BLASTX nr result

ID: Coptis21_contig00009727 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009727
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635184.1| PREDICTED: transcription factor bHLH123-like...   199   1e-49
ref|XP_002518591.1| transcription factor, putative [Ricinus comm...   189   2e-46
ref|XP_002280367.2| PREDICTED: transcription factor bHLH123-like...   181   7e-44
emb|CBI20463.3| unnamed protein product [Vitis vinifera]              181   7e-44
gb|AFK38358.1| unknown [Lotus japonicus]                              179   2e-43

>ref|XP_003635184.1| PREDICTED: transcription factor bHLH123-like [Vitis vinifera]
           gi|297735889|emb|CBI18658.3| unnamed protein product
           [Vitis vinifera]
          Length = 464

 Score =  199 bits (507), Expect = 1e-49
 Identities = 111/157 (70%), Positives = 124/157 (78%), Gaps = 1/157 (0%)
 Frame = -1

Query: 469 FIKTSPPKRQSNTSQLHFSNNTPPFLNASSNATNDARSSLSVSTQPQPQTSPFNEKRSNC 290
           ++K S PK+Q N S LHF+NNTP F NAS+ A ND R+S   S Q Q  T  F EK  NC
Sbjct: 255 YMKPSLPKQQPN-SHLHFTNNTP-FWNASAAALNDIRASFFPSPQSQFLTPTFEEK-PNC 311

Query: 289 SNFPGKFNSAEVQDSCSLVKKTS-EPTFKRPRIETPSPLPTFKVRKEKLGDRITALQQLV 113
           S    K N+ EV+DS S++KK+S EP FKRPRIETPSPLPTFKVRKEKLGDRITALQQLV
Sbjct: 312 SKLTTKLNTEEVRDSGSVLKKSSAEPAFKRPRIETPSPLPTFKVRKEKLGDRITALQQLV 371

Query: 112 SPFGKTDTASVLFEAIEYIKFLHEKVGVLSTPYMKNG 2
           SPFGKTDTASVL EAIEYIKFLH++V VLSTPYMKNG
Sbjct: 372 SPFGKTDTASVLHEAIEYIKFLHDQVSVLSTPYMKNG 408


>ref|XP_002518591.1| transcription factor, putative [Ricinus communis]
           gi|223542436|gb|EEF43978.1| transcription factor,
           putative [Ricinus communis]
          Length = 494

 Score =  189 bits (480), Expect = 2e-46
 Identities = 109/171 (63%), Positives = 126/171 (73%), Gaps = 8/171 (4%)
 Frame = -1

Query: 490 SPTFSN--QFIKTSPPKRQSNTSQ---LHFSNNTPPFLNASSNAT--NDARSSLSVSTQP 332
           SP++S    +I+ S PK+Q   +    LHFSNNTP F N S +AT  ND ++S   S   
Sbjct: 270 SPSWSKLAPYIRPSLPKQQQQPAAGGGLHFSNNTP-FWNPSGSATALNDIKASFVQSNNS 328

Query: 331 QPQ-TSPFNEKRSNCSNFPGKFNSAEVQDSCSLVKKTSEPTFKRPRIETPSPLPTFKVRK 155
           QPQ   P  E++ NC N   K N+ +V+DS S+VKK SEP  KR RIETPSPLPTFKVRK
Sbjct: 329 QPQYLMPTFEEKPNCPNVTLKPNNEQVRDSGSVVKKGSEPAIKRARIETPSPLPTFKVRK 388

Query: 154 EKLGDRITALQQLVSPFGKTDTASVLFEAIEYIKFLHEKVGVLSTPYMKNG 2
           EKLGDRITALQQLVSPFGKTDTASVL EAIEYIKFLH++V VLSTPYMKNG
Sbjct: 389 EKLGDRITALQQLVSPFGKTDTASVLHEAIEYIKFLHDQVSVLSTPYMKNG 439


>ref|XP_002280367.2| PREDICTED: transcription factor bHLH123-like [Vitis vinifera]
          Length = 361

 Score =  181 bits (458), Expect = 7e-44
 Identities = 104/159 (65%), Positives = 119/159 (74%), Gaps = 2/159 (1%)
 Frame = -1

Query: 472 QFIKTSPPKRQSNTSQLHFSNNTPPFLNASSNA-TNDARSSLSVSTQPQPQTSPFNEKRS 296
           QF++TSPPK+ S+T QLHFSNN P F NAS+ A   D+R S S + QPQ  T  FNEK  
Sbjct: 158 QFLRTSPPKQPSHT-QLHFSNNAP-FWNASAAAMAADSRPSFSPTLQPQFSTPTFNEKPK 215

Query: 295 NCSNFPGKFNSAEVQDSCSLVKKTSEPT-FKRPRIETPSPLPTFKVRKEKLGDRITALQQ 119
           N         S+E++D  S+ KK+S  T  KRPR ETPSPLP FKVRKEK+GDRITALQQ
Sbjct: 216 N---------SSEIRDISSVAKKSSGETGTKRPRSETPSPLPAFKVRKEKMGDRITALQQ 266

Query: 118 LVSPFGKTDTASVLFEAIEYIKFLHEKVGVLSTPYMKNG 2
           LVSPFGKTDTASVL EAIEYIKFLHE+V  LSTPYMK+G
Sbjct: 267 LVSPFGKTDTASVLSEAIEYIKFLHEQVSALSTPYMKSG 305


>emb|CBI20463.3| unnamed protein product [Vitis vinifera]
          Length = 384

 Score =  181 bits (458), Expect = 7e-44
 Identities = 104/159 (65%), Positives = 119/159 (74%), Gaps = 2/159 (1%)
 Frame = -1

Query: 472 QFIKTSPPKRQSNTSQLHFSNNTPPFLNASSNA-TNDARSSLSVSTQPQPQTSPFNEKRS 296
           QF++TSPPK+ S+T QLHFSNN P F NAS+ A   D+R S S + QPQ  T  FNEK  
Sbjct: 181 QFLRTSPPKQPSHT-QLHFSNNAP-FWNASAAAMAADSRPSFSPTLQPQFSTPTFNEKPK 238

Query: 295 NCSNFPGKFNSAEVQDSCSLVKKTSEPT-FKRPRIETPSPLPTFKVRKEKLGDRITALQQ 119
           N         S+E++D  S+ KK+S  T  KRPR ETPSPLP FKVRKEK+GDRITALQQ
Sbjct: 239 N---------SSEIRDISSVAKKSSGETGTKRPRSETPSPLPAFKVRKEKMGDRITALQQ 289

Query: 118 LVSPFGKTDTASVLFEAIEYIKFLHEKVGVLSTPYMKNG 2
           LVSPFGKTDTASVL EAIEYIKFLHE+V  LSTPYMK+G
Sbjct: 290 LVSPFGKTDTASVLSEAIEYIKFLHEQVSALSTPYMKSG 328


>gb|AFK38358.1| unknown [Lotus japonicus]
          Length = 444

 Score =  179 bits (455), Expect = 2e-43
 Identities = 102/165 (61%), Positives = 123/165 (74%), Gaps = 2/165 (1%)
 Frame = -1

Query: 490 SPTFSNQFIKTSPPKRQSNTSQLHFSNNTPPFLNASSNATNDARSSLSVSTQPQPQTSPF 311
           SPTFS+  +K + PK+Q   S LHFSN+TP F NAS+ A +D R+ +  S+Q Q QT  F
Sbjct: 227 SPTFSS-ILKPAMPKQQ--LSGLHFSNSTP-FWNASAEALHDIRAGVFASSQTQYQTPSF 282

Query: 310 NEKRSNCSNFPGKFNSAEVQDSCSLVKKTS--EPTFKRPRIETPSPLPTFKVRKEKLGDR 137
            EK+ N  +     N  + ++S    KK++  EP  KRPRIETPSPLPTFKVRKEKLGDR
Sbjct: 283 EEKKQNPPS--ALLNKLKREESPDAAKKSTSTEPALKRPRIETPSPLPTFKVRKEKLGDR 340

Query: 136 ITALQQLVSPFGKTDTASVLFEAIEYIKFLHEKVGVLSTPYMKNG 2
           ITALQQLVSPFGKTDTASVL EAI+YIKFLH++V VLSTPYMK+G
Sbjct: 341 ITALQQLVSPFGKTDTASVLHEAIDYIKFLHDQVNVLSTPYMKSG 385


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