BLASTX nr result

ID: Coptis21_contig00009653 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009653
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003557017.1| PREDICTED: uncharacterized protein LOC100801...   135   4e-30
emb|CAN76439.1| hypothetical protein VITISV_001759 [Vitis vinifera]   135   4e-30
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]   131   6e-29
emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]   130   8e-29
gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157...   129   2e-28

>ref|XP_003557017.1| PREDICTED: uncharacterized protein LOC100801364 [Glycine max]
          Length = 890

 Score =  135 bits (339), Expect = 4e-30
 Identities = 61/92 (66%), Positives = 78/92 (84%)
 Frame = -2

Query: 277 RYFLIFVDDYSRMTWVYFLKEKLETFSVFKRFKALVEMQSGCTIKVIRSDRGGEYTSQEF 98
           RYF++F+DD+S+MTWVYFLKE+ + F VF++FKAL E QSG  IKV+ S+RG EYTS+EF
Sbjct: 254 RYFILFIDDFSKMTWVYFLKERSDVFGVFRKFKALAENQSGKRIKVLTSNRGKEYTSREF 313

Query: 97  EAFCKVEGIWKQLTASYSPQRNNVAERKNRTI 2
           E FCK EGI +QLT +YSPQ+N V+ERKNRT+
Sbjct: 314 ERFCKDEGIERQLTVAYSPQQNGVSERKNRTV 345


>emb|CAN76439.1| hypothetical protein VITISV_001759 [Vitis vinifera]
          Length = 808

 Score =  135 bits (339), Expect = 4e-30
 Identities = 64/92 (69%), Positives = 74/92 (80%)
 Frame = -2

Query: 277 RYFLIFVDDYSRMTWVYFLKEKLETFSVFKRFKALVEMQSGCTIKVIRSDRGGEYTSQEF 98
           RYF+ F+DDYSR TWVYFL+EK E FS FK FK LVE ++G  IK+ RSDRGGEYTSQEF
Sbjct: 60  RYFITFIDDYSRKTWVYFLQEKSEAFSTFKSFKMLVEKEAGKPIKIFRSDRGGEYTSQEF 119

Query: 97  EAFCKVEGIWKQLTASYSPQRNNVAERKNRTI 2
             FC+  GI KQL A+YSPQ+N V+ERKNRTI
Sbjct: 120 VNFCENHGIQKQLIAAYSPQQNGVSERKNRTI 151


>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score =  131 bits (329), Expect = 6e-29
 Identities = 58/92 (63%), Positives = 75/92 (81%)
 Frame = -2

Query: 277 RYFLIFVDDYSRMTWVYFLKEKLETFSVFKRFKALVEMQSGCTIKVIRSDRGGEYTSQEF 98
           RYFL+F DD+SRM+WVYFL+ K ETF  FK+FKA VE QSG  IKV+R+DRGGE+ S +F
Sbjct: 518 RYFLLFTDDHSRMSWVYFLQSKAETFETFKKFKAFVEKQSGKCIKVLRTDRGGEFLSNDF 577

Query: 97  EAFCKVEGIWKQLTASYSPQRNNVAERKNRTI 2
           + FC+ EG+ ++LT  YSP++N VAERKNRT+
Sbjct: 578 KVFCEEEGLHRELTTPYSPEQNGVAERKNRTV 609


>emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]
          Length = 1424

 Score =  130 bits (328), Expect = 8e-29
 Identities = 55/92 (59%), Positives = 77/92 (83%)
 Frame = -2

Query: 277 RYFLIFVDDYSRMTWVYFLKEKLETFSVFKRFKALVEMQSGCTIKVIRSDRGGEYTSQEF 98
           +YF++F+DD++RMTWV+F+K+K E FS+FK+FK+ VE QSGC IK +RSDRG EYTS +F
Sbjct: 612 KYFVLFIDDFTRMTWVFFMKQKSEVFSIFKKFKSFVEKQSGCYIKTLRSDRGMEYTSSQF 671

Query: 97  EAFCKVEGIWKQLTASYSPQRNNVAERKNRTI 2
             FC+ EG+ +QLT +Y+PQ+N V ERKN+T+
Sbjct: 672 GNFCEDEGVERQLTVAYTPQQNGVVERKNQTV 703


>gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157|gb|ACN78980.1|
           copia-type polyprotein [Glycine max]
          Length = 1042

 Score =  129 bits (324), Expect = 2e-28
 Identities = 61/92 (66%), Positives = 72/92 (78%)
 Frame = -2

Query: 277 RYFLIFVDDYSRMTWVYFLKEKLETFSVFKRFKALVEMQSGCTIKVIRSDRGGEYTSQEF 98
           +YFL+F+DDYSR TWVYFLK+K E F  FK FKALVE +SG  IK +RSDRGGE+TS+EF
Sbjct: 238 KYFLLFIDDYSRKTWVYFLKQKSEAFVAFKNFKALVEKESGYVIKALRSDRGGEFTSKEF 297

Query: 97  EAFCKVEGIWKQLTASYSPQRNNVAERKNRTI 2
             FC+  GI + LT   SPQ+N VAERKNRTI
Sbjct: 298 NEFCEKYGIRRPLTVPRSPQQNGVAERKNRTI 329


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