BLASTX nr result

ID: Coptis21_contig00009869 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009869
         (588 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300788.1| predicted protein [Populus trichocarpa] gi|2...   177   1e-42
ref|XP_002263239.1| PREDICTED: F-box/kelch-repeat protein OR23-l...   174   8e-42
ref|XP_002521014.1| conserved hypothetical protein [Ricinus comm...   174   8e-42
emb|CAN79913.1| hypothetical protein VITISV_027398 [Vitis vinifera]   174   8e-42
ref|XP_002307636.1| predicted protein [Populus trichocarpa] gi|2...   174   1e-41

>ref|XP_002300788.1| predicted protein [Populus trichocarpa] gi|222842514|gb|EEE80061.1|
           predicted protein [Populus trichocarpa]
          Length = 414

 Score =  177 bits (449), Expect = 1e-42
 Identities = 92/175 (52%), Positives = 110/175 (62%), Gaps = 4/175 (2%)
 Frame = -3

Query: 514 IPNLPNDXXXXXXXXXXXSHHSRLKPTCKSWKHFFSSKP--LRQKNFSQFHSHLLCLFPQ 341
           IP LPND           SHH+R+KPTCKSW  F SS       +   +  +HLL +FPQ
Sbjct: 21  IPGLPNDIASLILSLIPYSHHARVKPTCKSWHTFLSSTEALFSLRRHPRRSNHLLIIFPQ 80

Query: 340 DPSISPPFLFDPKNLAWRPIPPMPCNSQLYGLTNFISIALNSDLYVIGGSLFDARSFPMD 161
           DPSIS P+LFDP+NLAWRP+P MPCN  +YGL NF SI++  +LYV+GGSLFD RSFPMD
Sbjct: 81  DPSISAPYLFDPQNLAWRPLPRMPCNPNVYGLCNFTSISMGPNLYVLGGSLFDTRSFPMD 140

Query: 160 RPSASGSIYRFDMFTNEWVCLSPMLSARGSF--XXXXXXXXXXXXXXGSRHAMFG 2
           RPS + S++RF+     W  L PMLS RGSF                GSRHA FG
Sbjct: 141 RPSPTSSVFRFNFVDFLWEKLCPMLSPRGSFACAAVPDSGQIIVAGGGSRHAWFG 195


>ref|XP_002263239.1| PREDICTED: F-box/kelch-repeat protein OR23-like [Vitis vinifera]
          Length = 429

 Score =  174 bits (442), Expect = 8e-42
 Identities = 93/173 (53%), Positives = 107/173 (61%), Gaps = 2/173 (1%)
 Frame = -3

Query: 514 IPNLPNDXXXXXXXXXXXSHHSRLKPTCKSWKHFFSSKPLRQKNFSQFHSHLLCLFPQDP 335
           IP LPND           S  +RLK   KSWK F SSK L     +   S LLCLFPQDP
Sbjct: 39  IPGLPNDVSALILSMIPYSCLARLKSISKSWKLFLSSKTLISLRQNNHQSQLLCLFPQDP 98

Query: 334 SISPPFLFDPKNLAWRPIPPMPCNSQLYGLTNFISIALNSDLYVIGGSLFDARSFPMDRP 155
           +I+ PFLFDPK LAW P+PP+P N  +YGL NF SI+L  +LYV+GGSLFD RSFP+DRP
Sbjct: 99  AIANPFLFDPKTLAWCPLPPLPINPYVYGLCNFTSISLGPNLYVLGGSLFDTRSFPLDRP 158

Query: 154 SASGSIYRFDMFTNEWVCLSPMLSARGSF--XXXXXXXXXXXXXXGSRHAMFG 2
           S S S++RF+  T  W  LSPMLS RGSF                GSRH MFG
Sbjct: 159 SPSSSVFRFNFLTYSWELLSPMLSPRGSFACVALPNSDQIIVAGGGSRHTMFG 211


>ref|XP_002521014.1| conserved hypothetical protein [Ricinus communis]
           gi|223539851|gb|EEF41431.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 428

 Score =  174 bits (442), Expect = 8e-42
 Identities = 92/174 (52%), Positives = 109/174 (62%), Gaps = 3/174 (1%)
 Frame = -3

Query: 514 IPNLPNDXXXXXXXXXXXSHHSRLKPTCKSWKHFFSSKPLRQKNFSQFH-SHLLCLFPQD 338
           IP LPND           SHHSR+K T KSW  F SSK L        + +HLL +FPQD
Sbjct: 27  IPGLPNDVAAQILSTVPYSHHSRIKQTSKSWYTFLSSKTLVSLRQHLLNLNHLLVIFPQD 86

Query: 337 PSISPPFLFDPKNLAWRPIPPMPCNSQLYGLTNFISIALNSDLYVIGGSLFDARSFPMDR 158
           PSIS P+LFDPKNLAW+P+ PMPCN  +YGL NF SI+L   LYV+GGS FD RSFPMDR
Sbjct: 87  PSISSPYLFDPKNLAWKPLLPMPCNPHVYGLCNFTSISLGPTLYVLGGSHFDTRSFPMDR 146

Query: 157 PSASGSIYRFDMFTNEWVCLSPMLSARGSF--XXXXXXXXXXXXXXGSRHAMFG 2
           P+ S S++R++   + W  LSPMLS RGSF                GSRH +FG
Sbjct: 147 PTPSSSVFRYNFIDSRWDQLSPMLSPRGSFACIAVPNSGKIIVAGGGSRHTLFG 200


>emb|CAN79913.1| hypothetical protein VITISV_027398 [Vitis vinifera]
          Length = 517

 Score =  174 bits (442), Expect = 8e-42
 Identities = 93/173 (53%), Positives = 107/173 (61%), Gaps = 2/173 (1%)
 Frame = -3

Query: 514 IPNLPNDXXXXXXXXXXXSHHSRLKPTCKSWKHFFSSKPLRQKNFSQFHSHLLCLFPQDP 335
           IP LPND           S  +RLK   KSWK F SSK L     +   S LLCLFPQDP
Sbjct: 43  IPGLPNDVSALILSMIPYSCLARLKSISKSWKLFLSSKTLISLRQNNHQSQLLCLFPQDP 102

Query: 334 SISPPFLFDPKNLAWRPIPPMPCNSQLYGLTNFISIALNSDLYVIGGSLFDARSFPMDRP 155
           +I+ PFLFDPK LAW P+PP+P N  +YGL NF SI+L  +LYV+GGSLFD RSFP+DRP
Sbjct: 103 AIANPFLFDPKTLAWCPLPPLPINPYVYGLCNFTSISLGPNLYVLGGSLFDTRSFPLDRP 162

Query: 154 SASGSIYRFDMFTNEWVCLSPMLSARGSF--XXXXXXXXXXXXXXGSRHAMFG 2
           S S S++RF+  T  W  LSPMLS RGSF                GSRH MFG
Sbjct: 163 SPSSSVFRFNFLTYSWELLSPMLSPRGSFACVALPNSDQIIVAGGGSRHTMFG 215


>ref|XP_002307636.1| predicted protein [Populus trichocarpa] gi|222857085|gb|EEE94632.1|
           predicted protein [Populus trichocarpa]
          Length = 422

 Score =  174 bits (441), Expect = 1e-41
 Identities = 85/151 (56%), Positives = 105/151 (69%), Gaps = 2/151 (1%)
 Frame = -3

Query: 514 IPNLPNDXXXXXXXXXXXSHHSRLKPTCKSWKHFFSS-KPLRQKNFSQFHS-HLLCLFPQ 341
           IP +PND           SHHSR+KPTCKSW  F SS K L     +  HS HLL +FPQ
Sbjct: 20  IPGIPNDIASQILSMIPYSHHSRIKPTCKSWHIFLSSTKTLFLLRHNLRHSNHLLIIFPQ 79

Query: 340 DPSISPPFLFDPKNLAWRPIPPMPCNSQLYGLTNFISIALNSDLYVIGGSLFDARSFPMD 161
           DP IS P+LFDP+NLAWRP+PPMPCN  +YGL NF S+++  +LYV+GGSLFD RS+P+D
Sbjct: 80  DPFISLPYLFDPQNLAWRPLPPMPCNPHVYGLCNFTSVSMGPNLYVLGGSLFDTRSYPID 139

Query: 160 RPSASGSIYRFDMFTNEWVCLSPMLSARGSF 68
           RPS + S++RF+     W  L PM+S RGSF
Sbjct: 140 RPSPTSSVFRFNFVDFLWEKLCPMISPRGSF 170


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