: 112 DRTELYLSAILNFCLHKDTKMNLLRSIGEELTLLDEQRKEWEDKISQLNAEIAEYNVARE 171

Query: 181 REKPFVSVLDAKVKELRRMILDLNNSQMSLKSSFRALREKTKEIDEKITTANFTLSQRAQ 360
            E PFV  +DAKVKELR+ + +LNN QMSL++S R L+EK  E+D +I+ A F L Q  Q
Sbjct: 172 MELPFVQEVDAKVKELRQTVSELNNHQMSLRASSRKLKEKAGELDGEISKAEFDLVQSVQ 231

Query: 361 ENAKLQSKIVQSPEKLQGCLEQKKLILDEMKNSERSA 471
           ENA L+SKIVQSP+KLQ  LE+KK + +E+KN+ER A
Sbjct: 232 ENANLRSKIVQSPDKLQRALEEKKSVWEEVKNAERLA 268



 Score =  122 bits (306), Expect(2) = 1e-64
 Identities = 67/144 (46%), Positives = 93/144 (64%)
 Frame = +2

Query: 575  MQAIQEQVTSXXXXXXXXXXXXXXXCNNSVLDKALEAKLVERQAKVEQLEESRKASEKER 754
            MQ I E+V S                N  +LDK L+AKLVERQAK +QL+E RK  EKE+
Sbjct: 296  MQEIHEEVNSAKSIEKDYKELKAKLSNEGMLDKKLDAKLVERQAKAQQLDELRKVLEKEK 355

Query: 755  DLKRDQAARLLNNVKLEVESKKRDMASWVKRVEAIMNEEVDIVNLKMNSVRESGSATQQE 934
            DLK + AAR  NNVK EVES++ D+ +  ++VE I++ EVD + LK N V+ESG+A  QE
Sbjct: 356  DLKCEDAAREFNNVKSEVESRRVDLEARQRKVEVIVS-EVDAITLKTNMVKESGAAKVQE 414

Query: 935  LLLKCKEIVNEFQNYSHATSEVLQ 1006
            L+ KC++I  +F+ Y ++   V+Q
Sbjct: 415  LVYKCEQIAEQFEQYRNSMGLVMQ 438


>ref|XP_002269064.1| PREDICTED: kinetochore protein Nuf2 [Vitis vinifera]
           gi|298204517|emb|CBI23792.3| unnamed protein product
           [Vitis vinifera]
          Length = 453

 Score =  147 bits (370), Expect(2) = 2e-64
 Identities = 77/157 (49%), Positives = 109/157 (69%)
 Frame = +1

Query: 1   DRTRVFISAILNFIFFRATKLDLIRPQVDKICVQKKKQAELEAKIAQLNMEIEQVQDERE 180
           DRT  F+  ILNF   + +K++ +RP V++  +  +++  LE +I+QL+ EI    + RE
Sbjct: 111 DRTEKFLGTILNFFLHKDSKMNELRPIVEESNLLDEERKLLEDRISQLDAEITDYNEARE 170

Query: 181 REKPFVSVLDAKVKELRRMILDLNNSQMSLKSSFRALREKTKEIDEKITTANFTLSQRAQ 360
           R  P V  ++ KVK+LR+ I  LNN QMSL++SFR ++EK  E+DEKI++A F L Q  Q
Sbjct: 171 RAMPLVQEIEVKVKDLRQAIPSLNNQQMSLRTSFRKMKEKVAEMDEKISSAEFALVQSVQ 230

Query: 361 ENAKLQSKIVQSPEKLQGCLEQKKLILDEMKNSERSA 471
           ENA L+SKIVQSP+KLQ  LE+KK +  E KN+ERSA
Sbjct: 231 ENANLRSKIVQSPDKLQRTLEEKKSVRVEAKNAERSA 267



 Score =  127 bits (318), Expect(2) = 2e-64
 Identities = 78/158 (49%), Positives = 101/158 (63%)
 Frame = +2

Query: 575  MQAIQEQVTSXXXXXXXXXXXXXXXCNNSVLDKALEAKLVERQAKVEQLEESRKASEKER 754
            MQAIQEQV S                   VLDK+ EAKL+ERQ KVEQL+E RK  EKER
Sbjct: 295  MQAIQEQVNSAKAIEKDLKVLKTKLSEEGVLDKSFEAKLLERQRKVEQLDELRKQLEKER 354

Query: 755  DLKRDQAARLLNNVKLEVESKKRDMASWVKRVEAIMNEEVDIVNLKMNSVRESGSATQQE 934
            + K ++AA+ LNNVKL VESK+R++ +  ++VEA    EVD   LK+NSV+ESG+A QQ+
Sbjct: 355  NFKCEEAAKELNNVKLAVESKRRELEARQRKVEA-EAAEVDATTLKINSVKESGAAKQQK 413

Query: 935  LLLKCKEIVNEFQNYSHATSEVLQRIVPGLESVDDSVG 1048
            L  K +EIV EF  Y+++   +L RI    E VD  +G
Sbjct: 414  LTRKGEEIVKEFHQYANSIGVLLPRIQVEPE-VDQDMG 450


>ref|XP_002283312.1| PREDICTED: probable kinetochore protein NUF2 [Vitis vinifera]
           gi|296082133|emb|CBI21138.3| unnamed protein product
           [Vitis vinifera]
          Length = 453

 Score =  148 bits (374), Expect(2) = 2e-63
 Identities = 75/157 (47%), Positives = 112/157 (71%)
 Frame = +1

Query: 1   DRTRVFISAILNFIFFRATKLDLIRPQVDKICVQKKKQAELEAKIAQLNMEIEQVQDERE 180
           DRT  F+  ILNF   + +K++ +RP V+++ +  +++ + + +I+QL+ EI    + RE
Sbjct: 111 DRTERFLGTILNFFLHKDSKMNDLRPIVEELTLLDEQRNQFKDRISQLDAEIADCSEARE 170

Query: 181 REKPFVSVLDAKVKELRRMILDLNNSQMSLKSSFRALREKTKEIDEKITTANFTLSQRAQ 360
           RE+P V  ++ KVKELR+ I  LNN QMSL++SFR ++EK  E+DEKI++A F L Q  Q
Sbjct: 171 RERPLVEEVEVKVKELRQTIPSLNNQQMSLRASFRKMKEKVTEMDEKISSAEFALVQSVQ 230

Query: 361 ENAKLQSKIVQSPEKLQGCLEQKKLILDEMKNSERSA 471
           ENA L+SKI+QSP+KLQ  LE+KK    E+KN+E+SA
Sbjct: 231 ENANLRSKIIQSPDKLQRALEEKKSDRIEVKNAEKSA 267



 Score =  122 bits (307), Expect(2) = 2e-63
 Identities = 72/146 (49%), Positives = 95/146 (65%)
 Frame = +2

Query: 575  MQAIQEQVTSXXXXXXXXXXXXXXXCNNSVLDKALEAKLVERQAKVEQLEESRKASEKER 754
            MQ IQEQV S                   VL+K+LEAKLVE Q KVEQL++ RK  EKER
Sbjct: 295  MQTIQEQVNSAKAIEKDLKVIKTKLSEEGVLEKSLEAKLVEWQGKVEQLDDLRKQLEKER 354

Query: 755  DLKRDQAARLLNNVKLEVESKKRDMASWVKRVEAIMNEEVDIVNLKMNSVRESGSATQQE 934
            D K ++AA+ LNNVKL VES + ++ +  K+VEA    EVD + LK+NSV+ESG+A QQE
Sbjct: 355  DFKCEEAAKELNNVKLAVESSRHELEARQKKVEA-QAAEVDGITLKINSVKESGAAKQQE 413

Query: 935  LLLKCKEIVNEFQNYSHATSEVLQRI 1012
            L+ K +EI+ EF  Y+++   +L RI
Sbjct: 414  LISKGEEIMKEFHLYANSIGVLLPRI 439


>ref|XP_002309861.1| predicted protein [Populus trichocarpa] gi|222852764|gb|EEE90311.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score =  153 bits (387), Expect(2) = 6e-61
 Identities = 79/157 (50%), Positives = 113/157 (71%)
 Frame = +1

Query: 1   DRTRVFISAILNFIFFRATKLDLIRPQVDKICVQKKKQAELEAKIAQLNMEIEQVQDERE 180
           DRT+ F+SAILNF   + +K++ +RP  +++ +  +++  LE KI+QLN EI +  D RE
Sbjct: 112 DRTQFFLSAILNFCLHKDSKMNELRPIGEELTLLDEQRRGLEDKISQLNAEIAEYNDARE 171

Query: 181 REKPFVSVLDAKVKELRRMILDLNNSQMSLKSSFRALREKTKEIDEKITTANFTLSQRAQ 360
           RE P    +D KVKELR+ I DLNN QMSL++S+R L+E++ E+D +I+ A F L Q  Q
Sbjct: 172 RELPLAQEVDGKVKELRQEIADLNNHQMSLRASYRKLKERSSEMDGEISRAEFDLVQSVQ 231

Query: 361 ENAKLQSKIVQSPEKLQGCLEQKKLILDEMKNSERSA 471
           ENA L+SKIVQSP+KLQ  LE+KK + +E +N+ER A
Sbjct: 232 ENANLRSKIVQSPDKLQRALEEKKSVREEARNAERLA 268



 Score =  109 bits (272), Expect(2) = 6e-61
 Identities = 60/144 (41%), Positives = 90/144 (62%)
 Frame = +2

Query: 575  MQAIQEQVTSXXXXXXXXXXXXXXXCNNSVLDKALEAKLVERQAKVEQLEESRKASEKER 754
            MQAI EQV S                ++ ++DK+L+AKLVE Q K +QL E +K  EKER
Sbjct: 296  MQAIHEQVNSAKSIEKDYKALKAKLSDDGLMDKSLDAKLVELQMKAQQLNELKKLLEKER 355

Query: 755  DLKRDQAARLLNNVKLEVESKKRDMASWVKRVEAIMNEEVDIVNLKMNSVRESGSATQQE 934
            D+K ++A +  N +K EVESK+ D+ +  +RVEA+++ EVD +  K N V ESG+A  Q+
Sbjct: 356  DMKCEEATKEYNTIKSEVESKRHDLEARQRRVEAVLS-EVDAITSKTNMVNESGAAKVQK 414

Query: 935  LLLKCKEIVNEFQNYSHATSEVLQ 1006
            L+ K +EI  +F+ Y ++   +LQ
Sbjct: 415  LVSKREEIAEQFKKYKNSIEPLLQ 438


>emb|CAN82250.1| hypothetical protein VITISV_036492 [Vitis vinifera]
          Length = 473

 Score =  137 bits (344), Expect(2) = 1e-59
 Identities = 75/177 (42%), Positives = 112/177 (63%), Gaps = 20/177 (11%)
 Frame = +1

Query: 1   DRTRVFISAILNFIFFRA--------------------TKLDLIRPQVDKICVQKKKQAE 120
           DRT  F+  ILNF   +                     +K++ +RP V+++ +  +++ +
Sbjct: 111 DRTERFLGTILNFFLHKKCKGISPKGPMTKTHKEETKDSKMNDLRPIVEELTLLDEQRNQ 170

Query: 121 LEAKIAQLNMEIEQVQDEREREKPFVSVLDAKVKELRRMILDLNNSQMSLKSSFRALREK 300
            + +I+QL+ EI    + RERE+P V  ++ KVKELR+ I  LNN QMSL++SFR ++EK
Sbjct: 171 FKDRISQLDAEIADCSEARERERPLVEEVEVKVKELRQTIPSLNNQQMSLRASFRKMKEK 230

Query: 301 TKEIDEKITTANFTLSQRAQENAKLQSKIVQSPEKLQGCLEQKKLILDEMKNSERSA 471
             E+DEKI++A F L Q  QENA L+SKI+QSP+KLQ  LE+KK    E+KN+E+SA
Sbjct: 231 VTEMDEKISSAEFALVQSVQENANLRSKIIQSPDKLQRALEEKKSDRIEVKNAEKSA 287



 Score =  121 bits (304), Expect(2) = 1e-59
 Identities = 72/146 (49%), Positives = 94/146 (64%)
 Frame = +2

Query: 575  MQAIQEQVTSXXXXXXXXXXXXXXXCNNSVLDKALEAKLVERQAKVEQLEESRKASEKER 754
            MQ IQEQV S                   VL K+LEAKLVE Q KVEQL++ RK  EKER
Sbjct: 315  MQTIQEQVNSAKAIEKDLKVIKTKLSEEGVLXKSLEAKLVEWQGKVEQLDDLRKQLEKER 374

Query: 755  DLKRDQAARLLNNVKLEVESKKRDMASWVKRVEAIMNEEVDIVNLKMNSVRESGSATQQE 934
            D K ++AA+ LNNVKL VES + ++ +  K+VEA    EVD + LK+NSV+ESG+A QQE
Sbjct: 375  DFKCEEAAKELNNVKLAVESSRHELEARQKKVEA-QAAEVDGITLKINSVKESGAAKQQE 433

Query: 935  LLLKCKEIVNEFQNYSHATSEVLQRI 1012
            L+ K +EI+ EF  Y+++   +L RI
Sbjct: 434  LISKGEEIMKEFHLYANSIGVLLPRI 459


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