BLASTX nr result
ID: Coptis21_contig00009869
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00009869 (588 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002300788.1| predicted protein [Populus trichocarpa] gi|2... 177 1e-42 ref|XP_002263239.1| PREDICTED: F-box/kelch-repeat protein OR23-l... 174 8e-42 ref|XP_002521014.1| conserved hypothetical protein [Ricinus comm... 174 8e-42 emb|CAN79913.1| hypothetical protein VITISV_027398 [Vitis vinifera] 174 8e-42 ref|XP_002307636.1| predicted protein [Populus trichocarpa] gi|2... 174 1e-41 >ref|XP_002300788.1| predicted protein [Populus trichocarpa] gi|222842514|gb|EEE80061.1| predicted protein [Populus trichocarpa] Length = 414 Score = 177 bits (449), Expect = 1e-42 Identities = 92/175 (52%), Positives = 110/175 (62%), Gaps = 4/175 (2%) Frame = -3 Query: 514 IPNLPNDXXXXXXXXXXXSHHSRLKPTCKSWKHFFSSKP--LRQKNFSQFHSHLLCLFPQ 341 IP LPND SHH+R+KPTCKSW F SS + + +HLL +FPQ Sbjct: 21 IPGLPNDIASLILSLIPYSHHARVKPTCKSWHTFLSSTEALFSLRRHPRRSNHLLIIFPQ 80 Query: 340 DPSISPPFLFDPKNLAWRPIPPMPCNSQLYGLTNFISIALNSDLYVIGGSLFDARSFPMD 161 DPSIS P+LFDP+NLAWRP+P MPCN +YGL NF SI++ +LYV+GGSLFD RSFPMD Sbjct: 81 DPSISAPYLFDPQNLAWRPLPRMPCNPNVYGLCNFTSISMGPNLYVLGGSLFDTRSFPMD 140 Query: 160 RPSASGSIYRFDMFTNEWVCLSPMLSARGSF--XXXXXXXXXXXXXXGSRHAMFG 2 RPS + S++RF+ W L PMLS RGSF GSRHA FG Sbjct: 141 RPSPTSSVFRFNFVDFLWEKLCPMLSPRGSFACAAVPDSGQIIVAGGGSRHAWFG 195 >ref|XP_002263239.1| PREDICTED: F-box/kelch-repeat protein OR23-like [Vitis vinifera] Length = 429 Score = 174 bits (442), Expect = 8e-42 Identities = 93/173 (53%), Positives = 107/173 (61%), Gaps = 2/173 (1%) Frame = -3 Query: 514 IPNLPNDXXXXXXXXXXXSHHSRLKPTCKSWKHFFSSKPLRQKNFSQFHSHLLCLFPQDP 335 IP LPND S +RLK KSWK F SSK L + S LLCLFPQDP Sbjct: 39 IPGLPNDVSALILSMIPYSCLARLKSISKSWKLFLSSKTLISLRQNNHQSQLLCLFPQDP 98 Query: 334 SISPPFLFDPKNLAWRPIPPMPCNSQLYGLTNFISIALNSDLYVIGGSLFDARSFPMDRP 155 +I+ PFLFDPK LAW P+PP+P N +YGL NF SI+L +LYV+GGSLFD RSFP+DRP Sbjct: 99 AIANPFLFDPKTLAWCPLPPLPINPYVYGLCNFTSISLGPNLYVLGGSLFDTRSFPLDRP 158 Query: 154 SASGSIYRFDMFTNEWVCLSPMLSARGSF--XXXXXXXXXXXXXXGSRHAMFG 2 S S S++RF+ T W LSPMLS RGSF GSRH MFG Sbjct: 159 SPSSSVFRFNFLTYSWELLSPMLSPRGSFACVALPNSDQIIVAGGGSRHTMFG 211 >ref|XP_002521014.1| conserved hypothetical protein [Ricinus communis] gi|223539851|gb|EEF41431.1| conserved hypothetical protein [Ricinus communis] Length = 428 Score = 174 bits (442), Expect = 8e-42 Identities = 92/174 (52%), Positives = 109/174 (62%), Gaps = 3/174 (1%) Frame = -3 Query: 514 IPNLPNDXXXXXXXXXXXSHHSRLKPTCKSWKHFFSSKPLRQKNFSQFH-SHLLCLFPQD 338 IP LPND SHHSR+K T KSW F SSK L + +HLL +FPQD Sbjct: 27 IPGLPNDVAAQILSTVPYSHHSRIKQTSKSWYTFLSSKTLVSLRQHLLNLNHLLVIFPQD 86 Query: 337 PSISPPFLFDPKNLAWRPIPPMPCNSQLYGLTNFISIALNSDLYVIGGSLFDARSFPMDR 158 PSIS P+LFDPKNLAW+P+ PMPCN +YGL NF SI+L LYV+GGS FD RSFPMDR Sbjct: 87 PSISSPYLFDPKNLAWKPLLPMPCNPHVYGLCNFTSISLGPTLYVLGGSHFDTRSFPMDR 146 Query: 157 PSASGSIYRFDMFTNEWVCLSPMLSARGSF--XXXXXXXXXXXXXXGSRHAMFG 2 P+ S S++R++ + W LSPMLS RGSF GSRH +FG Sbjct: 147 PTPSSSVFRYNFIDSRWDQLSPMLSPRGSFACIAVPNSGKIIVAGGGSRHTLFG 200 >emb|CAN79913.1| hypothetical protein VITISV_027398 [Vitis vinifera] Length = 517 Score = 174 bits (442), Expect = 8e-42 Identities = 93/173 (53%), Positives = 107/173 (61%), Gaps = 2/173 (1%) Frame = -3 Query: 514 IPNLPNDXXXXXXXXXXXSHHSRLKPTCKSWKHFFSSKPLRQKNFSQFHSHLLCLFPQDP 335 IP LPND S +RLK KSWK F SSK L + S LLCLFPQDP Sbjct: 43 IPGLPNDVSALILSMIPYSCLARLKSISKSWKLFLSSKTLISLRQNNHQSQLLCLFPQDP 102 Query: 334 SISPPFLFDPKNLAWRPIPPMPCNSQLYGLTNFISIALNSDLYVIGGSLFDARSFPMDRP 155 +I+ PFLFDPK LAW P+PP+P N +YGL NF SI+L +LYV+GGSLFD RSFP+DRP Sbjct: 103 AIANPFLFDPKTLAWCPLPPLPINPYVYGLCNFTSISLGPNLYVLGGSLFDTRSFPLDRP 162 Query: 154 SASGSIYRFDMFTNEWVCLSPMLSARGSF--XXXXXXXXXXXXXXGSRHAMFG 2 S S S++RF+ T W LSPMLS RGSF GSRH MFG Sbjct: 163 SPSSSVFRFNFLTYSWELLSPMLSPRGSFACVALPNSDQIIVAGGGSRHTMFG 215 >ref|XP_002307636.1| predicted protein [Populus trichocarpa] gi|222857085|gb|EEE94632.1| predicted protein [Populus trichocarpa] Length = 422 Score = 174 bits (441), Expect = 1e-41 Identities = 85/151 (56%), Positives = 105/151 (69%), Gaps = 2/151 (1%) Frame = -3 Query: 514 IPNLPNDXXXXXXXXXXXSHHSRLKPTCKSWKHFFSS-KPLRQKNFSQFHS-HLLCLFPQ 341 IP +PND SHHSR+KPTCKSW F SS K L + HS HLL +FPQ Sbjct: 20 IPGIPNDIASQILSMIPYSHHSRIKPTCKSWHIFLSSTKTLFLLRHNLRHSNHLLIIFPQ 79 Query: 340 DPSISPPFLFDPKNLAWRPIPPMPCNSQLYGLTNFISIALNSDLYVIGGSLFDARSFPMD 161 DP IS P+LFDP+NLAWRP+PPMPCN +YGL NF S+++ +LYV+GGSLFD RS+P+D Sbjct: 80 DPFISLPYLFDPQNLAWRPLPPMPCNPHVYGLCNFTSVSMGPNLYVLGGSLFDTRSYPID 139 Query: 160 RPSASGSIYRFDMFTNEWVCLSPMLSARGSF 68 RPS + S++RF+ W L PM+S RGSF Sbjct: 140 RPSPTSSVFRFNFVDFLWEKLCPMISPRGSF 170