BLASTX nr result

ID: Coptis21_contig00009631 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00009631
         (730 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADC94857.1| DRE transcription factor 2 [Vitis pseudoreticulata]    153   3e-35
ref|XP_003635449.1| PREDICTED: ethylene-responsive transcription...   153   3e-35
gb|ADC94856.1| DRE transcription factor 1 [Vitis pseudoreticulata]    151   2e-34
ref|XP_002310574.1| AP2/ERF domain-containing transcription fact...   129   6e-28
gb|ADZ28107.1| ethylene response factor 4 [Malus x domestica]         127   3e-27

>gb|ADC94857.1| DRE transcription factor 2 [Vitis pseudoreticulata]
          Length = 248

 Score =  153 bits (387), Expect = 3e-35
 Identities = 87/164 (53%), Positives = 110/164 (67%), Gaps = 12/164 (7%)
 Frame = +3

Query: 3   DKAAFKLRGEFARLNFPHLRHEGSL-----GDYKPLHSSVDAKLEAICQSL----KEGNA 155
           DKAAFKLRGEFARLNFP+LRH+GSL     GDYKPLHSSVDAKL+AICQ+L    K+GN+
Sbjct: 92  DKAAFKLRGEFARLNFPNLRHQGSLVAGEFGDYKPLHSSVDAKLQAICQNLAISQKQGNS 151

Query: 156 SKPXXXXXXXXXXXXXXQASVPNVMEVVENSCNGEMGFLGSEDIKVE---NTTTPSQSDT 326
            KP              ++S      V++NS + E GFLG ED KVE   ++++PS SD 
Sbjct: 152 GKP------GLVSDAKIESSTHQAEMVLDNSSDPESGFLGLEDCKVEISSSSSSPSPSDE 205

Query: 327 DVVLVSSPESDVSKFQEFTDMPWNDSDNFSLHKYPSFDVDWEAI 458
                SSPESD+S F +FTD  WNDS+  +L K+PS ++DW +I
Sbjct: 206 SSAGSSSPESDIS-FLDFTDSQWNDSECLTLEKFPSVEIDWASI 248


>ref|XP_003635449.1| PREDICTED: ethylene-responsive transcription factor RAP2-4-like
           [Vitis vinifera]
          Length = 374

 Score =  153 bits (387), Expect = 3e-35
 Identities = 87/164 (53%), Positives = 110/164 (67%), Gaps = 12/164 (7%)
 Frame = +3

Query: 3   DKAAFKLRGEFARLNFPHLRHEGSL-----GDYKPLHSSVDAKLEAICQSL----KEGNA 155
           DKAAFKLRGEFARLNFP+LRH+GSL     GDYKPLHSSVDAKL+AICQ+L    K+GN+
Sbjct: 218 DKAAFKLRGEFARLNFPNLRHQGSLVAGEFGDYKPLHSSVDAKLQAICQNLAISQKQGNS 277

Query: 156 SKPXXXXXXXXXXXXXXQASVPNVMEVVENSCNGEMGFLGSEDIKVE---NTTTPSQSDT 326
            KP              ++S      V++NS + E GFLG ED KVE   ++++PS SD 
Sbjct: 278 GKP------GLVADAKIESSTHQAEMVLDNSSDPESGFLGLEDCKVEISSSSSSPSPSDE 331

Query: 327 DVVLVSSPESDVSKFQEFTDMPWNDSDNFSLHKYPSFDVDWEAI 458
                SSPESD+S F +FTD  WNDS+  +L K+PS ++DW +I
Sbjct: 332 SSAGSSSPESDIS-FLDFTDSQWNDSECLTLEKFPSVEIDWASI 374


>gb|ADC94856.1| DRE transcription factor 1 [Vitis pseudoreticulata]
          Length = 379

 Score =  151 bits (381), Expect = 2e-34
 Identities = 86/164 (52%), Positives = 109/164 (66%), Gaps = 12/164 (7%)
 Frame = +3

Query: 3   DKAAFKLRGEFARLNFPHLRHEGSL-----GDYKPLHSSVDAKLEAICQSL----KEGNA 155
           DKAAFKLRGEFARLNFP+LRH+GSL     GDYKPLHSSVDAKL+AICQ+L    K+GN+
Sbjct: 223 DKAAFKLRGEFARLNFPNLRHQGSLVAGEFGDYKPLHSSVDAKLQAICQNLAISQKQGNS 282

Query: 156 SKPXXXXXXXXXXXXXXQASVPNVMEVVENSCNGEMGFLGSEDIKVE---NTTTPSQSDT 326
            KP              ++S      V++NS + E GFLG ED KVE   ++++PS SD 
Sbjct: 283 GKP------GLVSDAKIESSTHQAEMVLDNSSDPESGFLGLEDCKVEISSSSSSPSPSDE 336

Query: 327 DVVLVSSPESDVSKFQEFTDMPWNDSDNFSLHKYPSFDVDWEAI 458
                SSPESD+S   +FTD  WNDS+  +L K+PS ++DW +I
Sbjct: 337 SSAGSSSPESDIS-LLDFTDSQWNDSECLTLEKFPSVEIDWASI 379


>ref|XP_002310574.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|118486817|gb|ABK95243.1| unknown
           [Populus trichocarpa] gi|222853477|gb|EEE91024.1|
           AP2/ERF domain-containing transcription factor [Populus
           trichocarpa]
          Length = 373

 Score =  129 bits (324), Expect = 6e-28
 Identities = 75/162 (46%), Positives = 100/162 (61%), Gaps = 10/162 (6%)
 Frame = +3

Query: 3   DKAAFKLRGEFARLNFPHLRHEGS-----LGDYKPLHSSVDAKLEAICQSL---KEGNAS 158
           DKAA+KLRGEFARLNFPHLRH+G+      GDYKPLHSSVDAKL+AICQSL   K+G   
Sbjct: 215 DKAAYKLRGEFARLNFPHLRHQGAHVSGEFGDYKPLHSSVDAKLQAICQSLGLQKQGETG 274

Query: 159 KPXXXXXXXXXXXXXXQASVPNVMEVVENSCNGEMGFLGSEDIKVE-NTTTPSQSDTDVV 335
           +P              Q  + +    ++     E   LG E+ KVE  + +P+ SD  + 
Sbjct: 275 EPCSVSDSKKTVSAPLQVKIEDDCS-LQGELKREFENLGVEEFKVEIPSPSPALSDESLA 333

Query: 336 LVSSPESDVSKFQEFTD-MPWNDSDNFSLHKYPSFDVDWEAI 458
             SSPES++S F  F+D + W++ +NF L KYPS ++DW +I
Sbjct: 334 GSSSPESEISFF--FSDSLQWDEFENFGLEKYPSVEIDWSSI 373


>gb|ADZ28107.1| ethylene response factor 4 [Malus x domestica]
          Length = 323

 Score =  127 bits (318), Expect = 3e-27
 Identities = 76/168 (45%), Positives = 99/168 (58%), Gaps = 16/168 (9%)
 Frame = +3

Query: 3   DKAAFKLRGEFARLNFPHLRHEGSL-----GDYKPLHSSVDAKLEAICQSL-----KEGN 152
           DKAAFKLRG+FARLNFPHLRH+G+L     G YKPLHSSVDAKL+AICQSL     K+GN
Sbjct: 176 DKAAFKLRGDFARLNFPHLRHQGALVCGDFGHYKPLHSSVDAKLQAICQSLGANSTKQGN 235

Query: 153 ASKPXXXXXXXXXXXXXXQASVPNVMEVVENSCNGEMGFLGSEDIKVE------NTTTPS 314
             +P                 V     VV      +M      ++K E      ++ +PS
Sbjct: 236 TGEP---------------CPVAETKPVVSAPLEAKMDDSFKSELKSESEAFSSSSYSPS 280

Query: 315 QSDTDVVLVSSPESDVSKFQEFTDMPWNDSDNFSLHKYPSFDVDWEAI 458
           +SD      SSPESD++ F +F+D  W++++NF L KYPS ++DW AI
Sbjct: 281 RSDES----SSPESDIT-FLDFSDSQWDEAENFGLEKYPSVEIDWSAI 323


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