BLASTX nr result

ID: Coptis21_contig00009894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009894
         (1505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530291.1| ubiquitin-protein ligase, putative [Ricinus ...   565   e-159
ref|XP_002282284.2| PREDICTED: F-box/kelch-repeat protein At5g60...   557   e-156
emb|CBI16301.3| unnamed protein product [Vitis vinifera]              557   e-156
ref|XP_003543480.1| PREDICTED: F-box/kelch-repeat protein At5g60...   551   e-154
ref|NP_001242021.1| uncharacterized protein LOC100820005 [Glycin...   543   e-152

>ref|XP_002530291.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223530189|gb|EEF32098.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 376

 Score =  565 bits (1457), Expect = e-159
 Identities = 263/353 (74%), Positives = 304/353 (86%)
 Frame = -2

Query: 1492 DGQEKRGAARFSDSLFPGLHDDIALNCLAWVPRSDYASLACLSNRFKMLVKSGYLHGLRK 1313
            DG+ + G+   SDSL PGL DD+ALNCLAW  RSDYASLAC++ RF  L++SGYL+GLRK
Sbjct: 21   DGRLRLGS---SDSLLPGLIDDVALNCLAWACRSDYASLACINKRFHKLIESGYLYGLRK 77

Query: 1312 QMGIAEHWVYLVFDLKGWEAFDPTVKRWMKLPKIPCDDCFNHADKESLAVGNELLVFGRE 1133
            Q+GI EHWVYLV D +GWEAFDP  K+WM LPKIPCD+CFNHADKESLAVG+ELLVFGRE
Sbjct: 78   QLGITEHWVYLVCDPRGWEAFDPVRKKWMALPKIPCDECFNHADKESLAVGSELLVFGRE 137

Query: 1132 LYDLAIWKYNLAHQNWVKCQGLNRPRCLFGSSSFGSVAIVAGGVDRKGTVLRSAELYNSD 953
            L+D AIWKY+L  + WVKC+G+NRPRCLFGS S GS+A+VAGG D+ G VL SAELY+S 
Sbjct: 138  LFDFAIWKYSLIRRGWVKCEGMNRPRCLFGSGSLGSIAVVAGGSDKNGNVLNSAELYDSS 197

Query: 952  SGCWELLPSMHSPRKLCSGFFMDGKFYVIGGVASATDSLSCGEEYNLQTRTWRKIEGMYT 773
            +G WE+LP+MHSPR+LCSGFFMDGKFYVIGG++S T SL+CGEEY+ +TR WR IEGMY 
Sbjct: 198  TGKWEMLPNMHSPRRLCSGFFMDGKFYVIGGMSSPTVSLTCGEEYDFETRKWRMIEGMYP 257

Query: 772  IENKAAQAPPLVAVVDNQLYAVEHLKNIVKKYDKENNCWNELGRLPVRADSSNGWGLAFK 593
              N+AAQAPPLVAVVDNQLYAVE+L N+VKKYDK  N W  LGRLPVRADSSNGWGLAFK
Sbjct: 258  NVNRAAQAPPLVAVVDNQLYAVEYLTNMVKKYDKVKNTWEVLGRLPVRADSSNGWGLAFK 317

Query: 592  ACGKQLLVVGGQKGPEGEAIVLNSWCPSSGVVDGALEWKVLGKKESVGVFVYN 434
            ACG++LLVVGGQ+GPEGEA+VLNSWCP SGV +G L+WKVLG KE VGVFVYN
Sbjct: 318  ACGEKLLVVGGQRGPEGEAVVLNSWCPKSGVNNGTLDWKVLGVKEHVGVFVYN 370


>ref|XP_002282284.2| PREDICTED: F-box/kelch-repeat protein At5g60570-like [Vitis vinifera]
          Length = 416

 Score =  557 bits (1436), Expect = e-156
 Identities = 262/347 (75%), Positives = 297/347 (85%)
 Frame = -2

Query: 1474 GAARFSDSLFPGLHDDIALNCLAWVPRSDYASLACLSNRFKMLVKSGYLHGLRKQMGIAE 1295
            G    + SL PGL DD+AL CLA   RSDYASL+CL+ RF  L+KSG L+G RK +GIAE
Sbjct: 64   GQIETNGSLLPGLCDDVALKCLALACRSDYASLSCLNTRFNKLIKSGNLYGERKVLGIAE 123

Query: 1294 HWVYLVFDLKGWEAFDPTVKRWMKLPKIPCDDCFNHADKESLAVGNELLVFGRELYDLAI 1115
            HWVYLV DL+GWEAFD   K+WMKLPKIPCD+CFNHADKESLAVG+ELLVFGRE YD AI
Sbjct: 124  HWVYLVCDLRGWEAFDAMRKKWMKLPKIPCDECFNHADKESLAVGSELLVFGREFYDFAI 183

Query: 1114 WKYNLAHQNWVKCQGLNRPRCLFGSSSFGSVAIVAGGVDRKGTVLRSAELYNSDSGCWEL 935
            WKY+L   NW+KCQG+N PRCLFGSSS GS+AIVAGG D+ G VL+SAELY+S SG WE+
Sbjct: 184  WKYSLVRGNWIKCQGMNLPRCLFGSSSLGSIAIVAGGSDKSGNVLKSAELYDSSSGRWEM 243

Query: 934  LPSMHSPRKLCSGFFMDGKFYVIGGVASATDSLSCGEEYNLQTRTWRKIEGMYTIENKAA 755
            LP+MHSPR+LCSGFFMDGKFYVIGG+ S TDSL+CGEE++L+TR WRKIEGMY   N+AA
Sbjct: 244  LPNMHSPRRLCSGFFMDGKFYVIGGMTSPTDSLTCGEEFDLKTREWRKIEGMYPNVNRAA 303

Query: 754  QAPPLVAVVDNQLYAVEHLKNIVKKYDKENNCWNELGRLPVRADSSNGWGLAFKACGKQL 575
            QAPPLVAVVDNQLYAVE+L N+VKKYDKE N W+ LGRLPVRAD SNGWGLAFKACG+QL
Sbjct: 304  QAPPLVAVVDNQLYAVEYLTNMVKKYDKEKNTWDVLGRLPVRADLSNGWGLAFKACGEQL 363

Query: 574  LVVGGQKGPEGEAIVLNSWCPSSGVVDGALEWKVLGKKESVGVFVYN 434
            LVVGGQ+GPEGEA+VLNSW P SGV DG L+WKV+G KE VGVFVYN
Sbjct: 364  LVVGGQRGPEGEAVVLNSWHPKSGVKDGTLDWKVIGVKEHVGVFVYN 410


>emb|CBI16301.3| unnamed protein product [Vitis vinifera]
          Length = 364

 Score =  557 bits (1436), Expect = e-156
 Identities = 262/347 (75%), Positives = 297/347 (85%)
 Frame = -2

Query: 1474 GAARFSDSLFPGLHDDIALNCLAWVPRSDYASLACLSNRFKMLVKSGYLHGLRKQMGIAE 1295
            G    + SL PGL DD+AL CLA   RSDYASL+CL+ RF  L+KSG L+G RK +GIAE
Sbjct: 12   GQIETNGSLLPGLCDDVALKCLALACRSDYASLSCLNTRFNKLIKSGNLYGERKVLGIAE 71

Query: 1294 HWVYLVFDLKGWEAFDPTVKRWMKLPKIPCDDCFNHADKESLAVGNELLVFGRELYDLAI 1115
            HWVYLV DL+GWEAFD   K+WMKLPKIPCD+CFNHADKESLAVG+ELLVFGRE YD AI
Sbjct: 72   HWVYLVCDLRGWEAFDAMRKKWMKLPKIPCDECFNHADKESLAVGSELLVFGREFYDFAI 131

Query: 1114 WKYNLAHQNWVKCQGLNRPRCLFGSSSFGSVAIVAGGVDRKGTVLRSAELYNSDSGCWEL 935
            WKY+L   NW+KCQG+N PRCLFGSSS GS+AIVAGG D+ G VL+SAELY+S SG WE+
Sbjct: 132  WKYSLVRGNWIKCQGMNLPRCLFGSSSLGSIAIVAGGSDKSGNVLKSAELYDSSSGRWEM 191

Query: 934  LPSMHSPRKLCSGFFMDGKFYVIGGVASATDSLSCGEEYNLQTRTWRKIEGMYTIENKAA 755
            LP+MHSPR+LCSGFFMDGKFYVIGG+ S TDSL+CGEE++L+TR WRKIEGMY   N+AA
Sbjct: 192  LPNMHSPRRLCSGFFMDGKFYVIGGMTSPTDSLTCGEEFDLKTREWRKIEGMYPNVNRAA 251

Query: 754  QAPPLVAVVDNQLYAVEHLKNIVKKYDKENNCWNELGRLPVRADSSNGWGLAFKACGKQL 575
            QAPPLVAVVDNQLYAVE+L N+VKKYDKE N W+ LGRLPVRAD SNGWGLAFKACG+QL
Sbjct: 252  QAPPLVAVVDNQLYAVEYLTNMVKKYDKEKNTWDVLGRLPVRADLSNGWGLAFKACGEQL 311

Query: 574  LVVGGQKGPEGEAIVLNSWCPSSGVVDGALEWKVLGKKESVGVFVYN 434
            LVVGGQ+GPEGEA+VLNSW P SGV DG L+WKV+G KE VGVFVYN
Sbjct: 312  LVVGGQRGPEGEAVVLNSWHPKSGVKDGTLDWKVIGVKEHVGVFVYN 358


>ref|XP_003543480.1| PREDICTED: F-box/kelch-repeat protein At5g60570-like [Glycine max]
          Length = 389

 Score =  551 bits (1419), Expect = e-154
 Identities = 254/342 (74%), Positives = 295/342 (86%)
 Frame = -2

Query: 1459 SDSLFPGLHDDIALNCLAWVPRSDYASLACLSNRFKMLVKSGYLHGLRKQMGIAEHWVYL 1280
            +DSL PGL DD+ALNCLAWV  SDYA L+C++ RF  L+ SGYL+GLRKQ+G  EH VY+
Sbjct: 42   NDSLIPGLIDDVALNCLAWVSGSDYAVLSCINKRFNKLINSGYLYGLRKQLGAVEHLVYM 101

Query: 1279 VFDLKGWEAFDPTVKRWMKLPKIPCDDCFNHADKESLAVGNELLVFGRELYDLAIWKYNL 1100
            V D +GW AFDP + RW+ LPKIPCD+CFNHADKESLAVG ELLVFGREL + AIWKY++
Sbjct: 102  VCDPRGWVAFDPKINRWISLPKIPCDECFNHADKESLAVGCELLVFGRELMEFAIWKYSM 161

Query: 1099 AHQNWVKCQGLNRPRCLFGSSSFGSVAIVAGGVDRKGTVLRSAELYNSDSGCWELLPSMH 920
              + WVKCQ +N+PRCLFGSSS GS+AIVAGG D+ G VL+SAELY+S +G WELLP+MH
Sbjct: 162  ICRGWVKCQEMNQPRCLFGSSSLGSIAIVAGGSDKYGNVLKSAELYDSSTGMWELLPNMH 221

Query: 919  SPRKLCSGFFMDGKFYVIGGVASATDSLSCGEEYNLQTRTWRKIEGMYTIENKAAQAPPL 740
            +PR+LCSGFFMDGKFYVIGG++S T SLSCGEEY+L+TR+WRKIEGMY   N   QAPPL
Sbjct: 222  APRRLCSGFFMDGKFYVIGGMSSTTVSLSCGEEYDLKTRSWRKIEGMYPYVNVGVQAPPL 281

Query: 739  VAVVDNQLYAVEHLKNIVKKYDKENNCWNELGRLPVRADSSNGWGLAFKACGKQLLVVGG 560
            VAVVDNQLYAVEHL N+VKKYDKE N WNELGRLPVRADSSNGWGLAFKACG+QLLVVGG
Sbjct: 282  VAVVDNQLYAVEHLTNMVKKYDKERNTWNELGRLPVRADSSNGWGLAFKACGEQLLVVGG 341

Query: 559  QKGPEGEAIVLNSWCPSSGVVDGALEWKVLGKKESVGVFVYN 434
            Q+GPEGEAIVL+SWCP SG+ +G ++W+VLG KE VGVFVYN
Sbjct: 342  QRGPEGEAIVLSSWCPKSGISNGTIDWQVLGVKEHVGVFVYN 383


>ref|NP_001242021.1| uncharacterized protein LOC100820005 [Glycine max]
            gi|255641445|gb|ACU20998.1| unknown [Glycine max]
          Length = 364

 Score =  543 bits (1399), Expect = e-152
 Identities = 250/342 (73%), Positives = 292/342 (85%)
 Frame = -2

Query: 1459 SDSLFPGLHDDIALNCLAWVPRSDYASLACLSNRFKMLVKSGYLHGLRKQMGIAEHWVYL 1280
            +DSL PGL DD+ALNCLAWV  SDYA+L+C++ RF  L+ SGYL+GLRKQ+G  EH VY+
Sbjct: 17   NDSLLPGLIDDVALNCLAWVSGSDYAALSCINKRFNKLIHSGYLYGLRKQLGAVEHLVYM 76

Query: 1279 VFDLKGWEAFDPTVKRWMKLPKIPCDDCFNHADKESLAVGNELLVFGRELYDLAIWKYNL 1100
            V D +GW AFDP + RWM LPKIPCD+CFNHADKESLAVG ELLVFGREL + AIWKY++
Sbjct: 77   VCDPRGWVAFDPKINRWMSLPKIPCDECFNHADKESLAVGCELLVFGRELMEFAIWKYSM 136

Query: 1099 AHQNWVKCQGLNRPRCLFGSSSFGSVAIVAGGVDRKGTVLRSAELYNSDSGCWELLPSMH 920
              + WVKCQ +N+PRCLFGSSS GS+AIVAGG D+ G VL+SAELY+S +G WE LP+MH
Sbjct: 137  ICRGWVKCQEMNQPRCLFGSSSLGSIAIVAGGSDKYGNVLKSAELYDSSTGMWEPLPNMH 196

Query: 919  SPRKLCSGFFMDGKFYVIGGVASATDSLSCGEEYNLQTRTWRKIEGMYTIENKAAQAPPL 740
            + R+LCSGFFMDGKFYVIGG++S T SLSCGEEY+L+TR+WRKIEGMY   N   QAPPL
Sbjct: 197  TSRRLCSGFFMDGKFYVIGGMSSTTVSLSCGEEYDLKTRSWRKIEGMYPYVNVGVQAPPL 256

Query: 739  VAVVDNQLYAVEHLKNIVKKYDKENNCWNELGRLPVRADSSNGWGLAFKACGKQLLVVGG 560
            VAVVDNQLYAVEHL N+ KKYDKE N WNELGRLPVRADSSNGWGLAFK CG+QLLVVGG
Sbjct: 257  VAVVDNQLYAVEHLTNMAKKYDKEKNTWNELGRLPVRADSSNGWGLAFKVCGEQLLVVGG 316

Query: 559  QKGPEGEAIVLNSWCPSSGVVDGALEWKVLGKKESVGVFVYN 434
            Q+GPEGE+IVL+SWCP SG+ +G ++W+VLG KE VGVFVYN
Sbjct: 317  QRGPEGESIVLSSWCPKSGISNGTIDWQVLGVKEHVGVFVYN 358


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