BLASTX nr result
ID: Coptis21_contig00009724
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00009724 (385 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002520493.1| Transcription elongation factor B polypeptid... 174 9e-42 ref|XP_002282124.1| PREDICTED: transcription elongation factor B... 172 3e-41 ref|XP_002314149.1| predicted protein [Populus trichocarpa] gi|2... 170 1e-40 ref|NP_001235513.1| uncharacterized protein LOC100305702 [Glycin... 170 1e-40 ref|NP_001236759.1| uncharacterized protein LOC100500097 [Glycin... 167 6e-40 >ref|XP_002520493.1| Transcription elongation factor B polypeptide, putative [Ricinus communis] gi|223540335|gb|EEF41906.1| Transcription elongation factor B polypeptide, putative [Ricinus communis] Length = 98 Score = 174 bits (440), Expect = 9e-42 Identities = 86/95 (90%), Positives = 90/95 (94%) Frame = +3 Query: 39 MNKEETVKLISAEGFEFVIDKKAAMVSQTIRNMLTSPGSFSETQHGVVRFPEISTTILEK 218 M KE+TVKLISAEGFEFVIDK+AAMVSQTIRNMLTSPGSF+ETQHG V FPEISTTILEK Sbjct: 1 MRKEDTVKLISAEGFEFVIDKEAAMVSQTIRNMLTSPGSFAETQHGEVTFPEISTTILEK 60 Query: 219 ICQYFYWSLQFASGKETEFHIEPELTLELMMAANY 323 ICQYFYWSLQ+A GKETEF IEPELTLELMMAANY Sbjct: 61 ICQYFYWSLQYAKGKETEFPIEPELTLELMMAANY 95 >ref|XP_002282124.1| PREDICTED: transcription elongation factor B polypeptide 1 [Vitis vinifera] Length = 98 Score = 172 bits (436), Expect = 3e-41 Identities = 85/95 (89%), Positives = 90/95 (94%) Frame = +3 Query: 39 MNKEETVKLISAEGFEFVIDKKAAMVSQTIRNMLTSPGSFSETQHGVVRFPEISTTILEK 218 M KE+TVKLISAEGFEFVIDK+AAMVSQTIRNMLTSPGSF+E +HG V FPEISTTILEK Sbjct: 1 MRKEDTVKLISAEGFEFVIDKRAAMVSQTIRNMLTSPGSFAEREHGEVTFPEISTTILEK 60 Query: 219 ICQYFYWSLQFASGKETEFHIEPELTLELMMAANY 323 ICQYFYWSLQFASGK+TEF IEPELTLELMMAANY Sbjct: 61 ICQYFYWSLQFASGKDTEFPIEPELTLELMMAANY 95 >ref|XP_002314149.1| predicted protein [Populus trichocarpa] gi|222850557|gb|EEE88104.1| predicted protein [Populus trichocarpa] Length = 98 Score = 170 bits (431), Expect = 1e-40 Identities = 84/95 (88%), Positives = 90/95 (94%) Frame = +3 Query: 39 MNKEETVKLISAEGFEFVIDKKAAMVSQTIRNMLTSPGSFSETQHGVVRFPEISTTILEK 218 M KE+TVKLISAEGFEFVI K+AAMVSQTIRNMLTSPGSF+ET+HG V FPEISTTILEK Sbjct: 1 MRKEDTVKLISAEGFEFVIHKEAAMVSQTIRNMLTSPGSFAETEHGEVTFPEISTTILEK 60 Query: 219 ICQYFYWSLQFASGKETEFHIEPELTLELMMAANY 323 ICQYFYWSLQ+A+GKETEF IEPELTLELMMAANY Sbjct: 61 ICQYFYWSLQYANGKETEFPIEPELTLELMMAANY 95 >ref|NP_001235513.1| uncharacterized protein LOC100305702 [Glycine max] gi|255626357|gb|ACU13523.1| unknown [Glycine max] Length = 98 Score = 170 bits (430), Expect = 1e-40 Identities = 84/95 (88%), Positives = 88/95 (92%) Frame = +3 Query: 39 MNKEETVKLISAEGFEFVIDKKAAMVSQTIRNMLTSPGSFSETQHGVVRFPEISTTILEK 218 M KE+TVKLISAEGFEFV+DK+AAMVSQTI NMLTSPGSF+E QHG V FPEISTTILEK Sbjct: 1 MKKEDTVKLISAEGFEFVVDKEAAMVSQTIHNMLTSPGSFAERQHGEVTFPEISTTILEK 60 Query: 219 ICQYFYWSLQFASGKETEFHIEPELTLELMMAANY 323 ICQYFYW LQFASGKETEF IEPELTLELMMAANY Sbjct: 61 ICQYFYWHLQFASGKETEFPIEPELTLELMMAANY 95 >ref|NP_001236759.1| uncharacterized protein LOC100500097 [Glycine max] gi|255629123|gb|ACU14906.1| unknown [Glycine max] Length = 98 Score = 167 bits (424), Expect = 6e-40 Identities = 82/95 (86%), Positives = 88/95 (92%) Frame = +3 Query: 39 MNKEETVKLISAEGFEFVIDKKAAMVSQTIRNMLTSPGSFSETQHGVVRFPEISTTILEK 218 M KE+TVKLIS+EGFEFV+DK+AA+VSQTI NMLTSPGSF+E QHG V FPEISTTILEK Sbjct: 1 MKKEDTVKLISSEGFEFVVDKEAAIVSQTIHNMLTSPGSFAERQHGEVTFPEISTTILEK 60 Query: 219 ICQYFYWSLQFASGKETEFHIEPELTLELMMAANY 323 ICQYFYW LQFASGKETEF IEPELTLELMMAANY Sbjct: 61 ICQYFYWHLQFASGKETEFSIEPELTLELMMAANY 95