BLASTX nr result

ID: Coptis21_contig00009863 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009863
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527929.1| conserved hypothetical protein [Ricinus comm...   197   7e-49
ref|XP_002271910.2| PREDICTED: uncharacterized protein LOC100242...   196   2e-48
ref|XP_002312675.1| predicted protein [Populus trichocarpa] gi|2...   187   1e-45
emb|CBI18645.3| unnamed protein product [Vitis vinifera]              186   1e-45
emb|CAN65937.1| hypothetical protein VITISV_008966 [Vitis vinifera]   183   1e-44

>ref|XP_002527929.1| conserved hypothetical protein [Ricinus communis]
           gi|223532704|gb|EEF34486.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 498

 Score =  197 bits (501), Expect = 7e-49
 Identities = 92/163 (56%), Positives = 123/163 (75%)
 Frame = -1

Query: 489 SDVSVLIYPETVLMPDFMPALNFANKLDHDWLLIATPSIVPHLPFYLDEAARHWLQEDGK 310
           +D+SV + PETVLMPDF+  LN+A KLDHDWLL+A+   + +LPF+LD++ RHWL+EDG 
Sbjct: 87  TDISVFVNPETVLMPDFVSTLNYAYKLDHDWLLVASLHNLSYLPFHLDDSGRHWLREDGS 146

Query: 309 HIKLKKLQEFLVGKQKRSHCEERMLMAWNTGELPLHAGVLPPFLYGKGIYNQWVINEALS 130
            ++ +  +E L      +HC++RMLMAWN+  + LH GVLPPFLYGKG +N WVINEA+ 
Sbjct: 147 LMRPR--EEMLGQNWLWNHCDDRMLMAWNSKNIALHKGVLPPFLYGKGTHNYWVINEAVL 204

Query: 129 SDFRFVFDASGAISSFYPNELGHWPNQFLQGSDYEDTSKRGWE 1
           S+FRFVFDAS  ISSFY ++  +W N  ++GSD+ DTS R WE
Sbjct: 205 SEFRFVFDASWTISSFYLDDDVNWLNHSVKGSDFVDTSTRSWE 247


>ref|XP_002271910.2| PREDICTED: uncharacterized protein LOC100242526 [Vitis vinifera]
          Length = 874

 Score =  196 bits (497), Expect = 2e-48
 Identities = 92/169 (54%), Positives = 123/169 (72%)
 Frame = -1

Query: 507 RAQASHSDVSVLIYPETVLMPDFMPALNFANKLDHDWLLIATPSIVPHLPFYLDEAARHW 328
           R+ AS SD+SVL   ET+L+PDF+  L++A+KLD+DWLL A    V + PF LDEA +HW
Sbjct: 163 RSWASTSDISVLTDFETILLPDFISTLSYAHKLDYDWLLFAPLRSVFYFPFRLDEAGKHW 222

Query: 327 LQEDGKHIKLKKLQEFLVGKQKRSHCEERMLMAWNTGELPLHAGVLPPFLYGKGIYNQWV 148
           L++DGK I+ +K+QEFL    + +  E RMLMAWN   LPLH GVLPPFLYGKG++N WV
Sbjct: 223 LRKDGKRIRTQKMQEFLAQSWQWNCHEGRMLMAWNNRGLPLHTGVLPPFLYGKGLHNHWV 282

Query: 147 INEALSSDFRFVFDASGAISSFYPNELGHWPNQFLQGSDYEDTSKRGWE 1
           INEALSS+ RF+FDAS  I+SFY  +L  W ++ ++G ++ +   R WE
Sbjct: 283 INEALSSELRFIFDASWTITSFYLKDLDQWSDRLVEGYNFSNIKNRSWE 331


>ref|XP_002312675.1| predicted protein [Populus trichocarpa] gi|222852495|gb|EEE90042.1|
           predicted protein [Populus trichocarpa]
          Length = 552

 Score =  187 bits (474), Expect = 1e-45
 Identities = 85/163 (52%), Positives = 115/163 (70%)
 Frame = -1

Query: 489 SDVSVLIYPETVLMPDFMPALNFANKLDHDWLLIATPSIVPHLPFYLDEAARHWLQEDGK 310
           +D++V + P+TVL+PD +  LN+A+KLD DWLL+A+   V + PF+LD+A  HWL+EDG+
Sbjct: 10  TDIAVFVDPQTVLLPDLISTLNYAHKLDRDWLLVASLRNVSYFPFHLDDAGEHWLREDGQ 69

Query: 309 HIKLKKLQEFLVGKQKRSHCEERMLMAWNTGELPLHAGVLPPFLYGKGIYNQWVINEALS 130
            ++ ++LQE L    + +HCE+RMLMAWN   LPLH GVLPPFLYGKGI+N WV+NEA+S
Sbjct: 70  RVRRQELQEILGHHWEWNHCEDRMLMAWNNRNLPLHNGVLPPFLYGKGIHNHWVVNEAVS 129

Query: 129 SDFRFVFDASGAISSFYPNELGHWPNQFLQGSDYEDTSKRGWE 1
           S+ R VFDAS  IS    N   HW    ++GS   +   R WE
Sbjct: 130 SELRLVFDASWTISCLSLNYPEHWSELSVRGSSVLEIENRRWE 172


>emb|CBI18645.3| unnamed protein product [Vitis vinifera]
          Length = 677

 Score =  186 bits (473), Expect = 1e-45
 Identities = 91/169 (53%), Positives = 122/169 (72%)
 Frame = -1

Query: 507 RAQASHSDVSVLIYPETVLMPDFMPALNFANKLDHDWLLIATPSIVPHLPFYLDEAARHW 328
           R+ AS SD+SVL   ET+L+PDF+  L++A+KLD+DWLL A    V + PF LDEA +HW
Sbjct: 117 RSWASTSDISVLTDFETILLPDFISTLSYAHKLDYDWLLFAPLRSVFYFPFRLDEAGKHW 176

Query: 327 LQEDGKHIKLKKLQEFLVGKQKRSHCEERMLMAWNTGELPLHAGVLPPFLYGKGIYNQWV 148
           L++DGK I+ +K+QEFL    + +  E RMLMAWN   LPLH GVLPPFLYGKG++N WV
Sbjct: 177 LRKDGKRIRTQKMQEFLAQSWQWNCHEGRMLMAWNNRGLPLHTGVLPPFLYGKGLHNHWV 236

Query: 147 INEALSSDFRFVFDASGAISSFYPNELGHWPNQFLQGSDYEDTSKRGWE 1
           INEALSS+ RF+FDAS  I+SFY  +L  W ++ ++ +    +S R W+
Sbjct: 237 INEALSSELRFIFDASWTITSFYLKDLDQWSDRLVEVNYSNLSSLRLWK 285


>emb|CAN65937.1| hypothetical protein VITISV_008966 [Vitis vinifera]
          Length = 546

 Score =  183 bits (464), Expect = 1e-44
 Identities = 89/170 (52%), Positives = 120/170 (70%), Gaps = 1/170 (0%)
 Frame = -1

Query: 507 RAQASHSDVSVLIYPETVLMPDFMPALNFANKLDHDWLLIATPSIVPHLPFYLDEAARHW 328
           R+ AS SD+SVL   ET+L+PDF+  L++A+KLD+DWLL A    V + PF LDEA +HW
Sbjct: 4   RSWASTSDISVLTDFETILLPDFISTLSYAHKLDYDWLLFAHLRSVFYFPFRLDEAGKHW 63

Query: 327 LQEDGKHIKLKKLQEFLVGKQKRSHCEE-RMLMAWNTGELPLHAGVLPPFLYGKGIYNQW 151
           L++DGK I+ +K  ++        +C E RMLMAWN   LPLH GVLPPFLYGKG++N W
Sbjct: 64  LRKDGKRIRTQKSWQW--------NCHEGRMLMAWNNRGLPLHTGVLPPFLYGKGLHNHW 115

Query: 150 VINEALSSDFRFVFDASGAISSFYPNELGHWPNQFLQGSDYEDTSKRGWE 1
           VINEALSS+ RF+FDAS  I+SFY  +L  W ++ ++G ++ +   R WE
Sbjct: 116 VINEALSSELRFIFDASWTITSFYLKDLDQWSDRLVEGYNFXNIKNRSWE 165


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